CK937823

Overview
NameCK937823
Unique NameCK937823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STAAE (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Newman) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++  ++  R SI+WSR+ PNG   G VN KG+ +Y+ L  E     ++PFVT+ H+D P+ L  D G FL+ + +  F DYAE CFKEF + VK+W T NE     +  Y  G   P
Sbjct:   60 LELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STAAC (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain COL) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++  ++  R SI+WSR+ PNG   G VN KG+ +Y+ L  E     ++PFVT+ H+D P+ L  D G FL+ + +  F DYAE CFKEF + VK+W T NE     +  Y  G   P
Sbjct:   60 LELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STAAB (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++  ++  R SI+WSR+ PNG   G VN KG+ +Y+ L  E     ++PFVT+ H+D P+ L  D G FL+ + +  F DYAE CFKEF + VK+W T NE     +  Y  G   P
Sbjct:   60 LELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STAA9 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH9) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++  ++  R SI+WSR+ PNG   G VN KG+ +Y+ L  E     ++PFVT+ H+D P+ L  D G FL+ + +  F DYAE CFKEF + VK+W T NE     +  Y  G   P
Sbjct:   60 LELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STAA8 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain NCTC 8325) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++  ++  R SI+WSR+ PNG   G VN KG+ +Y+ L  E     ++PFVT+ H+D P+ L  D G FL+ + +  F DYAE CFKEF + VK+W T NE     +  Y  G   P
Sbjct:   60 LELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STAA3 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain USA300) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++  ++  R SI+WSR+ PNG   G VN KG+ +Y+ L  E     ++PFVT+ H+D P+ L  D G FL+ + +  F DYAE CFKEF + VK+W T NE     +  Y  G   P
Sbjct:   60 LELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STAA2 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH1) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++  ++  R SI+WSR+ PNG   G VN KG+ +Y+ L  E     ++PFVT+ H+D P+ L  D G FL+ + +  F DYAE CFKEF + VK+W T NE     +  Y  G   P
Sbjct:   60 LELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_STAA1 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++  ++  R SI+WSR+ PNG   G VN KG+ +Y+ L  E     ++PFVT+ H+D P+ L  D G FL+ + +  F DYAE CFKEF + VK+W T NE     +  Y  G   P
Sbjct:   60 LELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKD-GDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: LACG_LACAC (6-phospho-beta-galactosidase OS=Lactobacillus acidophilus GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSNNGYNKGTDAP 363
            +++ ++   +  R SI+WSR+ PNG   G V   G+ FY+ L  E  +  ++PFVT+ H+D P+ L +D G FL+   + DF +YA+ CFKEF + VK+WIT+NE  S + + Y  G   P
Sbjct:   60 LELAEKFGGNVIRISIAWSRIFPNG--DGEVKPNGVDFYHKLFAECDARHVEPFVTLHHFDTPEGLHED-GDFLTHEKMDDFVEYADYCFKEFPE-VKYWITINEIRSVAVDQYIIGNFPP 176
[Close]
BLAST of CK937823 vs. ExPASy Swiss-Prot
Match: BGLH_BACSU (Aryl-phospho-beta-D-glucosidase bglH OS=Bacillus subtilis GN=bglH PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 40/105 (38.10%), Postives = 69/105 (65.71%), Query Frame = 1 
Query:    1 VKIMKEMNLDAFRFSISWSRLLPNGKLSGGVNNKGISFYNNLINELLSNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNE 315
            + +  EM   AFR SI+W+R+ PNG      N +G+ FY++L +ELL + ++P VTI H+++P  L  +YGG+ + +++  ++ YA+  FK +  +VK+W+T NE
Sbjct:   72 IALFAEMGFKAFRTSIAWTRIFPNGD-EEEPNEEGLRFYDDLFDELLKHHIEPVVTISHYEMPLGLVKNYGGWKNRKVIEFYERYAKTVFKRYQHKVKYWMTFNE 175
The following BLAST results are available for this feature:
BLAST of CK937823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
LACG_STAAE9.605e-1939.676-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAC9.605e-1939.676-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAB9.605e-1939.676-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA99.605e-1939.676-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA89.605e-1939.676-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA39.605e-1939.676-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA29.605e-1939.676-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA19.605e-1939.676-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_LACAC9.605e-1939.676-phospho-beta-galactosidase OS=Lactobacillus acid... [more]
BGLH_BACSU9.605e-1938.10Aryl-phospho-beta-D-glucosidase bglH OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_D06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937823 ID=CK937823; Name=CK937823; organism=Citrus sinensis; type=EST; length=400bp
GTGAAGATTATGAAGGAAATGAATTTGGATGCTTTCAGATTCTCCATCTC
CTGGTCTAGATTATTACCAAATGGAAAGCTAAGTGGTGGAGTGAACAACA
AAGGCATTAGTTTCTACAATAATCTCATCAACGAGCTCCTCTCAAATGGA
TTGCAACCCTTTGTTACTATCTTTCACTGGGATCTTCCACAGGCCCTGGA
AGATGACTATGGTGGCTTTTTAAGCCCTCGCATTGTGGCTGATTTTCAAG
ACTATGCGGAGCTTTGCTTCAAAGAATTTGGTGATCGCGTAAAGCATTGG
ATCACTTTAAATGAGCCACATTCATACAGTAATAATGGCTATAATAAGGG
TACCGATGCACCANNANNNNGTTCCAAATGGGTAAACAAAGCATGCCAGG
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