CK937878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_CHICK (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gallus gallus GN=UQCRFS1 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26 Identity = 66/169 (39.05%), Postives = 95/169 (56.21%), Query Frame = 3 Query: 297 ESLTPRN-EESLVPGV----PATVAAVKNPTSKIVYDEYNHERYPPGDPS-------KRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 ES++ R+ LV G+ PA+V V N + + Y E S ++ F+Y V A + ++ +F+ S+SAS DVLA++ +E+ LS I G V KWRGKP+F+R RT+ +I VD+ LRDPQ D +RVK PEW+++VGVCTHLG Sbjct: 51 ESMSGRSARRDLVAGISLNAPASVRYVHNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISSLSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDPQHDLDRVKKPEWVILVGVCTHLG 219
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_CERAE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cercopithecus aethiops GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.192e-26 Identity = 64/152 (42.11%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 339 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSK---------RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 VPA+V + T V D Y++ R D +K + F+Y V A + ++ +F+ SMSAS DVLAMA +E++LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 72 VPASVCY--SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEEEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_THEGE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Theropithecus gelada GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.738e-26 Identity = 63/152 (41.45%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 339 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSK---------RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 VPA+V + T V D Y++ R D +K + F+Y V A + + +F+ SMSAS DVLAMA +E++LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++G+CTHLG Sbjct: 72 VPASVCY--SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGICTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_PONPY (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pongo pygmaeus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26 Identity = 54/113 (47.79%), Postives = 79/113 (69.91%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + ++ +FV SMSAS DVLA+A +E+ LS I G +T KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNVVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_COLPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Colobus polykomos GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26 Identity = 55/113 (48.67%), Postives = 78/113 (69.03%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 ++++F+Y V A + + +FV SMSAS DVLAMA +EV LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKSFSYMVTAVTTVGVAYAAKNAVTQFVSSMSASADVLAMAKIEVKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_LAGLA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Lagothrix lagotricha GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V + ++ +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTAATAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_AOTAZ (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Aotus azarai GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V + ++ +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTATTAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRIL_HUMAN (Cytochrome b-c1 complex subunit Rieske-like protein 1 OS=Homo sapiens GN=UQCRFSL1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 54/113 (47.79%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++IK +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 118 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLG 230
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_SAISC (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saimiri sciureus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.420e-25 Identity = 51/113 (45.13%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V + ++ +F+ SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKVFSYMVTATTAVGVTYAAKSIVTQFISSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_HYLSY (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Hylobates syndactylus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKRPEWVILIGVCTHLG 221 The following BLAST results are available for this feature:
BLAST of CK937878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937878 ID=CK937878; Name=CK937878; organism=Citrus sinensis; type=EST; length=768bpback to top |