CK937788

Overview
NameCK937788
Unique NameCK937788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PP2C1_CAEEL (Probable protein phosphatase 2C F42G9.1 OS=Caenorhabditis elegans GN=F42G9.1 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.293e-24
Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = 3
Query:  504 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            G  SG+TACV ++   +++VANAGDSR VL R G+A++LS DHKP+ EVE +RI  AGG I+ GRVNG LNL+RA GD  +K N+ L  ++Q++TA PD+
Sbjct:  312 GEDSGTTACVCLVGKDKVIVANAGDSRAVLCRNGKAVDLSVDHKPEDEVETNRIHAAGGQIEDGRVNGGLNLSRAFGDHAYKKNQELGLKEQMITALPDV 411          

HSP 2 Score: 96.6709 bits (239), Expect = 1.762e-19
Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 3
Query:   39 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDK 389
            MG YL+ P  EK  E+G    + Y  ++MQGWR   EDAH    DL +    FGVYDGHGG  V+KF +  L   + + + + A D+    QKAF+  D+ +R +   +EL  +GD+
Sbjct:    1 MGAYLNKPIIEKEKEEGSGNGLSYACTTMQGWRVNQEDAHNCVVDLHTDWHMFGVYDGHGGTEVSKFTSAKLPDFLKERKFWEADDVAECLQKAFVDFDDFIRAEESMKELKDIGDE 117          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.912e-24
Identity = 94/266 (35.34%), Postives = 122/266 (45.86%), Query Frame = 3
Query:   48 YLSTPKTEKFSEDGQNENV---RYGLSSMQGWRATMEDAHAAYPDLDSSTS------FFGVYDGHGGKAVAKFCAKYLH---QQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPD 800
            Y S P++ +     QN +V   RYG+SS+ G R  MEDA A +P   S  +      +FGVYDGHG   VA  C + LH   Q+ L  +     +  T+ +++F RMD+                         E   W      AN   D  T    P  D    + GSTA V++I   ++VVAN GDSR VL R G+ + LS DHKPD   E DRI  AGG   +    RV G L ++RAIGD   K   S   E  I     D
Sbjct:   55 YSSIPRSSREDFSDQNVDVSSPRYGVSSVCGRRREMEDAVAIHPSFSSPKNSEFPQHYFGVYDGHGCSHVAARCRERLHKLVQEELSSDMEDEEEWKTTMERSFTRMDK-------------------------EVVSWGDSVVTANCKCDLQT----PACD----SVGSTAVVSVITPDKIVVANCGDSRAVLCRNGKPVPLSTDHKPDRPDELDRIEGAGGRVIYWDCPRVLGVLAMSRAIGDNYLKPYVSCEPEVTITDRRDD 287          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.643e-23
Identity = 91/249 (36.55%), Postives = 119/249 (47.79%), Query Frame = 3
Query:  105 RYGLSSMQGWRATMEDAHAAYPD-LDSSTS-----FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILG-DKMDKFSGMIEGFIW--SPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE 815
            RYG++S+ G R  MEDA +  PD L  STS     FFGV+DGHG   VA+ C   +H+            LV  A K  +   E       W+++   G  +MD      E  IW  S  GGE     +  T     H        GSTA VA++   ++VVAN+GDSR VL R G  + LS DHKPD   E +RI  AGG   +    RV G L ++RAIGD            K  VT+ P+++  E
Sbjct:   91 RYGVTSVFGRRREMEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHE------------LVVDAYKKAVSGKEAAAAAPAWKDVMEKGFARMDD-----EATIWAKSRTGGEPACRCELQTPARCDHV-------GSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYL---------KPYVTSEPEVTVTE 306          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.793e-22
Identity = 85/226 (37.61%), Postives = 109/226 (48.23%), Query Frame = 3
Query:   81 EDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFK 749
            ED + E  RYG +S+ G R  MED+ +A P       FFGV+DGHG   VA  C + +H+ V+     +AG            +DE  R    WR     G     F+ M    + S +G  A         +  P  D      GSTA VA++  + +VVAN GDSR VL R G A+ LS DHKPD   E +RI  AGG   F    RV G L ++RAIGD   K
Sbjct:   69 EDREVERARYGFTSVCGRRRDMEDSVSACPGFLPGHHFFGVFDGHGCSHVATSCGQRMHEIVVDEAGAAAGSA---------GLDEEAR----WR-----GVMERSFARMDAEAVASSRGSVAPAPTCRCEMQL-PKCDH----VGSTAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHKPDRPDELERIHAAGGRVIFWDGARVFGMLAMSRAIGDSYLK 271          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.450e-22
Identity = 81/244 (33.20%), Postives = 120/244 (49.18%), Query Frame = 3
Query:  105 RYGLSSMQGWRATMEDAHAAYPDLDSSTS---FFGVYDGHGGKAVAKFCAKYLHQQVLK-HEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE 815
            RYG++++ G R  MEDA +  PD   ++    F+GV+DGHG   VA  C   +H+ V + H   ++G++                    WR      D M+K    ++G + +     ++D       ++ P    H   +GSTA VA++   Q+VVANAGDSR V+SR G  + LS DHKPD   E +RI  AGG   +    RV G L ++RAIGD            K  VT+ P+++  E
Sbjct:   99 RYGVTAVCGRRREMEDAVSIRPDFLPASGKFHFYGVFDGHGCSHVATTCQDRMHEIVAEEHNKGASGEVAP------------------WR------DVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDH---AGSTAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDGYL---------KPYVTSEPEVTVTE 306          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.104e-21
Identity = 86/263 (32.70%), Postives = 121/263 (46.01%), Query Frame = 3
Query:   48 YLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDA-HAAYPDLDSS-TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELL 821
            +L+  +T KFS         YG SS++G RATMED       D++    +FFGV+DGHGG   A++    L + ++ H+     D ++  +KA + +                      F    E ++    G   N                    +GSTA  A +   +L+VAN GDSR V SR G A+ LS DHKPD   E+ RI  AGGFI      RV G L ++RA GD + K    + AE +I     DIST+E +
Sbjct:  113 FLAGVRTVKFS---------YGYSSLKGKRATMEDYFETRISDVNGQMVAFFGVFDGHGGARTAEYLKNNLFKNLVSHD-----DFISDTKKAIVEV----------------------FKQTDEEYLIEEAGQPKN--------------------AGSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLK--PYVIAEPEI--QEEDISTLEFI 315          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.220e-20
Identity = 91/296 (30.74%), Postives = 130/296 (43.92%), Query Frame = 3
Query:    3 GDLIISLLKVKKMGVYLSTP--------KTEKFSEDG---QNENVRYG-----LSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAG--DLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ----VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            GD  +S LK +K   +L+ P        +T+ FS      QN  V +G     + S  G +  MED H   P L  +S  SFFGVYDGHGG   A+F A+ LH+ V++      G  + V + + AFLR D                D ++K                                   G  SG+    A+I+D++++V+N GD R VL R G A  L+ DHKP  + EK+RI   GG++       RV G L ++R+IGD            K+ V A P+   +EL
Sbjct:   71 GDAKVSPLK-RKRPAHLNIPDLNPQQPIRTDYFSFTDFAHQNGTVSFGGNGFGVVSRNGKKKFMEDTHRIVPCLVGNSKKSFFGVYDGHGGAKAAEFVAENLHKYVVEMMENCKGKEEKVEAFKAAFLRTDR---------------DFLEK-----------------------------------GVVSGACCVTAVIQDQEMIVSNLGDCRAVLCRAGVAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHL---------KKWVVAEPETRVLEL 306          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.594e-20
Identity = 85/250 (34.00%), Postives = 117/250 (46.80%), Query Frame = 3
Query:  105 RYGLSSMQGWRATMEDAHAAYPDLDSSTS--------FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYS--AGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE 815
            RYG++S+ G R  MEDA A +P      +        +FGVYDGHG   VA  C + LH+ V + EA S    +     +++F RMD+                         E   W      AN   +  T    P  D      GSTA V++I  ++++VAN GDSR VL R G+A+ LS DHKPD   E DRI +AGG   +    RV G L ++RAIGD            K  VT+ P+++  +
Sbjct:  120 RYGVASVCGRRRDMEDAVALHPSFVRKQTEFSRTRWHYFGVYDGHGCSHVAARCKERLHELV-QEEALSDKKEEWKKMMERSFTRMDK-------------------------EVVRWGETVMSANCRCELQT----PDCD----AVGSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGDNYL---------KPYVTSEPEVTVTD 326          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.081e-20
Identity = 70/223 (31.39%), Postives = 106/223 (47.53%), Query Frame = 3
Query:  105 RYGLSSMQGWRATMEDAHAAYPDL-----DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNK 758
            R G  S +G + +MED      DL      S+ +F+GV+DGHGG   A F  K + + V++ + +       + + AF++ D  +               +D+                                     +SG+TA  A+I DK +++ANAGDSR VL ++G+A+ LSKDHKP+   E+ RI K GG I  G +NG L++ARA+GD   K  K
Sbjct:   72 RSGSWSDKGPKQSMEDEFICVDDLTEYIGSSTGAFYGVFDGHGGVDAASFTKKNIMKLVMEDKHFPTSTK-KATRSAFVKTDHALAD----------ASSLDR-------------------------------------SSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTK 246          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.550e-20
Identity = 80/261 (30.65%), Postives = 116/261 (44.44%), Query Frame = 3
Query:   48 YLSTPKTEKFSEDG----QNENVRYGLSSMQGWRATMEDAHAAYPDLDSS--TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            Y + P+T +    G    QN    YG +S  G R++MED      D  +      FGV+DGHGG   A++  ++L   ++ H  +     ++  + A                                         +A +H D   SE     + H   +GSTA  AI+   +LVVAN GDSR V+SR G+A+ +S+DHKPD   E++RI  AGGF+      RV G L ++RA GD            KQ V A+P+I
Sbjct:   10 YSNQPQTVEAPASGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSNLITHPKF-----ISDTKSAIT---------------------------------------DAYNHTD---SELLKSENSHNRDAGSTASTAILVGDRLVVANVGDSRAVISRGGKAIAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGD---------RLLKQYVVADPEI 214          
The following BLAST results are available for this feature:
BLAST of CK937788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PP2C1_CAEEL5.293e-2455.00Probable protein phosphatase 2C F42G9.1 OS=Caenorh... [more]
P2C24_ARATH6.912e-2435.34Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]
P2C49_ORYSJ7.643e-2336.55Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C30_ORYSJ3.793e-2237.61Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
P2C09_ORYSJ8.450e-2233.20Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C11_ARATH1.104e-2132.70Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C14_ARATH1.220e-2030.74Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C03_ARATH1.594e-2034.00Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C47_ARATH2.081e-2031.39Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
P2C69_ARATH3.550e-2030.65Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937788 ID=CK937788; Name=CK937788; organism=Citrus sinensis; type=EST; length=839bp
GGGGAGATCTCATTATCTCTCTGCTCAAAGTAAAGAAAATGGGGGTATAT
CTGAGCACCCCCAAGACTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAA
TGTTCGATATGGATTGTCGTCGATGCAGGGGTGGCGTGCGACCATGGAAG
ATGCTCATGCAGCTTATCCAGATTTGGACAGTTCTACATCTTTCTTTGGT
GTTTATGATGGCCACGGTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTA
TCTTCACCAGCAGGTGCTCAAACATGAAGCTTATTCAGCTGGAGATTTAG
TCACTTCAGCACAGAAAGCTTTTCTCAGAATGGATGAGATGATGCGTGGA
CAAAGGGGATGGAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTT
TTCTGGCATGATTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCA
ATGATCATTTTGACGATTGGACATCGGAGGAGGGTCCTCACTCAGATTTT
CATGGACCAACTTCTGGAAGTACAGCTTGCGTAGCAATCATTAGAGACAA
GCAACTCGTGGTTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCGAGGA
AGGGCCAGGCACTTAATCTATCTAAAGACCATAAGCCTGATCTTGAGGTT
GAGAAAGATAGAATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGT
TAATGGAAGTTTAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGC
TAAACAAAAGTTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGAT
ATAAGTACTATTGAACTTTTGTGATGACGATGAGTTTCT
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