CK937793

Overview
NameCK937793
Unique NameCK937793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 5.844e-72
Identity = 133/227 (58.59%), Postives = 167/227 (73.57%), Query Frame = 1
Query:   82 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A +DY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ VLA KL  R+ ++R++    WLRPD KTQVTV+Y  D+GA++PVRVHT++IS QH+E +T + +   LKE VIK V+P
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQVTVQYVQDNGAVIPVRVHTIVISVQHNEDITLEAMREALKEQVIKAVVP 233          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 7.632e-72
Identity = 133/227 (58.59%), Postives = 167/227 (73.57%), Query Frame = 1
Query:   82 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ VLA KL  R+ ++R++    WLRPD KTQVTV+Y  D+GA++PVR+HT++IS QH+E +T + +   LKE VIK V+P
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSVAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRIADLRRSGVLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEAMQEALKEQVIKAVVP 233          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 9.968e-72
Identity = 130/218 (59.63%), Postives = 166/218 (76.15%), Query Frame = 1
Query:  109 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            +FLFTSESV EGHPDK+ DQ+SDAVLDACL +DP SKVACET TKT M+MVFGEITTKA +DY+KI+R+  + IG+     G D   C VLV IEQQSPDIAQG+  H+ K  E++GAGDQG MFGYATDETPE +PL+ +LA +L A + + R++ +  WLRPD KTQVT+EY +D GA+VP +V TV++S QH E +T +E+  ++ E +IK  IP
Sbjct:   13 SFLFTSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPELLPLTLLLAHQLNANMAKARRDGSLPWLRPDTKTQVTIEYEHDGGAVVPKKVKTVVVSAQHSEDITTEELRKEILEKIIKTTIP 228          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.302e-71
Identity = 131/217 (60.37%), Postives = 166/217 (76.50%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ +LA KL AR+ ++R++    WLRPD KTQVTV+Y  D+GA++PVR+HT++IS QH+E +T +E+   LKE VI+ V+P
Sbjct:   18 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVP 232          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.221e-71
Identity = 129/218 (59.17%), Postives = 165/218 (75.69%), Query Frame = 1
Query:  109 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            TFLFTSESV EGHPDK+ DQ+SDA+LDACL +DP SKVACET TKT M+MVFGEITTKAK+DY+K+VR+  + IG+     G D   C +LV IE+QSPDIAQG+  H   R E++GAGDQG MFGYATDETPE  PL+ + A KL A ++  R++ +  WLRPD KTQVT+EY +D+GA+VP+RV TV++S QH   +T +E+  ++ E +IK  IP
Sbjct:   16 TFLFTSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGL--HLDDRLENLGAGDQGIMFGYATDETPELFPLTLLFAHKLNAAMSAARRDGSLPWLRPDTKTQVTIEYKHDNGAVVPLRVDTVVVSAQHAPEITTEELRKEILEKIIKTTIP 231          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.788e-71
Identity = 143/224 (63.84%), Postives = 167/224 (74.55%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND--DGAMV--PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            + + LF+SE V EGHPDKLCDQ+SDAVLDACL  DP SKVACE+C KT MVMVFGEITTKA +DY+KIVR+T + IGF S D GLD + C VLV IEQQSPDI QG+ G+F    ED+GAGDQG MFGYATDET   MPL++ LA  L  + +E+R++ +  W RPD KTQVTVEY  D  +G  V  P RV  VLIS QHDE VTND+I+ DL E VIK VIP
Sbjct:    3 VHSILFSSEHVTEGHPDKLCDQVSDAVLDACLAGDPFSKVACESCAKTGMVMVFGEITTKAVLDYQKIVRNTIKDIGFDSADKGLDYESCNVLVAIEQQSPDICQGL-GNFDS--EDLGAGDQGMMFGYATDETETLMPLTYELARGLAKKYSELRRSGSLEWARPDAKTQVTVEYDYDTREGKQVLTPKRVAVVLISAQHDEHVTNDKISVDLMEKVIKAVIP 223          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.102e-70
Identity = 131/227 (57.71%), Postives = 169/227 (74.45%), Query Frame = 1
Query:   82 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VR+T + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ +LA +L AR+ E+R++    WL+PD KTQVTV+Y  D+GA++P+RVHTV+IS QH+E +T +++   LKE VI+ V+P
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIMLAHRLNARMAELRRSGQLPWLQPDSKTQVTVQYTQDNGAVIPMRVHTVVISVQHNEDITLEDMRRALKEQVIRAVVP 233          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.898e-69
Identity = 130/217 (59.91%), Postives = 161/217 (74.19%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            FLFTSESV+EGHPDK+CDQISDAVLDA L+QDP +KVACET TKT MVM+ GEIT+KA VDY+ +VR     IGF    +G D   C VLV +EQQSP+IA GV  H  K  ED+GAGDQG MFGYATDET E MPL+ +L+ K+ A L ++R+N T  W+RPD K+QVT+EY +  GA +P+RVHTV++STQH   VT +++   +   VIK VIP
Sbjct:    5 FLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGV--HVNKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVSTQHSPDVTLEKLRETILADVIKKVIP 219          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.032e-68
Identity = 130/217 (59.91%), Postives = 163/217 (75.12%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W+RPD KTQVT+EY ++ GA VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIP 220          
BLAST of CK937793 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.032e-68
Identity = 130/217 (59.91%), Postives = 163/217 (75.12%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDDGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 762
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W+RPD KTQVT+EY ++ GA VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIP 220          
The following BLAST results are available for this feature:
BLAST of CK937793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_RAT5.844e-7258.59S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_MOUSE7.632e-7258.59S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_ASCIM9.968e-7259.63S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK1_HUMAN1.302e-7160.37S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_NEUCR2.221e-7159.17S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK_LEIIN3.788e-7163.84S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK1_BOVIN1.102e-7057.71S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_CAEEL7.898e-6959.91Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]
METK4_CAEEL1.032e-6859.91Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL1.032e-6859.91Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_H02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937793 ID=CK937793; Name=CK937793; organism=Citrus sinensis; type=EST; length=762bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACCTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCCGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGATGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCTGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCCCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAATGACGATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAA
CCTGTCATCCCC
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