CK937788

Overview
NameCK937788
Unique NameCK937788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.431e-45
Identity = 113/274 (41.24%), Postives = 151/274 (55.11%), Query Frame = 3
Query:   54 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLD--SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLSKDHKP--DLEVEKDRILKAGGFI------------------QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            S P   KF+ + +N+ ++Y +SSMQGW   MEDAHAA  +LD  +STSFFGVYDGHGG  VA +CAK  H ++  HE Y   DL+ +    FL MDE ++    WREL I  D          G ++  K G     F        P + + GP   GSTACV +IR  Q++V + GDSRCVLSR+ G A++LS DHKP    E E++R+  AGG                     +G   G + ++R+IGD  FK NK L  EKQ++  +PDI
Sbjct:    4 SLPVESKFTFEEENDRIKYVVSSMQGWGEKMEDAHAAILNLDDATSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYH-NDLINALDNVFLSMDENLQQSDAWRELVIPHD---------NGCMYFLKAGVCAKPF--------PQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGGRSLGLRCEQVMGNYVVKEQWVLGDFGGGVTISRSIGDFAFKKNKDLDREKQMLVCDPDI 259          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.189e-45
Identity = 102/260 (39.23%), Postives = 143/260 (55.00%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            MG YLS PK +K +  GQ ++V +  S MQGWR TMEDAH   PD+    S FGV+DGHGG+ VA+F  K+   ++LK++ +       + ++ FL+MDE++    G +EL                                    +   +D     +G TA VA+I    L VANAGDSR VL R     ++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L   +Q++ A PD+  +EL
Sbjct:    1 MGPYLSQPKKDKTTTTGQGKSVIFAASEMQGWRNTMEDAHIHKPDVIQDVSIFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEEALKETFLKMDELLVTPEGQKEL-----------------------------------NQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRTVLCRNNANYDMSVDHKPDNPEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDSKLRVNEQLIIAIPDVKKVEL 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C5_PARTE (Probable protein phosphatase 2C 5 OS=Paramecium tetraurelia GN=GSPATT00010582001 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.278e-45
Identity = 100/260 (38.46%), Postives = 151/260 (58.08%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            MG YLS PKTEK +  GQN+  +Y  + MQGWR TMEDAH +  +++     F V+DGHGG  VA F  ++  ++++K++ Y   +   +  + F ++D+M++   G        D+++K  G+                 +D TS            +G TA VA+I  K L VANAGDSR  L+R G+  ++SKDHKPD + EK RI +AGGF+  GR NG+L+L+RA+GD+E+K +     E+QI++A PD+   +L
Sbjct:    1 MGPYLSQPKTEKSTVTGQNQVFQYAATHMQGWRNTMEDAHISDMNIEPDVHLFAVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGQ-------DELNKIRGV-----------------NDETS-----------LAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDDQEKKRIERAGGFVSDGRANGNLSLSRALGDLEYKKDSRFKPEEQIISALPDVKVTQL 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C1_PARTE (Protein phosphatase 2C 1 OS=Paramecium tetraurelia GN=GSPATT00029903001 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 9.278e-45
Identity = 102/260 (39.23%), Postives = 143/260 (55.00%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            MG YLS PK +K +  GQ ++V +  S MQGWR TMEDAH   PD+    S FGV+DGHGG+ VA+F  K+   ++LK++ +       + ++ FL+MDE++    G +EL                                    +   +D     +G TA VA+I    L VANAGDSR VL R     ++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L + +Q++ A PD+   EL
Sbjct:    1 MGPYLSQPKRDKTTTTGQGKSVIFAASEMQGWRNTMEDAHIHRPDIIQDVSVFGVFDGHGGREVAQFVEKHFVDELLKNKNFKEQKFEEALKETFLKMDELLLTPEGQKEL-----------------------------------NQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRSVLCRNNTNHDMSVDHKPDNPEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDNKLRSNEQLIIALPDVKKTEL 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C4_PARTE (Probable protein phosphatase 2C 4 OS=Paramecium tetraurelia GN=GSPATT00020181001 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.604e-44
Identity = 100/260 (38.46%), Postives = 143/260 (55.00%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            MG YLS P   K +  G+ +++ +  S MQGWR TMEDAH    DL    S FGV+DGHGGK VA+F  K+  +++ K++ +       + ++ FL+MDE++    G +E+  +                  KGG+    +                 +G TA VA+     L VANAGDSR VL R     ++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L + +Q++ A PDI  +EL
Sbjct:    1 MGPYLSQPNKNKTTTSGEGKSIIFAASEMQGWRNTMEDAHIHVCDLQQDLSIFGVFDGHGGKEVAQFVEKHFIEELQKNKNFKDQKFEDALRETFLKMDELLLTPEGQKEIIQI------------------KGGDDEASY-----------------AGCTANVALFHKNVLYVANAGDSRSVLCRNNTNYDMSVDHKPDNYEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDSKLRSNEQLIIALPDIKKVEL 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.898e-43
Identity = 111/266 (41.73%), Postives = 149/266 (56.02%), Query Frame = 3
Query:   54 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLD--SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLSKDHKP--DLEVEKDRILKAGG---FIQVGRVNGSLNLAR-------AIGDVEFKLNKSLPAEKQIVTANPDI 803
            S P   KF+ + +N+ ++Y +SSMQGW   MEDAHAA  +LD  +STSFFGVYDGHGG  VA +CAK  H ++  HE Y   DL+ +    FL MDE ++    WREL I  D          G ++  K G     F        P + + GP   GSTACV +IR  Q++V + GDSRCVLSR+ G A++LS DHKP    E E++R+  AGG    ++  +V G+  +           GD  FK NK L  EKQ++  +PDI
Sbjct:   28 SLPVESKFTFEEENDRIKYVVSSMQGWGEKMEDAHAAILNLDDTTSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYH-NDLINALDNVFLSMDENLQQSDAWRELVIPHD---------NGCMYFLKAGVCAKPF--------PQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGGRSLGLRCEQVMGNYVVKEQWVLGDFGGGDFAFKKNKDLDREKQMLVCDPDI 275          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 8.684e-43
Identity = 103/257 (40.08%), Postives = 144/257 (56.03%), Query Frame = 3
Query:   39 MGVYLSTPKTEK-FSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            MG   S P  +   S +G+N  V+Y   + QG+R  MEDA A   DLD++TSFFGVYDGHGG  VA +CAK  H  +L+   Y   +L  +      R+D+ ++    WRE        +  + +               HF +         D+  P+  GSTACV IIR  Q++V N GDSRCVLS+ GQA++LS DHKP  E E++RI +AGG + + R+ G L  +RAIGD  +K N+++P  +Q+VT  PDI
Sbjct:    1 MGASPSRPLEQSPSSSEGENHRVKYASYTTQGFRPHMEDALAVELDLDATTSFFGVYDGHGGAEVAMYCAKRFHTMLLEDVDY-INNLPNAITSVCFRLDDDLQRSNEWRESLNPCANRNCLTNICANL----------HHFTE---------DYVPPSYEGSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVFLQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDI 237          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C2_SCHPO (Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe GN=ptc2 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.481e-42
Identity = 110/262 (41.98%), Postives = 139/262 (53.05%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAA---YPDLDSS---TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVV-ANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            MG  LS P  +K S  G +  + +G+S MQGWR +MEDAH A   + D +SS   TSFFGV+DGHGG  VAK+C ++L   +    ++  G+   + +  FL  D  +   R  +E                                                SG TA  A+I D Q++  ANAGDSR VL RKG A  LS DHKP+ +VEK RI  AGGFI  GRVNGSL L+RAIGD E+K + SLP EKQIVTA PD+
Sbjct:    1 MGQTLSEPVLDKHSSSGGDRWLHFGVSHMQGWRISMEDAHCALLNFTDSNSSNPPTSFFGVFDGHGGDRVAKYCRQHLPDIIKSQPSFWKGNYDEALKSGFLAADNALMQDRDMQE----------------------------------------------DPSGCTATTALIVDHQVIYCANAGDSRTVLGRKGTAEPLSFDHKPNNDVEKARITAAGGFIDFGRVNGSLALSRAIGDFEYKKDSSLPPEKQIVTAFPDV 216          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.300e-42
Identity = 109/277 (39.35%), Postives = 151/277 (54.51%), Query Frame = 3
Query:   54 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLD--SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLSKDHKP-DLEVEKDRILKAGGFIQ------------------VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            S P   K + + +N+ ++Y +SSMQG    MEDAHAA   LD  +STSFFGVYDGHGG  VA +CAK  H ++  HE Y   DL  +    F  MDE ++    WREL I  D          G+++  K G   + +    +  GP  +      GSTACV +IR  Q++V +AGDSRCVLSR+ G A++LS DHKP   E E++R+  AGG                     +G    S+ ++R+IGD  FK NK L  E+Q++  +PDI T ++
Sbjct:  112 SLPVESKVTVEEENDRIKYIVSSMQGLGHKMEDAHAAILSLDDTTSTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYH-NDLTNALDNVFFSMDENLQQSDAWRELVIPRD---------NGWMYFLKAGVCANFWPFPQAYTGPAYE------GSTACVVVIRGDQMIVGHAGDSRCVLSRQGGLAIDLSSDHKPRTSESERERVQNAGGISLGVDCEKVMENYVIKEQWILGYFGESVTISRSIGDFAFKQNKDLNREEQMLICDPDIHTHDI 372          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.533e-39
Identity = 102/263 (38.78%), Postives = 139/263 (52.85%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHA---AYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            MG  LS P T+K S    NEN   G S MQGWR  MEDAH    + PD D   +FF VYDGHGG  V+++    LH++V+  + +S G++  + +K FL +D+ MR                                      D+ T ++          SG+TA V +I++  +   NAGDSR V S  G+A  LS DHKP  E E  RI+ AGG+++  RVNG+L L+RA+GD  FK   + PAE+QIVTA PD+ T +L
Sbjct:    1 MGQTLSEPVTKKESASCANENYLVGSSCMQGWRVDMEDAHTHLLSLPD-DPKCAFFAVYDGHGGSKVSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQQMR-------------------------------------VDEETKDD---------VSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGGWVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKL 216          
The following BLAST results are available for this feature:
BLAST of CK937788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
P2C16_ORYSJ1.431e-4541.24Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
PP2C2_PARTE3.189e-4539.23Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
PP2C5_PARTE9.278e-4538.46Probable protein phosphatase 2C 5 OS=Paramecium te... [more]
PP2C1_PARTE9.278e-4539.23Protein phosphatase 2C 1 OS=Paramecium tetraurelia... [more]
PP2C4_PARTE4.604e-4438.46Probable protein phosphatase 2C 4 OS=Paramecium te... [more]
P2C17_ORYSJ3.898e-4341.73Probable protein phosphatase 2C 17 OS=Oryza sativa... [more]
P2C21_ORYSJ8.684e-4340.08Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PP2C2_SCHPO1.481e-4241.98Protein phosphatase 2C homolog 2 OS=Schizosaccharo... [more]
P2C18_ORYSJ3.300e-4239.35Probable protein phosphatase 2C 18 OS=Oryza sativa... [more]
PP2C2_CAEEL1.533e-3938.78Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937788 ID=CK937788; Name=CK937788; organism=Citrus sinensis; type=EST; length=839bp
GGGGAGATCTCATTATCTCTCTGCTCAAAGTAAAGAAAATGGGGGTATAT
CTGAGCACCCCCAAGACTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAA
TGTTCGATATGGATTGTCGTCGATGCAGGGGTGGCGTGCGACCATGGAAG
ATGCTCATGCAGCTTATCCAGATTTGGACAGTTCTACATCTTTCTTTGGT
GTTTATGATGGCCACGGTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTA
TCTTCACCAGCAGGTGCTCAAACATGAAGCTTATTCAGCTGGAGATTTAG
TCACTTCAGCACAGAAAGCTTTTCTCAGAATGGATGAGATGATGCGTGGA
CAAAGGGGATGGAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTT
TTCTGGCATGATTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCA
ATGATCATTTTGACGATTGGACATCGGAGGAGGGTCCTCACTCAGATTTT
CATGGACCAACTTCTGGAAGTACAGCTTGCGTAGCAATCATTAGAGACAA
GCAACTCGTGGTTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCGAGGA
AGGGCCAGGCACTTAATCTATCTAAAGACCATAAGCCTGATCTTGAGGTT
GAGAAAGATAGAATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGT
TAATGGAAGTTTAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGC
TAAACAAAAGTTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGAT
ATAAGTACTATTGAACTTTTGTGATGACGATGAGTTTCT
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