CK937934

Overview
NameCK937934
Unique NameCK937934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_METBF (Anthranilate phosphoribosyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.435e-19
Identity = 56/131 (42.75%), Postives = 74/131 (56.49%), Query Frame = 3
Query:  252 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            DL+  EA+ ++  +L+ A +  I  FL+ LRAKGE   EI G  R M K    +        VD  GTGGDG NT+NIST A+I+ AA G  VAK             DVL+ALG+  DL+PE VR+ ++E
Sbjct:   13 DLSPEEAEDAVGKILSTAQDEEIGRFLLALRAKGEKPEEIAGFVRGMKKAGKTIRPKTSFRLVDTCGTGGDGLNTINISTAAAIVTAAAGVPVAKHGNRAATSMSGSSDVLDALGIKTDLEPEAVRQTIEE 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_DEHSC (Anthranilate phosphoribosyltransferase OS=Dehalococcoides sp. (strain CBDB1) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.435e-19
Identity = 57/140 (40.71%), Postives = 78/140 (55.71%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            E I  L+    LT  ++ + +D ++  +   A I AFL  LR KGET  EI GLA  M   +T++      +DIVG GGDG NT NIST A+ + +  G KVAK             DVLEALG+ IDL+ E V+ C+++
Sbjct:    4 EAIGSLVLGKSLTLEQSASVMDEIMEGKTTPAQIGAFLTALRVKGETAEEIAGLANVMRAKSTRISTSTPVLDIVGIGGDGINTFNISTTAAFVISGAGIKVAKHGNRAASSMCGSADVLEALGIKIDLNAEQVKICIEQ 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_DEHE1 (Anthranilate phosphoribosyltransferase OS=Dehalococcoides ethenogenes (strain 195) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.435e-19
Identity = 57/140 (40.71%), Postives = 78/140 (55.71%), Query Frame = 3
Query:  222 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            E I  L+    LT  ++ + +D ++  +   A I AFL  LR KGET  EI GLA  M   +T++      +DIVG GGDG NT NIST A+ + +  G KVAK             DVLEALG+ IDL+ E V+ C+++
Sbjct:    4 EAIGSLVLGKSLTLEQSASVMDEIMEGKTTPAQIGAFLTALRVKGETAEEIAGLANVMRAKSTRISTSTPVLDIVGIGGDGINTFNISTTAAFVISGAGIKVAKHGNRAASSMCGSADVLEALGIKIDLNAEQVKICIEQ 143          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_CLOTH (Anthranilate phosphoribosyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.435e-19
Identity = 59/139 (42.45%), Postives = 79/139 (56.83%), Query Frame = 3
Query:  228 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV-EGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            I  L+   +L+E+E   +LD ++  +A  A I +F+  LR KGET  EI G A+ M   A K+   +   +D  GTGGDG NT NIST  + +AAA G  VAK             DVLEALGV IDLDP  V+ C+++
Sbjct:    6 ISKLVEGKNLSESEIIEALDCIMEGKATPAQIGSFITALRIKGETIEEITGCAKVMRAKADKICPNVDYYIDTCGTGGDGTNTFNISTATAFVAAAGGVYVAKHGNRSVSSKSGSADVLEALGVNIDLDPVQVKECIEK 144          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_RHILO (Anthranilate phosphoribosyltransferase OS=Rhizobium loti GN=trpD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.874e-19
Identity = 54/130 (41.54%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  255 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            L+  EA+ + D +++ +A    I  FL+ LR +GET  EI G    M     +VE    A+DIVGTGGD +++VNISTG++ + AA G  VAK             DVL ALGV ID+ P+ + RC+ EA
Sbjct:   17 LSFEEAREAFDIIMSGDATPGQIGGFLMALRVRGETVSEISGAVATMRAKMLRVEAPAGAIDIVGTGGDNSHSVNISTGSAFVIAAAGVPVAKHGNRGLSSLTGAADVLIALGVKIDIPPDAIGRCIHEA 146          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.874e-19
Identity = 59/145 (40.69%), Postives = 77/145 (53.10%), Query Frame = 3
Query:  252 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDI---------------VGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            DL+E E    ++ +++ E   A I +F+  LR KGET  EI G AR M + AT +    + +DI               VGTGGDG NT NIST  S + +ACG KVAK             DVLE LGV +D+ PE V RC++E
Sbjct:   14 DLSEGEMIEVMNQIMSGECTPAQIGSFITALRMKGETIAEISGAARVMRERATPIRVGRNVLDIDRDDINLDQETILDVVGTGGDGTNTFNISTTVSFIVSACGVKVAKHGNRSVSSACGSADVLEKLGVNLDVTPEQVERCINE 158          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_VIBHB (Anthranilate phosphoribosyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19
Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  219 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDE 638
            N +I  L  +  LT+ E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R+ VDE
Sbjct:    6 NPIITKLYEQESLTQEESQQLFDIIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRKAVDE 147          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19
Identity = 56/136 (41.18%), Postives = 77/136 (56.62%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVD 635
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D
Sbjct:   10 IVGQLDLTTEEMRDVMRQIMTGQCTEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCID 145          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA7 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19
Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = 3
Query:  237 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVD 635
            +++++DLT  E QA +  ++     +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGRCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCID 145          
BLAST of CK937934 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA6 (Anthranilate phosphoribosyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 3
Query:  300 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGTKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEA 641
            + D  ++S+ L  L+ KGET  EI G A AMI+ A+ V+    D  DIVGTGGDG NT+NIS+ A+I+AA+CG KVAK             D+  A G+ +D+ P   R C+D+A
Sbjct:   31 QVDNIILSSLLTALKIKGETPEEIAGAATAMIQNASPVKRPEYDFADIVGTGGDGHNTINISSAAAIVAASCGVKVAKHGNRSVSSKSGSADLFNAFGMKLDMSPAAARECLDKA 145          
The following BLAST results are available for this feature:
BLAST of CK937934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METBF1.435e-1942.75Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_DEHSC1.435e-1940.71Anthranilate phosphoribosyltransferase OS=Dehaloco... [more]
TRPD_DEHE11.435e-1940.71Anthranilate phosphoribosyltransferase OS=Dehaloco... [more]
TRPD_CLOTH1.435e-1942.45Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_RHILO1.874e-1941.54Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_GEOLS1.874e-1940.69Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_VIBHB2.448e-1940.14Anthranilate phosphoribosyltransferase OS=Vibrio h... [more]
TRPD_PSEPU2.448e-1941.18Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEA72.448e-1941.18Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEA62.448e-1944.35Anthranilate phosphoribosyltransferase OS=Pseudoal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004480_B03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937934 ID=CK937934; Name=CK937934; organism=Citrus sinensis; type=EST; length=641bp
GGGGAACAACAATGACTTTGNNNNNNTTGTTGAATTTAACTGCAGTTTCT
TCCTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTC
GCTTCGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAG
AATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGT
CCTCTAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGT
GGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATG
AAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAA
GGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTA
TGCTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAG
GAGGTGACGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTT
GCTGCAGCTTGTGGTACAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTC
TTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTG
ACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCA
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