CK937788

Overview
NameCK937788
Unique NameCK937788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.368e-34
Identity = 94/270 (34.81%), Postives = 132/270 (48.89%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDS---STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAY--SAG-----DLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHG-PTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE 815
            MG +L  PK EK +  GQ   +RYGLSSMQGWR  MEDAH A   L S   + SFF VYDGH G  VAK+C ++L   +  ++ +  SAG     ++    +  FL +DE MR         ++ +K                                     HG   SGSTA   +I  +     N GDSR +L R  +    ++DHKP   +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE
Sbjct:    1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEKK------------------------------------HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIE 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.368e-34
Identity = 94/270 (34.81%), Postives = 132/270 (48.89%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDS---STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAY--SAG-----DLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHG-PTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE 815
            MG +L  PK EK +  GQ   +RYGLSSMQGWR  MEDAH A   L S   + SFF VYDGH G  VAK+C ++L   +  ++ +  SAG     ++    +  FL +DE MR         ++ +K                                     HG   SGSTA   +I  +     N GDSR +L R  +    ++DHKP   +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE
Sbjct:    1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEKK------------------------------------HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIE 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.368e-34
Identity = 94/270 (34.81%), Postives = 131/270 (48.52%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSST---SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAY--SAG-----DLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE 815
            MG +L  PK EK +  GQ   +RYGLSSMQGWR  MEDAH A   L S     SFF VYDGH G  VAK+C ++L   +  ++ +  SAG     ++    +  FL +DE MR         ++ +K                                     HG   SGSTA   +I  +     N GDSR +L R  +    ++DHKP   +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE
Sbjct:    1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFRGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEKK------------------------------------HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIE 225          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.296e-27
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 3
Query:  504 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            G  SG+TA VA+IR KQL+VANAGDSRCV+S  G+AL++S DHKP+ EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L
Sbjct:  325 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTL 430          

HSP 2 Score: 107.071 bits (266), Expect = 1.304e-22
Identity = 55/115 (47.83%), Postives = 70/115 (60.87%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNEN---VRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELA 374
            MG YLS P T K S DG       + YG S+MQGWR +MEDAH   P+LDS T+ F VYDGHGG+ VA +CAKYL   +   +AY  G L  + + AFL +D  +  +   +ELA
Sbjct:    1 MGAYLSQPNTVKCSGDGVGAPRLPLSYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYDGHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELA 115          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.296e-27
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 3
Query:  504 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            G  SG+TA VA+IR KQL+VANAGDSRCV+S  G+AL++S DHKP+ EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L
Sbjct:  324 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTL 429          

HSP 2 Score: 106.686 bits (265), Expect = 1.703e-22
Identity = 55/115 (47.83%), Postives = 70/115 (60.87%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNEN---VRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELA 374
            MG YLS P T K S DG       + YG S+MQGWR +MEDAH   P+LDS T+ F VYDGHGG+ VA +CAKYL   +   +AY  G L  + + AFL +D  +  +   +ELA
Sbjct:    1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYDGHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELA 115          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.296e-27
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 3
Query:  504 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            G  SG+TA VA+IR KQL+VANAGDSRCV+S  G+AL++S DHKP+ EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L
Sbjct:  322 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTL 427          

HSP 2 Score: 107.842 bits (268), Expect = 7.643e-23
Identity = 55/115 (47.83%), Postives = 71/115 (61.74%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNEN---VRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELA 374
            MG YLS P T K S DG   +   + YG S+MQGWR +MEDAH   P+LDS T+ F VYDGHGG+ VA +CAKYL   +   +AY  G L  + + AFL +D  +  +   +ELA
Sbjct:    1 MGAYLSQPNTVKCSGDGVGASRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYDGHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELA 115          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 5.114e-27
Identity = 63/106 (59.43%), Postives = 82/106 (77.36%), Query Frame = 3
Query:  504 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            G  SG+TA VA+IR KQL+VANAGDSRCV+S  G+AL++S DHKP+ EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP ++Q+++A PDI  + L
Sbjct:  321 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTL 426          

HSP 2 Score: 106.686 bits (265), Expect = 1.703e-22
Identity = 55/115 (47.83%), Postives = 70/115 (60.87%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNEN---VRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELA 374
            MG YLS P T K S DG       + YG S+MQGWR +MEDAH   P+LD+ T+ F VYDGHGG+ VA +CAKYL   +   +AY  G L  + Q AFL +D  +  +   +ELA
Sbjct:    1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDNETAMFSVYDGHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALQDAFLAIDAKLTTEEVIKELA 115          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.149e-25
Identity = 63/123 (51.22%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  447 ANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTI 812
            AND+F     EE       G  SG TA V +++ + L VANAGDSRCV+SR GQA+ +S DHKP+ + E  RI+KAGG + + GRVNG LNL+RA+GD  +K N +LPAE+Q+++A PDI  +
Sbjct:  376 ANDNFCANMIEEP------GKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTLDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKL 492          

HSP 2 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 49/102 (48.04%), Postives = 64/102 (62.75%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMM 344
            MG YLS PKT+K S D  NE +  G SSMQGWR + EDAH +  + D++TSFF VYDGHGG  VA++CA  L   +   E Y  G    + ++AFL  D+ +
Sbjct:    1 MGAYLSHPKTDKTSTDQFNELLAVGASSMQGWRNSQEDAHNSILNFDNNTSFFAVYDGHGGAEVAQYCADKLPHFLKNLETYKNGQFEVALKEAFLGFDKTL 102          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.806e-25
Identity = 80/243 (32.92%), Postives = 115/243 (47.33%), Query Frame = 3
Query:  102 VRYGLSSMQGWRATMEDAHAA---YPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKH--EAYSAGDLVTSA-QKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTI 812
            +R+G S++QGWRA MEDAH A    P L S  +FF V DGHGG   A+F A++L   VL     A    D V  A + AFL+ D  +                          +W                         G   GSTA   ++  + L +A+ GDSR +LSR G     ++DH+P    E++RI  AGG ++  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +
Sbjct:   58 LRFGASAVQGWRARMEDAHCARLALPGLPSGWAFFAVLDGHGGARAARFGARHLPGYVLGELGPAPQEPDGVRQALRSAFLQADAQLSA------------------------LWP-----------------------RGDPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGTVRRRRVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAAL 253          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.165e-25
Identity = 79/243 (32.51%), Postives = 114/243 (46.91%), Query Frame = 3
Query:  102 VRYGLSSMQGWRATMEDAHAAY---PDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKH---EAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTI 812
            +R+G S+ QGWRA MEDAH  +   P L    + F V DGHGG   A+F A++L   VL+    E      +  + ++AFL  DE +R                                        W   E         T G TA V ++  + L +A+ GDSR VLSR G     ++DH+P    E++RI  AGG I+  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +
Sbjct:   65 LRFGASAAQGWRARMEDAHCTWLSLPGLPPGWALFAVLDGHGGARAARFGARHLPGHVLQELGPEPSEPEGVREALRRAFLSADERLRSL--------------------------------------WPRVE---------TGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAAL 260          
The following BLAST results are available for this feature:
BLAST of CK937788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PPM1A_RAT7.368e-3434.81Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1A_RABIT7.368e-3434.81Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_MOUSE7.368e-3434.81Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]
PPM1G_MACFA2.296e-2760.38Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN2.296e-2760.38Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_BOVIN2.296e-2760.38Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
PPM1G_MOUSE5.114e-2759.43Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
Y0417_DROME2.149e-2551.22Probable protein phosphatase CG10417 OS=Drosophila... [more]
PPMBL_MOUSE2.806e-2532.92Probable protein phosphatase 1B-like OS=Mus muscul... [more]
PPMBL_HUMAN8.165e-2532.51Probable protein phosphatase 1B-like OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937788 ID=CK937788; Name=CK937788; organism=Citrus sinensis; type=EST; length=839bp
GGGGAGATCTCATTATCTCTCTGCTCAAAGTAAAGAAAATGGGGGTATAT
CTGAGCACCCCCAAGACTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAA
TGTTCGATATGGATTGTCGTCGATGCAGGGGTGGCGTGCGACCATGGAAG
ATGCTCATGCAGCTTATCCAGATTTGGACAGTTCTACATCTTTCTTTGGT
GTTTATGATGGCCACGGTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTA
TCTTCACCAGCAGGTGCTCAAACATGAAGCTTATTCAGCTGGAGATTTAG
TCACTTCAGCACAGAAAGCTTTTCTCAGAATGGATGAGATGATGCGTGGA
CAAAGGGGATGGAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTT
TTCTGGCATGATTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCA
ATGATCATTTTGACGATTGGACATCGGAGGAGGGTCCTCACTCAGATTTT
CATGGACCAACTTCTGGAAGTACAGCTTGCGTAGCAATCATTAGAGACAA
GCAACTCGTGGTTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCGAGGA
AGGGCCAGGCACTTAATCTATCTAAAGACCATAAGCCTGATCTTGAGGTT
GAGAAAGATAGAATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGT
TAATGGAAGTTTAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGC
TAAACAAAAGTTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGAT
ATAAGTACTATTGAACTTTTGTGATGACGATGAGTTTCT
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