CK937793

Overview
NameCK937793
Unique NameCK937793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_BURCH (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain HI2424) GN=metK PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.938e-52
Identity = 112/217 (51.61%), Postives = 142/217 (65.44%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            +LFTSESV+EGHPDK+ DQISDA+LDA LEQD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DETPE MPL   L+ +L  R   +R++    WLRPD K+QVTV Y   DG   P  + TV++STQH   +    +   + E +IKP +P
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDN-LDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYV--DGK--PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLP 216          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_BURCC (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain MC0-3) GN=metK PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.938e-52
Identity = 112/217 (51.61%), Postives = 142/217 (65.44%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            +LFTSESV+EGHPDK+ DQISDA+LDA LEQD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DETPE MPL   L+ +L  R   +R++    WLRPD K+QVTV Y   DG   P  + TV++STQH   +    +   + E +IKP +P
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDN-LDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYV--DGK--PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLP 216          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_BURCA (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain AU 1054) GN=metK PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.938e-52
Identity = 112/217 (51.61%), Postives = 142/217 (65.44%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            +LFTSESV+EGHPDK+ DQISDA+LDA LEQD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DETPE MPL   L+ +L  R   +R++    WLRPD K+QVTV Y   DG   P  + TV++STQH   +    +   + E +IKP +P
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDN-LDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYV--DGK--PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLP 216          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_XYLFT (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.143e-52
Identity = 110/222 (49.55%), Postives = 147/222 (66.22%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRK--NSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QDP ++VACET  KT + ++ GEITT A VD E + R     IG+ S DVG D   C VL  I +QSPDI QGV     K+ E+ GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  NS   WLRPD K Q+T+ Y  +DG  V   +  V++STQHD  +   ++   ++E ++KPV+P
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSLLPWLRPDAKAQITLRY--EDG--VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLP 215          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_XYLFM (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain M12) GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.143e-52
Identity = 110/222 (49.55%), Postives = 147/222 (66.22%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRK--NSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QDP ++VACET  KT + ++ GEITT A VD E + R     IG+ S DVG D   C VL  I +QSPDI QGV     K+ E+ GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  NS   WLRPD K Q+T+ Y  +DG  V   +  V++STQHD  +   ++   ++E ++KPV+P
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSPLPWLRPDAKAQITLRY--EDG--VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLP 215          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_XYLFA (S-adenosylmethionine synthetase OS=Xylella fastidiosa GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.143e-52
Identity = 110/222 (49.55%), Postives = 147/222 (66.22%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRK--NSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QDP ++VACET  KT + ++ GEITT A VD E + R     IG+ S DVG D   C VL  I +QSPDI QGV     K+ E+ GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  NS   WLRPD K Q+T+ Y  +DG  V   +  V++STQHD  +   ++   ++E ++KPV+P
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSPLPWLRPDAKAQITLRY--EDG--VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLP 215          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_XYLF2 (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain M23) GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.143e-52
Identity = 110/222 (49.55%), Postives = 147/222 (66.22%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRK--NSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QDP ++VACET  KT + ++ GEITT A VD E + R     IG+ S DVG D   C VL  I +QSPDI QGV     K+ E+ GAGDQG MFGYAT+ET  +MP +  ++ +L  +  ++RK  NS   WLRPD K Q+T+ Y  +DG  V   +  V++STQHD  +   ++   ++E ++KPV+P
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILVQDPRARVACETMVKTGVAIIAGEITTSAWVDLEALTRKVIVDIGYNSSDVGFDGATCGVLNLIGKQSPDINQGVD---RKKAEEQGAGDQGLMFGYATNETDSYMPAAIHISHRLVEQQAKIRKKSNSLLPWLRPDAKAQITLRY--EDG--VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLP 215          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_RHOSR (S-adenosylmethionine synthetase OS=Rhodococcus sp. (strain RHA1) GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.143e-52
Identity = 118/224 (52.68%), Postives = 141/224 (62.95%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-HGHFTKRPE-------DIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKPVI 759
            LFTSESV EGHPDK+CD ISD++LDA L  DP ++VA ET   T  V V GE+TT A  D  KIVRDT   IG+ S   G D + C V V I  QSP+IAQGV H H  +  E         GAGDQG MFG+AT +TPE MPL   LA +L  RLTEVRK+    +LRPDGKTQVT+EY  D      VR+ TV+ISTQH   +  D  +  DL+E V+  V+
Sbjct:    8 LFTSESVTEGHPDKICDAISDSILDALLTDDPRARVAVETLVTTGQVHVAGEVTTSAYADIPKIVRDTVLEIGYDSSAKGFDGNSCGVNVAIGAQSPEIAQGVDHSHEVRTGELSDDEIDRQGAGDQGLMFGFATTDTPELMPLPIALAHRLSRRLTEVRKSGVLPYLRPDGKTQVTIEYDGDKA----VRLDTVVISTQHAADIDLDNLLTPDLREKVLGSVL 227          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.143e-52
Identity = 113/220 (51.36%), Postives = 146/220 (66.36%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            FLFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VA ET   T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV     +  +D    GAGDQG MFGYA DETPE MP     + +L  R +++R++    WLRPD K+QVTV Y   DG   P  V TV++STQH   +T  +I   + E +IKPV+P
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYSHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYV--DGR--PHSVDTVVLSTQHAPDITQAQIREAVIEEIIKPVLP 216          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_PSYA2 (S-adenosylmethionine synthetase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=metK PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.143e-52
Identity = 107/216 (49.54%), Postives = 145/216 (67.13%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT  V++ GEITT A +D E+IVRDT   IG+   D+G D + C V+  + +QSP+IAQGV       PE+ GAGDQG MFGYA++ET   MP     A +L  R +E+R+     WLRPD K Q+T++Y   DG+  PV +  V++STQHD +++  ++   + E +IK V+P
Sbjct:    6 LFTSESVSEGHPDKMADQISDAILDAILRQDLHARVACETLVKTGAVILAGEITTTANIDVERIVRDTVNGIGYHHSDLGFDGETCAVINMLGKQSPEIAQGVD---RADPEEQGAGDQGLMFGYASNETEVLMPAPIEYAHRLMERQSELRRAGELPWLRPDAKAQITLKY---DGSK-PVAIDAVVLSTQHDPSISQADLQEAIMESIIKQVLP 214          
The following BLAST results are available for this feature:
BLAST of CK937793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURCH3.938e-5251.61S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCC3.938e-5251.61S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCA3.938e-5251.61S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_XYLFT5.143e-5249.55S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_XYLFM5.143e-5249.55S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_XYLFA5.143e-5249.55S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_XYLF25.143e-5249.55S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_RHOSR5.143e-5252.68S-adenosylmethionine synthetase OS=Rhodococcus sp.... [more]
METK_RALEJ5.143e-5251.36S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_PSYA25.143e-5249.54S-adenosylmethionine synthetase OS=Psychrobacter a... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_H02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937793 ID=CK937793; Name=CK937793; organism=Citrus sinensis; type=EST; length=762bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACCTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCCGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGATGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCTGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCCCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAATGACGATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAA
CCTGTCATCCCC
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