CK937788

Overview
NameCK937788
Unique NameCK937788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.607e-39
Identity = 100/256 (39.06%), Postives = 133/256 (51.95%), Query Frame = 3
Query:   54 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSS-TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            S P   KF+++ +N+ ++Y +SSMQGW   MEDAHAA  +LD + TSFFGVYDGHGG  VA +CAK  H ++  HE Y + +L  + + AF  MDE ++    WREL I  +          G+++  K            +E            GSTACV +IR  QL+V +AGDSRCVLSR GQA  LS DHKPD                               D   K N+ LP E Q++T NPDI T+++
Sbjct:  248 SLPVESKFTDEKENDRIKYVVSSMQGWGEKMEDAHAAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDS-NLSNAMRSAFYSMDEDLQLSDAWRELVIPRN---------NGWMYFLKAAACTSICKATYTEPA--------YEGSTACVVVIRGNQLIVGHAGDSRCVLSRNGQASALSVDHKPD------------------------------RDFACKKNERLPPEDQMLTCNPDILTMDI 455          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C22_ORYSJ (Putative protein phosphatase 2C 22 OS=Oryza sativa subsp. japonica GN=Os02g0607500 PE=3 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.072e-36
Identity = 109/294 (37.07%), Postives = 151/294 (51.36%), Query Frame = 3
Query:   39 MGVYLST--PKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDS--STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGR--------------------VNGSLNLARAI---------GDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            MG   ST  P T K + +G+N+ V+Y  S+MQG R +M+DA A   DLD+  STSFFGVYDGHGG  VA +CAK  H  + + E++   +L  +      R+D+ +     WR         +  S   + F +   G  AN     W S E     +  P+  GSTACV IIR  Q+ V N GDSRCVLS+ GQA++LS DHKP++ +E+ RIL+ GG  QV R                    + G L+ +RA+         GD  +K N     + Q+VT  PDI   ++
Sbjct:   78 MGASTSTKRPLTSKVTNEGENDRVKYASSAMQGLRMSMQDALAVELDLDALKSTSFFGVYDGHGGAEVAMYCAKRFHVMLREEESF-LNNLSYAITSVCSRLDDELEAPNVWRASLYPHRSSESSSESSDCFQFLSTGSCANV----WRSSEAV--SYKLPSYEGSTACVVIIRGNQITVGNVGDSRCVLSKNGQAIDLSTDHKPNVPLERQRILRVGG--QVWREKFPAKDSGGEIREQWGPYCIEGKLSTSRALAGIFLTTISGDFAYK-NIVYRPQYQMVTHFPDIRVAKI 361          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.290e-35
Identity = 95/273 (34.80%), Postives = 129/273 (47.25%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAA---YPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGD------------LVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTI 812
            MG +L  PKTEK +  G    +RYGLSSMQGWR  MEDAH A    P    + SFF VYDGH G  VA +C+ +L + +  +E + A D            + T  +  FL++DE MR                 FS +  G                               SGSTA   ++    +   N GDSR VL R GQ    ++DHKP   VEK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I
Sbjct:    1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLDNWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALEPSVESVKTGIRTGFLKIDEYMR----------------NFSDLRNGM----------------------------DRSGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI 229          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.103e-35
Identity = 95/273 (34.80%), Postives = 128/273 (46.89%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAA---YPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGD------------LVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTI 812
            MG +L  PKTEK +  G    +RYGLSSMQGWR  MEDAH A    P      SFF VYDGH G  VA +C+ +L + +  +E + A D            + T  +  FL++DE MR                 FS +  G                               SGSTA   +I    +   N GDSR VL R GQ    ++DHKP   +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I
Sbjct:    1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMR----------------NFSDLRNGM----------------------------DRSGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI 229          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.532e-34
Identity = 94/261 (36.02%), Postives = 128/261 (49.04%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAA---YPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTI 812
            MG +L  PKTEK +  G    +RYGLSSMQGWR  MEDAH A    P      SFF VYDGH G  VA +C+ +L + +  +E + A     SA +  L ++ +  G R       + + M  FS +  G                               SGSTA   +I  K +   N GDSR VL R GQ    ++DHKP    EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I
Sbjct:    1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALE--LSVENVKNGIR--TGFLKIDEYMRNFSDLRNGM----------------------------DRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI 229          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.532e-34
Identity = 96/273 (35.16%), Postives = 127/273 (46.52%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAA---YPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSA------------QKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTI 812
            MG +L  PKTEK +  G    +RYGLSSMQGWR  MEDAH A    P      SFF VYDGH G  VA +C+ +L + +  +E + A     SA            +  FL++DE MR                 FS +  G                               SGSTA   +I  K +   N GDSR VL R GQ    ++DHKP    EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I
Sbjct:    1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITNNEDFRAAGKSGSALEPSVENVKNGIRTGFLKIDEYMR----------------NFSDLRNGM----------------------------DRSGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI 229          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.307e-34
Identity = 95/270 (35.19%), Postives = 132/270 (48.89%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDS---STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAY--SAG-----DLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE 815
            MG +L  PK EK +  GQ   +RYGLSSMQGWR  MEDAH A   L S   S SFF VYDGH G  VAK+C ++L   +  ++ +  SAG     ++    +  FL +DE MR         ++ +K                                     HG   SGSTA   +I  +     N GDSR +L R  +    ++DHKP   +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE
Sbjct:    1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEKK------------------------------------HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIE 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 3.307e-34
Identity = 96/262 (36.64%), Postives = 132/262 (50.38%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDL-----DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRD--KQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            MG  LS P  +K    G +    +GL +MQGWR +MEDAH   P+L     +   +F+G++DGHGG +VA+FC   +   + K E++ +G L       FL  D           + +L D+  K                 +DH                  SG TA V ++    K L+ AN+GDSR VLS  G +  +S DHKP L  EK RI+ A GF+++ RVNG+L L+RAIGD EFK N  L   +Q+VT  PDI
Sbjct:    1 MGQILSNPIIDKEHHSGTDCLTAFGLCAMQGWRMSMEDAHIVEPNLLAESDEEHLAFYGIFDGHGGSSVAEFCGSKMISILKKQESFKSGMLEQCLIDTFLATD-----------VELLKDEKLK-----------------DDH------------------SGCTATVILVSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSNTKLGPHEQVVTCVPDI 216          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.320e-34
Identity = 94/270 (34.81%), Postives = 132/270 (48.89%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDS---STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAY--SAG-----DLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHG-PTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE 815
            MG +L  PK EK +  GQ   +RYGLSSMQGWR  MEDAH A   L S   + SFF VYDGH G  VAK+C ++L   +  ++ +  SAG     ++    +  FL +DE MR         ++ +K                                     HG   SGSTA   +I  +     N GDSR +L R  +    ++DHKP   +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE
Sbjct:    1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEKK------------------------------------HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIE 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.642e-34
Identity = 94/262 (35.88%), Postives = 133/262 (50.76%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSST-----SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQ--LVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            MG  LS P  +K S  G +    +GL +MQGWR +MED+H   P++ + +     +F+G++DGHGG  VA++C   + + + + +++  G+L  +    F+  D           + +L D + K                  DH                  SG TA   ++   Q  LV  NAGDSR VL+  G A  LS DHKP L  EK RI+ A GF+++ RVNG+L L+RAIGD EFK N  L  E+QIVT  PDI
Sbjct:    1 MGQILSNPVIDKESHSGADSLTAFGLCAMQGWRMSMEDSHILEPNVLTKSDKDHIAFYGIFDGHGGAKVAEYCGNKIVEILQEQKSFHEGNLPRALIDTFINTD-----------VKLLQDPVMK-----------------EDH------------------SGCTATSILVSKSQNLLVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSNPKLGPEEQIVTCVPDI 216          
The following BLAST results are available for this feature:
BLAST of CK937788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
P2C19_ORYSJ7.607e-3939.06Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]
P2C22_ORYSJ2.072e-3637.07Putative protein phosphatase 2C 22 OS=Oryza sativa... [more]
PPM1B_MOUSE2.290e-3534.80Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PPM1B_RAT5.103e-3534.80Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PPM1B_HUMAN2.532e-3436.02Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
PPM1B_BOVIN2.532e-3435.16Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
PPM1A_HUMAN3.307e-3435.19Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
PP2C3_YEAST3.307e-3436.64Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
PPM1A_BOVIN4.320e-3434.81Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
PP2C2_YEAST5.642e-3435.88Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937788 ID=CK937788; Name=CK937788; organism=Citrus sinensis; type=EST; length=839bp
GGGGAGATCTCATTATCTCTCTGCTCAAAGTAAAGAAAATGGGGGTATAT
CTGAGCACCCCCAAGACTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAA
TGTTCGATATGGATTGTCGTCGATGCAGGGGTGGCGTGCGACCATGGAAG
ATGCTCATGCAGCTTATCCAGATTTGGACAGTTCTACATCTTTCTTTGGT
GTTTATGATGGCCACGGTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTA
TCTTCACCAGCAGGTGCTCAAACATGAAGCTTATTCAGCTGGAGATTTAG
TCACTTCAGCACAGAAAGCTTTTCTCAGAATGGATGAGATGATGCGTGGA
CAAAGGGGATGGAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTT
TTCTGGCATGATTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCA
ATGATCATTTTGACGATTGGACATCGGAGGAGGGTCCTCACTCAGATTTT
CATGGACCAACTTCTGGAAGTACAGCTTGCGTAGCAATCATTAGAGACAA
GCAACTCGTGGTTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCGAGGA
AGGGCCAGGCACTTAATCTATCTAAAGACCATAAGCCTGATCTTGAGGTT
GAGAAAGATAGAATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGT
TAATGGAAGTTTAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGC
TAAACAAAAGTTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGAT
ATAAGTACTATTGAACTTTTGTGATGACGATGAGTTTCT
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