CK937857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_PONAB (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pongo abelii GN=IDH1 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.441e-63 Identity = 65/98 (66.33%), Postives = 76/98 (77.55%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P +K V+NF GGVA+ MY Sbjct: 86 FKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMY 183 HSP 2 Score: 111.309 bits (277), Expect = 1.441e-63 Identity = 49/76 (64.47%), Postives = 65/76 (85.53%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +VEM GDEMTR+ W+ IK+KLIFP++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV++ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEE 85 HSP 3 Score: 30.4166 bits (67), Expect = 1.441e-63 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N D+SI FA +S A K WPLY Sbjct: 184 NQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_SHEEP (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovis aries GN=IDH1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.443e-63 Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P KT V+NFT GGVA+ M+ Sbjct: 86 FKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEICYTPSDGSPKTVYLVHNFTESGGVAMGMF 183 HSP 2 Score: 107.842 bits (268), Expect = 2.443e-63 Identity = 47/76 (61.84%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +VEM GDEMTR+ W+ IK+KLIFP+++LD+ +DL + NRDAT+D+VT ++AEA KYNV +KCATITPDE RV++ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVDLDLHSYDLSIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEE 85 HSP 3 Score: 31.187 bits (69), Expect = 2.443e-63 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N D+SI FA +S A K WPLY Sbjct: 184 NQDKSIEDFAHSSFQMALSKNWPLY 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_HUMAN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens GN=IDH1 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 5.391e-63 Identity = 65/98 (66.33%), Postives = 76/98 (77.55%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P +K V+NF GGVA+ MY Sbjct: 86 FKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMY 183 HSP 2 Score: 109.383 bits (272), Expect = 5.391e-63 Identity = 48/76 (63.16%), Postives = 65/76 (85.53%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +VEM GDEMTR+ W+ IK+KLIFP++ELD+ +DLG+ NRDAT+D+VT ++AEA K+NV +KCATITPDE RV++ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDEKRVEE 85 HSP 3 Score: 30.4166 bits (67), Expect = 5.391e-63 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N D+SI FA +S A K WPLY Sbjct: 184 NQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDH2_CANTR (Isocitrate dehydrogenase [NADP] peroxisomal OS=Candida tropicalis GN=IDP2 PE=1 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 5.794e-63 Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MW SPNGT+RN++ GTVFREPI+ N+PR++P W KPI IGRHAFGDQY+ATD VI G LKLVF P+ E E VY F G GVALSMY Sbjct: 89 FNLKKMWLSPNGTLRNVIGGTVFREPIVIDNIPRIVPSWEKPIIIGRHAFGDQYKATDVVIPAAGDLKLVFKPKDGGEVQEFPVYQFDGP-GVALSMY 185 HSP 2 Score: 129.798 bits (325), Expect = 5.794e-63 Identity = 59/86 (68.60%), Postives = 72/86 (83.72%), Query Frame = 3 Query: 177 QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS 434 QKI V NPIVEMDGDEMTR+ W+ IKDKLI P+L +D+KY+DLG+ RD TDDKVT ++AEA L+Y V +KCATITPDEARVK+ + Sbjct: 5 QKITVKNPIVEMDGDEMTRIIWQFIKDKLILPYLNVDLKYYDLGIEYRDKTDDKVTTDAAEAILQYGVGVKCATITPDEARVKEFN 90
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.019e-63 Identity = 65/98 (66.33%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ F P+ +K V++F GGVA+ MY Sbjct: 86 FKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITFTPKDGSQKVTYLVHSFEEGGGVAMGMY 183 HSP 2 Score: 108.997 bits (271), Expect = 7.019e-63 Identity = 48/76 (63.16%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV++ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEE 85 HSP 3 Score: 30.4166 bits (67), Expect = 7.019e-63 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N D+SI FA +S A K WPLY Sbjct: 184 NQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.549e-62 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ MY Sbjct: 86 FKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHDFEEGGGVAMGMY 183 HSP 2 Score: 108.997 bits (271), Expect = 1.549e-62 Identity = 48/76 (63.16%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV++ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEE 85 HSP 3 Score: 30.4166 bits (67), Expect = 1.549e-62 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N D+SI FA +S A K WPLY Sbjct: 184 NQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.549e-62 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ MY Sbjct: 86 FKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGTQKVTYMVHDFEEGGGVAMGMY 183 HSP 2 Score: 108.997 bits (271), Expect = 1.549e-62 Identity = 48/76 (63.16%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV++ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEE 85 HSP 3 Score: 30.4166 bits (67), Expect = 1.549e-62 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N D+SI FA +S A K WPLY Sbjct: 184 NQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.549e-62 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ MY Sbjct: 86 FKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHSFEEGGGVAMGMY 183 HSP 2 Score: 108.997 bits (271), Expect = 1.549e-62 Identity = 48/76 (63.16%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV++ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEE 85 HSP 3 Score: 30.4166 bits (67), Expect = 1.549e-62 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N D+SI FA +S A K WPLY Sbjct: 184 NQDKSIEDFAHSSFQMALSKGWPLY 208
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_YEAST (Isocitrate dehydrogenase [NADP], mitochondrial OS=Saccharomyces cerevisiae GN=IDP1 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.538e-62 Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 3 Query: 156 TKKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS 434 T + AF KIKV P+VE+DGDEMTR+ W IK KLI P+L++D+KY+DL + +RDAT DK+T ++AEA KY V IKCATITPDEARVK+ + Sbjct: 11 TSRLAAFSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEFN 103 HSP 2 Score: 125.946 bits (315), Expect = 7.538e-62 Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKD--EKTELEVYNFTGEGGVALSMY 721 F L +MWKSPNGTIRNIL GTVFREPI+ +PRL+P W KPI IGRHA GDQY+ATDT+I GPG L+LV+ P + L+VY++ G GVA++MY Sbjct: 102 FNLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSDPTTAQPQTLKVYDYKG-SGVAMAMY 200 HSP 3 Score: 27.7202 bits (60), Expect = 7.538e-62 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 NTDESI FA +S A KK L+ Sbjct: 201 NTDESIEGFAHSSFKLAIDKKLNLF 225
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_DICDI (Isocitrate dehydrogenase [NADP], mitochondrial OS=Dictyostelium discoideum GN=idhM PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.272e-61 Identity = 64/98 (65.31%), Postives = 78/98 (79.59%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL+GTVFR PIICKN+P L+PGW KPI IGRHA GDQY+ATD V+ GPGKL+++F P + E + +Y+F G GVA+ MY Sbjct: 109 FGLKEMWKSPNGTIRNILDGTVFRGPIICKNLPLLVPGWKKPIIIGRHAHGDQYKATDFVVNGPGKLEMIFTP-SQGEPIKKVIYDFKG-SGVAMGMY 204 HSP 2 Score: 119.783 bits (299), Expect = 5.272e-61 Identity = 51/84 (60.71%), Postives = 71/84 (84.52%), Query Frame = 3 Query: 177 QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 ++IKV P+VEMDGDE TR+ W+SIK KLIFP++++ +Y+DLGLPNRDAT+D+VT+++A A + + +KCATITPDEARVK+ Sbjct: 25 KRIKVTGPVVEMDGDEQTRIMWESIKSKLIFPYVDITPEYYDLGLPNRDATNDQVTIDAANAIKRAKIGVKCATITPDEARVKE 108 The following BLAST results are available for this feature:
BLAST of CK937857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937857 ID=CK937857; Name=CK937857; organism=Citrus sinensis; type=EST; length=799bpback to top |