CK937797

Overview
NameCK937797
Unique NameCK937797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.417e-29
Identity = 65/165 (39.39%), Postives = 94/165 (56.97%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQ-SYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAH 727
            F+     RN     A GF+ Y +F+ A   Y    F TTG      +E+ AFLA    +T+ G+  A  GP +WG C+  E + +  +YC+   K  +PC  G +YYGRG I I +NYNYG  G+A+ +DLLN+P+ +  +AT++F+ A W WMTP +   PS H
Sbjct:   85 FDQMLLHRNDQACAAKGFYTYDAFVAAANAYPD--FATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEP--KPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTP-QSPKPSCH 244          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.088e-27
Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  233 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAH 727
            QFE     R+     A GF+ Y++F+ A   +    F  TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A+W WMT    S PS H
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPH 258          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.088e-27
Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  233 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAH 727
            QFE     R+     A GF+ Y++F+ A   +    F  TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A+W WMT    S PS H
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPH 258          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.088e-27
Identity = 61/166 (36.75%), Postives = 93/166 (56.02%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAH 727
            F+     RN     A  F+ Y +F+ A   +    F TTG    + +E+ AFLA    +T+ G+  A  GP +WG C+  E + +    YC  S ++  PC  G +YYGRG I I +NYNYG  G+A+ ++LL++P+ +  +AT++F+ A W WMTP +   PS H
Sbjct:   88 FDQMLLHRNDAACPAKNFYTYDAFVAAANAFP--SFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQW--PCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTP-QSPKPSCH 248          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27
Identity = 63/167 (37.72%), Postives = 89/167 (53.29%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMK-EICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEM--SPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAH 727
            F+     RN     A  F+ Y +F+ A   +   GF   G   D  K E+ AFLA    +T+ G+  A  GP AWG C+  E   +    YC  S ++  PC  G +YYGRG I + +N+NYG  G+A+ ADLL  P+ +  +AT++F+ A W WMTP +   PS H
Sbjct:   90 FDQMLLHRNDAACPASNFYTYDAFVAAASAFP--GFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQW--PCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTP-QSPKPSCH 251          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 57/166 (34.34%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQS-YCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHD 730
            F+  FS R      + GF+ Y SF+ A   +    FGT G    + +E+ AFLAH+   TS G       P AWGLC+ +  + +++ +C  S    +PC  G +Y  RG I +  N+NYG  G+A+  DL+ +P+ +E++  ++F+ A+W WM+    + PS HD
Sbjct:  139 FDQMFSHRKD--CPSQGFYSYHSFLVAAESFP--AFGTIGDVATRKREVAAFLAHISQATS-GERSDVENPHAWGLCHINTTTVTENDFCTSS---DWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQ-HDNKPSCHD 295          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.869e-20
Identity = 57/165 (34.55%), Postives = 79/165 (47.88%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHD 730
            FE+  S R         F+ Y +FI A   +    FGTTG    + +E+ AF      +T+ G+  A  GP AWG C  +E++PS                   YYGRG I +   YNY   G+AL  DL+N+P+ +  +  +AF  AIW WMT  +   PS HD
Sbjct:   36 FESMLSHRGDQGCQGA-FYTYDAFIKAAGDFPR--FGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------------PYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMT-AQSPKPSCHD 180          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20
Identity = 57/155 (36.77%), Postives = 80/155 (51.61%), Query Frame = 2
Query:  278 AVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHDAFV 739
            A GF+   +F+TA   Y    FG TG+  D  +EI AF AH   +T                CY  E+  PS++YCD++    +PC  G  YYGRG + I WN+NYG  G+++  D L  P+ + ++  LAF+ A+W W   V       HDAFV
Sbjct:   90 AKGFYTRDAFLTAAGGYP--SFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDET-STQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNV-------HDAFV 221          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20
Identity = 54/140 (38.57%), Postives = 75/140 (53.57%), Query Frame = 2
Query:  287 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPV 703
            F+  QSF+ A   Y   GF    T  D  +EI AF AHV  +T               +CY +E++  S  YCD + K  +PC PG +YYGRG + I WNYNYG  G+ +  D L  P+ + Q+ T++F+ A+W WM  V
Sbjct:  112 FYTRQSFLNAAHSYS--GFARDRTNDDSKREIAAFFAHVTHETG-------------HMCYINEINGASMDYCDKNNKQ-WPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNV 235          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.090e-19
Identity = 58/165 (35.15%), Postives = 83/165 (50.30%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHD 730
            F+     RN     AV F+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G  ++  GP A G C+  E +                  G  YYGRG I +    NY   G+A++ DL+N+P+ +  +AT++F+ AIW WMTP + + PS HD
Sbjct:   35 FDQMLKNRNDARCFAVRFYTYDAFIAAANSFP--GFGTTGDDTARKKEIAAFFGQTSHETTGGT-LSPDGPYAGGYCFLREGNQM----------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTP-QGNKPSCHD 179          
The following BLAST results are available for this feature:
BLAST of CK937797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHI3_ORYSJ4.417e-2939.39Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSJ1.088e-2738.18Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI1.088e-2738.18Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHI1_ORYSJ1.088e-2736.75Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI12_ORYSJ4.134e-2737.72Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
AGI_URTDI1.165e-2134.34Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHI11_ORYSJ2.869e-2034.55Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI6_ORYSJ3.748e-2036.77Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI5_ORYSJ3.748e-2038.57Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIT_PETHY1.090e-1935.15Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_H07 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937797 ID=CK937797; Name=CK937797; organism=Citrus sinensis; type=EST; length=739bp
AGGGAGATCTGGTGAGAACGAGAAAATGAAGATGAAGAATGGCAGTGTGG
CAATGACACTGACAGTGGCACTAGTACTGGCACTGGCAGTGAGTTTGGCA
AATGGAGATGAATCAGAGAAGGTGATAGTGAAGAAGTTGAAGGGGAAAAA
AGTTTGCATAAAAGGGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTA
ACGAGACGATATCAGACTATTTCCAGGTTTACCAGTTTGAGAATTTCTTC
TCGAAAAGGAACACGCCGGTGGCACATGCCGTGGGATTCTGGGATTATCA
GTCTTTCATTACTGCCACCGTCAAATATCAGCCCCTCGGCTTCGGTACCA
CCGGTACTAAGCTTGATAAGATGAAGGAGATTTGCGCTTTTCTTGCCCAC
GTGGGCTGCAAGACCTCTTGTGGATATGGAGTGGCCACTGGAGGACCATT
GGCCTGGGGACTTTGCTACAACCATGAAATGAGCCCCAGTCAGTCATATT
GTGATGATTCCTACAAATACACATATCCCTGCACCCCTGGAGCTGAGTAC
TATGGCCGAGGTGCTATACCTATATACTGGAACTATAACTATGGAGCCAC
TGGGGAAGCATTGAAGGCAGATCTGTTGAATCATCCCGAATACATTGAGC
AGAATGCTACCCTTGCCTTTGAGGCTGCAATTTGGAAGTGGATGACCCCA
GTCAAGAAATCNNNGCCTTCAGCCCATGATGCCTTTGTT
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