CK937934

Overview
NameCK937934
Unique NameCK937934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_METRJ (Anthranilate phosphoribosyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.533e-21
Identity = 61/130 (46.92%), Postives = 77/130 (59.23%), Query Frame = 3
Query:  255 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            L  AEA+A+ D LL+ E       AFL  L+ +GE+  EIVG A AM    T+V    +AVD+VGTGGD + +VN+ST A+I+ AACG  VAK             DVL ALGV + LDP    RC+DEA
Sbjct:   17 LDRAEARAAFDDLLSGEVTPVQAGAFLTALKVRGESVEEIVGAAEAMRARMTRVAAPENAVDVVGTGGDHSGSVNVSTLAAIVVAACGVPVAKHGNRAATSRSGAADVLAALGVRLGLDPAAQARCLDEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.533e-21
Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            E I  L    DL+  EA+A+L+ +L+ A++  I  FL+ L+AKGE   EIVG  R M K    ++       VD  GTGGDG NT+N+ST A+I+ AA G  VAK             DVLEALG+ +DL PE VR+ +++
Sbjct:    6 EYIKKLEEGCDLSSEEAEAALEEVLSTAEDGEIETFLLALKAKGEKPQEIVGFVRGMKKAGNMIKPNTPFRIVDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMTGSSDVLEALGIKVDLSPEYVRKTIEK 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.002e-21
Identity = 61/143 (42.66%), Postives = 80/143 (55.94%), Query Frame = 3
Query:  216 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            F  +I  + +   LT  EA ++ D +++ +A  + + A L+ LR +GET  EI G    M      V+   DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV EA
Sbjct:    4 FKAIIAKVATGATLTRDEAASAFDGMMSGDATPSQMGALLMGLRVRGETVDEITGAVSTMRAKMLTVDAPADAVDIVGTGGDGSGSVNVSTCASFIVAGCGVPVAKHGNRALSSKSGAADVLNALGVRIDITPEHVGRCVTEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_METSB (Anthranilate phosphoribosyltransferase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.002e-21
Identity = 60/140 (42.86%), Postives = 79/140 (56.43%), Query Frame = 3
Query:  225 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            L+  L +   LT+AEA  + D +    A  A + AFL+ LR +GET  EIVG   AM     +V+   DA+DIVGTGGDG +T N+ST A+++ +ACG  VAK             DVL ALGV I LD   V  C++ A
Sbjct:    7 LLGKLATGASLTQAEATRAFDLIFEGAATPAQLGAFLMALRVRGETIDEIVGAVAAMRARMLRVDAPADAMDIVGTGGDGHSTYNVSTLAALIVSACGVPVAKHGNRAASSQSGASDVLSALGVKIGLDSREVEACLEAA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.615e-21
Identity = 60/143 (41.96%), Postives = 80/143 (55.94%), Query Frame = 3
Query:  216 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            F  +I  + +   LT  EA A+ D +++ EA  + + A L+ LR +GET  EI G   AM      V    DAVD+VGTGGDG+ +VN+ST A+ + A CG  VAK             DVL ALGV ID+ P+ V RC+ EA
Sbjct:    4 FKSIIGKVATGATLTRDEATAAFDAMMSGEATPSQMGALLMGLRVRGETVDEIAGAVSAMRAKMLTVTAPPDAVDVVGTGGDGSGSVNVSTCAAFIVAGCGAPVAKHGNRALSSRSGAADVLAALGVKIDITPDQVGRCIAEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPA (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.461e-21
Identity = 61/143 (42.66%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  216 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            F  +I  + +   LT  EA  + D +++ +A  + + A L+ LR +GET  EI G    M      V    DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV+EA
Sbjct:    4 FKSIIAKVATGATLTRDEATDAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLPVTAPADAVDIVGTGGDGSGSVNVSTCASFVVAGCGVTVAKHGNRALSSKSGAADVLAALGVKIDITPEQVGRCVNEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHILW (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.461e-21
Identity = 60/134 (44.78%), Postives = 77/134 (57.46%), Query Frame = 3
Query:  243 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GET  EIVG   AM      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EA
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVTAMRSKMLTVEAPEDAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_GEOMG (Anthranilate phosphoribosyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.461e-21
Identity = 62/148 (41.89%), Postives = 83/148 (56.08%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV---EGLGDA------------VDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCV 632
            ++ R+DLTEAE    +D +++ EA  A I++F+  LR KGET  EI G AR M   AT +   +G+ D             +D+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D+ PE V   +
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGEATPAQIASFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVSLDVTPETVENAI 156          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPB (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21
Identity = 59/143 (41.26%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  216 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            F  +I  L + V L+  E+  + D +++ EA  + + A L+ LR +GET  EI G   AM     +V    DAVD+VGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV ID+ P  V RC+ EA
Sbjct:    4 FKSIIGKLATGVTLSREESAGAFDAMMSGEATPSQMGALLMALRVRGETVEEITGAVAAMRSKMLRVTAPADAVDVVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVKIDITPAEVGRCIKEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PELPD (Anthranilate phosphoribosyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21
Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDI---------------VGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCV 632
            ++ + DLTE E    +  ++  EA  A I AF+  LR KGET  EI G AR M ++AT++    D +DI               VGTGGDG NT N+ST  + + +ACG KVAK             DVLE LGV +D+ PE V +C+
Sbjct:    9 IVEQKDLTEGEMIEVMGQIMTGEATPAQIGAFITALRMKGETIDEITGAARVMREHATRIRAGKDLLDIDRDDINIDRETILDVVGTGGDGTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSLCGSADVLEKLGVNLDITPETVEQCI 156          
The following BLAST results are available for this feature:
BLAST of CK937934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METRJ1.533e-2146.92Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_METMA1.533e-2142.55Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_RHOPS2.002e-2142.66Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_METSB2.002e-2142.86Anthranilate phosphoribosyltransferase OS=Methyloc... [more]
TRPD_RHOP52.615e-2141.96Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHOPA4.461e-2142.66Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHILW4.461e-2144.78Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_GEOMG4.461e-2141.89Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_RHOPB5.826e-2141.26Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_PELPD5.826e-2139.86Anthranilate phosphoribosyltransferase OS=Pelobact... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004480_B03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937934 ID=CK937934; Name=CK937934; organism=Citrus sinensis; type=EST; length=641bp
GGGGAACAACAATGACTTTGNNNNNNTTGTTGAATTTAACTGCAGTTTCT
TCCTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTC
GCTTCGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAG
AATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGT
CCTCTAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGT
GGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATG
AAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAA
GGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTA
TGCTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAG
GAGGTGACGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTT
GCTGCAGCTTGTGGTACAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTC
TTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTG
ACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCA
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