CK937858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937858 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.010e-11 Identity = 55/166 (33.13%), Postives = 79/166 (47.59%), Query Frame = 3 Query: 336 GVGILG-------IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLG-AICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 809 G+G+LG I AFG I +Y ISG HINPAVT GL+ +K + Y++AQ LG A F++ + G GA G + AE +GTF+L+ T+ +R+ + A + IG V + ITG+ +NPAR+FG Sbjct: 45 GIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTIGNITGSSLNPARTFG 205
BLAST of CK937858 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.319e-11 Identity = 55/162 (33.95%), Postives = 77/162 (47.53%), Query Frame = 3 Query: 345 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAV 818 + G+A A +LV +SGGH+NPAVT L ++ R+ LY+ AQ L + C ++ GG A + L G GL EII TF L++ V++ DP+ S VP PL G V +A +G +NPARSFG A+ Sbjct: 58 LAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLT-------GGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPR-----SSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPAL 207
BLAST of CK937858 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.723e-11 Identity = 52/161 (32.30%), Postives = 71/161 (44.10%), Query Frame = 3 Query: 345 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN 827 +L A A G + L C ISG HINPAVT L + R +S IRA +Y+ AQC G I G + Y A + G E I TF++V F +TDP + + + IG A ++P +NPARS G + + N Sbjct: 99 LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLGPSFVLN 250
BLAST of CK937858 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.723e-11 Identity = 60/173 (34.68%), Postives = 78/173 (45.09%), Query Frame = 3 Query: 312 NLNTDQCGGVGI-LGIAWAFGGMIFILVYCTAGISGGHINPAVT-----FGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 809 N+ GG+G I AF I ++Y ISG HINPAVT G F GR+V + Y+VAQ +GA G A GG GA G G + E IGTF+L+ + +R+ P A L IG V + ITG+ +NPAR+FG Sbjct: 44 NIGIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREV-----VPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFG 206
BLAST of CK937858 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 50/175 (28.57%), Postives = 76/175 (43.43%), Query Frame = 3 Query: 336 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYY-------NRYGGGANELA----------DGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 809 G+ + I W G + + +Y +AG+SG H+NPAV+ L+L + Y+ AQ GA C V S + N G + LA + G E++ T +L+ + + TD LAPL IG + ++ A P+TG +NPAR FG Sbjct: 43 GLWEISIIWGVG--VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRG---PLAPLLIGLLIAVIGSAMGPLTGFAMNPARDFG 212
BLAST of CK937858 vs. ExPASy Swiss-Prot
Match: GLPF_HAEIN (Glycerol uptake facilitator protein OS=Haemophilus influenzae GN=glpF PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 55/180 (30.56%), Postives = 81/180 (45.00%), Query Frame = 3 Query: 336 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVT-----FGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGAN---------ELADGYNK--------GTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 809 G+ + I W G + + VY TAG+SG H+NPAVT F F G+KV + Y+++Q LGA V A ++ + Y N LA ++ G E + T +L+ + + TD LAPL IG + ++ A P+TG +NPAR FG Sbjct: 38 GLWEISIMWGMG--VALAVYATAGLSGAHLNPAVTIALWKFACFDGKKV-----IPYIISQMLGAFFAAALVYALYRNVFIDYETVHNIVRGTQESLSLAGTFSTYPHPSLSIGGAFAVEFVITAILMALIMALTDDGNGVPRG---PLAPLLIGILIAVIGGAMGPLTGFAMNPARDFG 207
BLAST of CK937858 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 58/227 (25.55%), Postives = 93/227 (40.97%), Query Frame = 3 Query: 153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY 824 +D H+P P D F + +IAEF+ + +N V + GIA +G I +L+Y ISG HINPAVT + L + Y+++Q +G+ ++ ++ G + G+ L A E I TF L++ + R+ + LA L IG V + L P++ +NP RS G A++Y Sbjct: 32 EDIHNPRPLKKQDSLLSVSVPFLQKLIAEFLGTYFLVFTGCASVV---------VNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNRA-----IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVY 244
BLAST of CK937858 vs. ExPASy Swiss-Prot
Match: AQP3_RAT (Aquaporin-3 OS=Rattus norvegicus GN=Aqp3 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11 Identity = 54/179 (30.17%), Postives = 73/179 (40.78%), Query Frame = 3 Query: 342 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGT----------------GLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPI-------TGTGINPARSFG 809 G L I AFG + + + +SG H+NPAVTF + + I+ +Y +AQ LGA G G V F Y + NEL GT G + IGT L+ V + DP + P+P G F V L + I +G +NPAR FG Sbjct: 55 GFLTINLAFGFAVTLAILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPIYTLAQTLGAFLGAGIV--FGLYYDAIWAFAGNELVVSGPNGTAGIFATYPSGHLDMVNGFFDQFIGTAALIVCVLAIVDPYNN----------PVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFG 221 The following BLAST results are available for this feature:
BLAST of CK937858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937858 ID=CK937858; Name=CK937858; organism=Citrus sinensis; type=EST; length=828bpback to top |