CK937871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: SDCS_STAAM (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.884e-21 Identity = 49/123 (39.84%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 270 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ 638 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIK 181
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: SDCS_STAAC (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain COL) GN=sdcS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.884e-21 Identity = 49/123 (39.84%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 270 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ 638 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIK 181
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: SDCS_STAAB (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sdcS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.884e-21 Identity = 49/123 (39.84%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 270 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ 638 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIK 181
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: SDCS_STAA8 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain NCTC 8325) GN=sdcS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.884e-21 Identity = 49/123 (39.84%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 270 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ 638 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIK 181
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: SDCS_STAA3 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain USA300) GN=sdcS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.884e-21 Identity = 49/123 (39.84%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 270 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ 638 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIK 181
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: S13A1_RAT (Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.884e-21 Identity = 46/122 (37.70%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 279 VLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 644 +L + +W+TEA+P+ IT++ P +FP+FGI S+ VA +Y D L++G LA ++E +N+HKR+AL + ++ +NP L LG +TAF+SMW+ N + A ++MP+ + Q + Sbjct: 40 ILFVIATFWITEALPLSITALLPGLMFPMFGIMSSTHVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALRMVMMV---GVNPAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIVEAVAQQI 158
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: S13A1_HUMAN (Solute carrier family 13 member 1 OS=Homo sapiens GN=SLC13A1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 45/118 (38.14%), Postives = 76/118 (64.41%), Query Frame = 3 Query: 291 VFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 644 V +WLTEA+P+ +T++ P + P+FGI + VA +Y D L++G LA ++E +N+HKR+AL + ++ +NP L LG +TAF+SMW+ N + A ++MP+A ++Q + Sbjct: 44 VATFWLTEALPLSVTALLPSLMLPMFGIMPSKKVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALKMVMMV---GVNPAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIAEAVVQQI 158
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: INDY1_DROME (Protein I'm not dead yet OS=Drosophila melanogaster GN=Indy PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.311e-20 Identity = 52/145 (35.86%), Postives = 83/145 (57.24%), Query Frame = 3 Query: 213 LCAVICVCVKLDGQATSRNMLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALN-ITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 644 L ++C+ V L + + +L + +W+TEA+P+ +TSM P+ FP+ GI S+D Y D + + +G ++ALAVE+ N+HKRLAL I I+ C +P L G+ T F+SMW+ N A +M P+ +L+ L Sbjct: 48 LVPLLCLPVMLLNEGAEFRCMYLLLVMAIFWVTEALPLYVTSMIPIVAFPIMGIMSSDQTCRLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGC----SPRRLHFGLIMVTMFLSMWISNAACTAMMCPIIQAVLEEL 188
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: S13A1_MOUSE (Solute carrier family 13 member 1 OS=Mus musculus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20 Identity = 45/122 (36.89%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 279 VLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 644 +L + +W+TEA+P+ IT++ P +FP+FGI + VA +Y D L++G LA ++E +N+HKR+AL + ++ +NP L LG +TAF+SMW+ N + A ++MP+ + Q + Sbjct: 40 ILFVIAIFWITEALPLSITALLPGLMFPMFGIMRSSQVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALRMVMMV---GVNPAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIVEAVAQQI 158
BLAST of CK937871 vs. ExPASy Swiss-Prot
Match: S13A3_MOUSE (Solute carrier family 13 member 3 OS=Mus musculus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.920e-20 Identity = 47/124 (37.90%), Postives = 78/124 (62.90%), Query Frame = 3 Query: 273 LGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL 644 L V+ + +W TEA+P+ +T++ P+ LFP GI + V Y D L L I+A A+E +N+H+R+AL + +L + P L+LG+ TT+F+SMW+ N A+ +M+P+A+ IL++L Sbjct: 42 LYVILLMAVYWCTEALPLSVTALLPIILFPFMGILPSSKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKVLMLV---GVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIASAILKSL 162 The following BLAST results are available for this feature:
BLAST of CK937871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937871 ID=CK937871; Name=CK937871; organism=Citrus sinensis; type=EST; length=645bpback to top |