CK937878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19 Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = 3 Query: 519 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLG 767 S + S DVLA++S+EVDLS+I G TVTVKW+GKP+FI RT ++I A +V + L DP++D RVK + WLV +G+CTHLG Sbjct: 40 SFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTHLG 124
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RHOCA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter capsulatus GN=petA PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19 Identity = 54/102 (52.94%), Postives = 66/102 (64.71%), Query Frame = 3 Query: 522 MSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNP--------------------EWLVVVGVCTHLG 767 M+AS DV AMAS+ VD+S++E G+ +TVKWRGKPVFIRRR E+DI+LA SV LG+LRD AE P EWLV++GVCTHLG Sbjct: 38 MNASADVKAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRD--TSAENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLG 137
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_PARDE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus denitrificans GN=petA PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.987e-19 Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRD-----------PQQDAERVKNP--EWLVVVGVCTHLG 767 ++R F Y+ G V A ++ M+ S DV A+AS++VD+S +E G+ +TVKW GKPVFIRRRTE++I+ VDLG L D P D R + EWLV++GVCTHLG Sbjct: 14 TRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQLIDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLG 136
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19 Identity = 47/85 (55.29%), Postives = 61/85 (71.76%), Query Frame = 3 Query: 519 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLG 767 S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V + L DP+ D RVK + WLV +G+CTHLG Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLG 124
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19 Identity = 47/85 (55.29%), Postives = 61/85 (71.76%), Query Frame = 3 Query: 519 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLG 767 S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V + L DP+ D RVK + WLV +G+CTHLG Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTHLG 124
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 429 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRD--------------PQQDAERVKNPEWLVVVGVCTHLG 767 ++R F Y+ G V + + M+ S DV A+AS+ VD+SS+EPG +TVK+ GKP+FIRRRTE DI+L SV LG L D Q+ + EWLV+ GVCTHLG Sbjct: 10 TRRDFLYYATAGAGAVATGAA---VWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLG 133
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.056e-16 Identity = 50/117 (42.74%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 426 PSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLG 767 P++R F FV TG L F+ M+ +A A +EVDLS I G + V WRGKP++I RT++ I A +V++ SL DPQ D RVK + +WLVV+G+CTHLG Sbjct: 10 PTRRDFL-FVATGAAAAVGGAAALW--PFISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDEARVKSGHEQWLVVIGICTHLG 123
BLAST of CK937878 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.614e-15 Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 423 DPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLG 767 + ++R F Y V A+ + + F+ M+ +A A +++D+S + G V V WRGKP+FIR RT ++I+ + D+G+L DPQ D+ RVK EWLVV CTHLG Sbjct: 8 EATRRDFLYVATAA---VGAAGVAAVAWPFITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGALIDPQPDSARVKPGKAEWLVVYASCTHLG 122 The following BLAST results are available for this feature:
BLAST of CK937878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937878 ID=CK937878; Name=CK937878; organism=Citrus sinensis; type=EST; length=768bpback to top |