CK937878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_BOVIN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Bos taurus GN=UQCRFS1 PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_PANTR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan troglodytes GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.165e-25 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_PANPA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan paniscus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.165e-25 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_HUMAN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo sapiens GN=UQCRFS1 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.165e-25 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_GORGO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla gorilla gorilla GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.165e-25 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RAT (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus GN=Uqcrfs1 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + + +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_MOUSE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus GN=Uqcrfs1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.398e-25 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 +++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I +V++ LRDPQ D +RVK PEW++++GVCTHLG Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLG 221
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RHORU (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodospirillum rubrum GN=petA PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 393 EYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLG 767 E H PG S R F++ G V A + L + F+ M+ + D LA+AS EVD+S+I G +TV WRGKPVF+R RT+++I +A +VD SLRDPQ D RV+ +WLV+VGVCTHLG Sbjct: 3 EAEHTASTPGGESSRRD--FLIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLG 125
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RICBR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia bellii (strain RML369-C) GN=petA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.797e-20 Identity = 55/128 (42.97%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 390 DEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLG 767 D N + D SK + F++ V A + + S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V + L DP++D +RVK + WLV +G+CTHLG Sbjct: 6 DTNNDNKVEFEDRSKTSRRDFMVLTASSVAAVGAACTLWPLINSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTHLG 133
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RICTY (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia typhi GN=petA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19 Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 3 Query: 519 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLG 767 S++ S DVLA++S+EVDLSSI G TVTVKW+GKP+FI RT + I A +V + L DP++D RVK + WLV +G+CTHLG Sbjct: 40 SLNPSTDVLALSSIEVDLSSIAIGQTVTVKWQGKPIFITNRTPDGIASARAVKMSELIDPEKDEVRVKAGHDNWLVTIGICTHLG 124 The following BLAST results are available for this feature:
BLAST of CK937878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937878 ID=CK937878; Name=CK937878; organism=Citrus sinensis; type=EST; length=768bpback to top |