CK937857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_YEAST (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Saccharomyces cerevisiae GN=IDP2 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 8.965e-61 Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL GTVFREPII +PRL+P W KPI IGRHAFGDQY+ATD ++ G+L+LV+ + +L+V+++ GGVA+ MY Sbjct: 86 FHLKKMWKSPNGTIRNILGGTVFREPIIIPRIPRLVPQWEKPIIIGRHAFGDQYKATDVIVPEEGELRLVYKSKSGTHDVDLKVFDYPEHGGVAMMMY 183 HSP 2 Score: 126.331 bits (316), Expect = 8.965e-61 Identity = 57/83 (68.67%), Postives = 72/83 (86.75%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 KIKVANPIVEMDGDE TR+ W I+DKL+ P+L++D+KY+DL + RD T+D+VTV+SA ATLKY VA+KCATITPDEARV++ Sbjct: 3 KIKVANPIVEMDGDEQTRIIWHLIRDKLVLPYLDVDLKYYDLSVEYRDQTNDQVTVDSATATLKYGVAVKCATITPDEARVEE 85
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDH_MYCTU (Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis GN=icd PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.029e-60 Identity = 59/98 (60.20%), Postives = 69/98 (70.41%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MW SPNGTIRNIL GT+FREPI+ NVPRL+PGWTKPI IGRHAFGDQYRAT+ + PG + L F P E+ + +GGV L MY Sbjct: 89 FNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMY 186 HSP 2 Score: 118.242 bits (295), Expect = 3.029e-60 Identity = 52/85 (61.18%), Postives = 71/85 (83.53%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS 434 KIKV+ P+VE+DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A K+ V +KCATITPDEARV++ + Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFN 90 HSP 3 Score: 29.6462 bits (65), Expect = 3.029e-60 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N ESIR FA AS + KWP+Y Sbjct: 187 NFKESIRDFARASFSYGLNAKWPVY 211
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDH_MYCBO (Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis GN=icd PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.029e-60 Identity = 59/98 (60.20%), Postives = 69/98 (70.41%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MW SPNGTIRNIL GT+FREPI+ NVPRL+PGWTKPI IGRHAFGDQYRAT+ + PG + L F P E+ + +GGV L MY Sbjct: 89 FNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMY 186 HSP 2 Score: 118.242 bits (295), Expect = 3.029e-60 Identity = 52/85 (61.18%), Postives = 71/85 (83.53%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS 434 KIKV+ P+VE+DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A K+ V +KCATITPDEARV++ + Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFN 90 HSP 3 Score: 29.6462 bits (65), Expect = 3.029e-60 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 N ESIR FA AS + KWP+Y Sbjct: 187 NFKESIRDFARASFSYGLNAKWPVY 211
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_DICDI (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium discoideum GN=idhC PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.474e-59 Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRN L GT+FREPI+CKNVPRL+ W K I IGRHAFGDQYRATD V++G GKL+L + P + +V++F +GGVAL MY Sbjct: 87 FGLKEMWKSPNGTIRNTLGGTLFREPIVCKNVPRLVTCWNKSIVIGRHAFGDQYRATDFVVKGAGKLELTYTPADGSAPQKFQVFDFPSDGGVALGMY 184 HSP 2 Score: 99.7525 bits (247), Expect = 1.474e-59 Identity = 46/84 (54.76%), Postives = 63/84 (75.00%), Query Frame = 3 Query: 177 QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKD 428 +KI V+NP+ + GDE TRV W I+ KLIFPFL+L ++ +DLG+ RD T+D+VT+++A A + V IKCATITPDEARV + Sbjct: 3 EKIIVSNPVANLLGDEQTRVIWDLIEKKLIFPFLDLKVETYDLGIEYRDKTNDQVTIDAANAIKRLKVGIKCATITPDEARVTE 86 HSP 3 Score: 35.039 bits (79), Expect = 1.474e-59 Identity = 15/25 (60.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 723 NTDESIRAFAEASMNTAYQKKWPLY 797 NTD SI+ FA A N + KKWPLY Sbjct: 185 NTDASIKEFAYACFNFSLDKKWPLY 209
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_TOBAC (Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.839e-48 Identity = 88/98 (89.80%), Postives = 92/98 (93.88%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK MW+SPNGTIRNILNGTVFREPI+CKN+PRL+PGWTKPICIGRHAFGDQYRATDTVIQG GKLKLVFVPEG DEKTE EVYNFTG GGVALSMY Sbjct: 88 FNLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIQGAGKLKLVFVPEGTDEKTEFEVYNFTGAGGVALSMY 185 HSP 2 Score: 183.341 bits (464), Expect = 1.309e-45 Identity = 112/214 (52.34%), Postives = 124/214 (57.94%), Query Frame = 3 Query: 168 MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS*NRCGRVQMGQSGIF*MALFSENQSFAKMSLGLFQAGQSPYALAGMLLVINIEQLIQLFKDLANLNWCLYQR---EKMRRQS*RFTTL-RVRVELHCPCINTDESIRAFAEASMNTAYQKKWPLY 797 M F KIKV NPIVEMDGDEMTRV WKSIKDKLI PFLELDIKYFDLGLP+RDATDDKVTVESAEAT KYNVAIKCATITPDEARVK+ + R G K L P + + + L EK + FT V + ++ NTDES+R+FAEASMN AYQKKWPLY Sbjct: 1 MTFDKIKVENPIVEMDGDEMTRVIWKSIKDKLICPFLELDIKYFDLGLPHRDATDDKVTVESAEATQKYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIQGAGKLKLVFVPEGTDEKTEFEVYNFTGAGGVALSMY----NTDESVRSFAEASMNMAYQKKWPLY 210
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_MEDSA (Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.078e-47 Identity = 87/98 (88.78%), Postives = 94/98 (95.92%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK MW+SPNGTIRNILNGTVFREPIICKN+PRLIPGWTKPICIGRHAFGDQYRATD+VI+GPGKLKLVFVPEG+ E T+LEVYNFTGEGGVAL+MY Sbjct: 109 FGLKSMWRSPNGTIRNILNGTVFREPIICKNIPRLIPGWTKPICIGRHAFGDQYRATDSVIKGPGKLKLVFVPEGQGETTDLEVYNFTGEGGVALAMY 206 HSP 2 Score: 178.333 bits (451), Expect = 4.211e-44 Identity = 106/214 (49.53%), Postives = 116/214 (54.21%), Query Frame = 3 Query: 156 TKKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS*NRCGRVQMGQSGIF*MALFSENQSFAKMSLGLFQAGQSPYALAGMLLVINIEQLIQLFKDLANLNWCLYQREKMRRQS*RFTTLRVRVELHCPCINTDESIRAFAEASMNTAYQKKWPLY 797 T M FQKIKVANPIVEMDGDEMTR+ WK IKDKLIFPF+ELDIKYFDLGLP RD T+DKVTVESAEATLKYNVAIKCATITPDEARVK+ R G K L P + + K L + + NTDESIR+FAEASM A +KKWPLY Sbjct: 18 TTATMGFQKIKVANPIVEMDGDEMTRIIWKYIKDKLIFPFVELDIKYFDLGLPYRDETNDKVTVESAEATLKYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIICKNIPRLIPGWTKPICIGRHAFGDQYRATDSVIKGPGKLKLVFVPEGQGETTDLEVYNFTGEGGVALAMYNTDESIRSFAEASMAVALEKKWPLY 231
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHC_SOLTU (Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.078e-47 Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK MW+SPNGTIRNILNGTVFREPI+CKN+PRL+PGWTKPICIGRHAFGDQYRATDTVI+G GKLKLVFVPEG DEKTE EVYNFTG GGVALSMY Sbjct: 88 FNLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVFVPEGSDEKTEFEVYNFTGAGGVALSMY 185 HSP 2 Score: 182.956 bits (463), Expect = 1.710e-45 Identity = 112/214 (52.34%), Postives = 124/214 (57.94%), Query Frame = 3 Query: 168 MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS*NRCGRVQMGQSGIF*MALFSENQSFAKMSLGLFQAGQSPYALAGMLLVINIEQLIQLFKDLANLNWCLYQR---EKMRRQS*RFTTL-RVRVELHCPCINTDESIRAFAEASMNTAYQKKWPLY 797 MAFQKI V NPIVEMDGDEMTRV WKSIKDKLI PFLELDIKYF LGLP+RDATDDKVTVESAEAT KYNVAIKCATITPDEARVK+ + R G K L P + + K L EK + FT V + ++ NTDES+R+FAEASMN A+QKKWPLY Sbjct: 1 MAFQKITVQNPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFSLGLPHRDATDDKVTVESAEATQKYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVFVPEGSDEKTEFEVYNFTGAGGVALSMY----NTDESVRSFAEASMNMAFQKKWPLY 210
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_MOUSE (Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus GN=Idh2 PE=1 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 8.860e-34 Identity = 68/98 (69.39%), Postives = 75/98 (76.53%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL GTVFREPIICKN+PRL+PGWTKPI IGRHA GDQY+ATD V+ G KLVF P+ E EVYNF GGV + MY Sbjct: 126 FKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKLVFTPKDGSSAKEWEVYNFPA-GGVGMGMY 222 HSP 2 Score: 134.42 bits (337), Expect = 6.974e-31 Identity = 86/226 (38.05%), Postives = 127/226 (56.19%), Query Frame = 3 Query: 159 KKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS*NRCGRVQMGQ------SGIF*MALFSEN-----QSFAK-MSLGLFQAGQSPYALAGMLLVINIEQLIQLFKDLANL-NWCLYQREKMRRQS*RFTTLRVRVELHCPCINTDESIRAFAEASMNTAYQKKWPLY 797 ++ A ++IKV P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD T+D+VT++SA AT KY+VA+KCATITPDEARV++ + + G +F + +N + K +++G G A ++ +L+ KD ++ W +Y F V + ++ NTDESI FA + + QKKWPLY Sbjct: 36 RRHYAEKRIKVEKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKLVFTPKDGSSAKEWEVY----------NFPAGGVGMGMY----NTDESISGFAHSCFQYSIQKKWPLY 247
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDHP_RAT (Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus GN=Idh2 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.511e-33 Identity = 68/98 (69.39%), Postives = 75/98 (76.53%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL GTVFREPIICKN+PRL+PGWTKPI IGRHA GDQY+ATD V+ G KLVF P+ E EVYNF GGV + MY Sbjct: 126 FKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGMFKLVFTPKDGSGAKEWEVYNFPA-GGVGMGMY 222 HSP 2 Score: 134.806 bits (338), Expect = 5.340e-31 Identity = 86/226 (38.05%), Postives = 127/226 (56.19%), Query Frame = 3 Query: 159 KKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS*NRCGRVQMGQ------SGIF*MALFSEN-----QSFAK-MSLGLFQAGQSPYALAGMLLVINIEQLIQLFKDLANL-NWCLYQREKMRRQS*RFTTLRVRVELHCPCINTDESIRAFAEASMNTAYQKKWPLY 797 ++ A ++IKV P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD T+D+VT++SA AT KY+VA+KCATITPDEARV++ + + G +F + +N + K +++G G A ++ + +L+ KD + W +Y F V + ++ NTDESI FA + + QKKWPLY Sbjct: 36 RRHYAEKRIKVEKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGMFKLVFTPKDGSGAKEWEVY----------NFPAGGVGMGMY----NTDESISGFAHSCFQYSIQKKWPLY 247
BLAST of CK937857 vs. ExPASy Swiss-Prot
Match: IDH_SPHYA (Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.265e-28 Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 428 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSMY 721 F LK+MWKSPNGTIRNIL G VFREPI+ KNVPRL+PGWT PI +GRHAFGDQY+ATD + G G L + +V E+ E EV+ F GVA+ MY Sbjct: 86 FGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDPIVVGRHAFGDQYKATDFKVPGAGTLTMKWVGT-NGEELEYEVFEFP-SAGVAMGMY 181 HSP 2 Score: 120.939 bits (302), Expect = 7.979e-27 Identity = 71/215 (33.02%), Postives = 110/215 (51.16%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKDLS*NRCGRVQMGQSGIF*MALFSENQSFAKMSLGLFQAGQSPYALAGMLLVINIEQLIQLFK---------DLANLNWCLYQREKMRRQS*RFTTLRVRVELHCPCINTDESIRAFAEASMNTAYQKKWPLY 797 KIKV NP+VE+DGDEMTR+ W+ I+++LI P+L++D+KY+DL + RD T D++T+++A A +Y V +KCATITPDEARV++ + + G + K L P +V+ +K + W E++ + F + V + ++ N DESIR FA+AS N + WP+Y Sbjct: 3 KIKVKNPVVEIDGDEMTRIIWEWIRERLILPYLDVDLKYYDLSVEKRDETSDQITIDAANAIKEYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDP-------IVVGRHAFGDQYKATDFKVPGAGTLTMKWVGTNGEELEYEVFEFPSAGVAMGMY----NLDESIRDFAKASFNYGLNRGWPVY 206 The following BLAST results are available for this feature:
BLAST of CK937857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937857 ID=CK937857; Name=CK937857; organism=Citrus sinensis; type=EST; length=799bpback to top |