CK937788

Overview
NameCK937788
Unique NameCK937788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18
Identity = 79/246 (32.11%), Postives = 111/246 (45.12%), Query Frame = 3
Query:  105 RYGLSSMQGWRATMEDAHAAYPDLDSSTS---------FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDIS 806
            R+G +S+ G R  MEDA +      +  +         F+GV+DGHG   VA  C + +H+ V   E   AG    +A++     + M R         I G + +  S   EG        +  DH                   GSTA VA++ + ++VVAN GDSR VL R G  + LS DHKPD   E +RI  AGG   F +  RV G L ++R+IGD            K  VTA P+++
Sbjct:   74 RHGAASVAGRRREMEDAVSLREAFAAPANGEVAAARCDFYGVFDGHGCSHVADACRERMHELVA--EEMGAGSPAAAAREPASWTETMERSFARMDAEVIAGCRAESGSCRCEG--------QKCDHV------------------GSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGARVLGVLAMSRSIGDAYL---------KPYVTAVPEVT 282          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18
Identity = 70/237 (29.54%), Postives = 105/237 (44.30%), Query Frame = 3
Query:   99 NVRYGLSSMQGWRATMEDAHAAYPDLD----------SSTSFFGVYDGHGGKAVAKFCAKYLHQ---------QVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKL 752
            N+R G  +  G R  MED H    DL           +  +F+GV+DGHGG   A +  ++  +         Q L+ +      +  S   AFL  D  +       +LAI                                            +SG+TA  A+I  +QL+VANAGD R VL RKG A+ +S+DH+P  + E +RI + GG+I+ G +NG L++ RA+GD + K+
Sbjct:   67 NIRSGSFADIGPRRYMEDEHIRIDDLSGHLGSLLMCPAPNAFYGVFDGHGGPDAAAYMKRHAIRLFFEDSEFPQALEEDESFYESVEKSIHNAFLSADLALAD-----DLAI------------------------------------------SRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYIEDGYLNGVLSVTRALGDWDMKM 256          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18
Identity = 75/242 (30.99%), Postives = 105/242 (43.39%), Query Frame = 3
Query:   93 NENVRYGLSSMQGWRATMEDAHAAYPD-LDSST-SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            N    YG +S  G R++MED +    D +D  T   FGV+DGHGG   A+F  + L   ++KH    +      A+       E+++ +                                                 H   +GSTA  AI+   +L+VAN GDSR V+ R G A+ +S+DHKPD   E+ RI  AGGF+      RV G L ++RA GD      K L   KQ V A+P+I
Sbjct:   60 NGKFSYGYASSPGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDSELLKAETS-----------------------------------------------HNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------KLL---KQYVVADPEI 245          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 77/243 (31.69%), Postives = 105/243 (43.21%), Query Frame = 3
Query:   90 QNENVRYGLSSMQGWRATMEDAHAAYPD-LDSST-SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            QN    YG +S  G RA+MED +    D +D      FGV+DGHGG  VA++  + L   +L+H  + +   V         +D+  +                                         T  E   SD      GSTA  A++   +L VAN GDSR ++ R G A+ +SKDHKPD   E+ RI  AGGF+      RV G L ++RA GD      K L   KQ V  +P+I
Sbjct:   22 QNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVA--------IDDAYKS----------------------------------------TDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------KLL---KQYVVVDPEI 207          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 76/219 (34.70%), Postives = 107/219 (48.86%), Query Frame = 3
Query:  105 RYGLSSMQGWRATMEDAHAAYPDLDSSTS----FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQ-KAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGD 737
            + G +S+ G R  MEDA + +P      S    F+GV+DGHG   VA+ C + LH  V K     A D  T    K+F +MD+ +      RE  ++          + G   S K     +        + P  D      GSTA V+++  ++++V+N GDSR VL R G A+ LS DHKPD   E  RI +AGG   +    RV G L ++RAIGD
Sbjct:  104 KIGTTSVCGRRRDMEDAVSIHPSFLQRNSENHHFYGVFDGHGCSHVAEKCRERLHDIVKKEVEVMASDEWTETMVKSFQKMDKEV----SQRECNLV----------VNGATRSMKNSCRCEL-------QSPQCD----AVGSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRVIYWDGARVLGVLAMSRAIGD 297          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 74/249 (29.72%), Postives = 110/249 (44.18%), Query Frame = 3
Query:  102 VRYGLSSMQGWRATMEDAHAAYPDL----------DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            +R G  S  G R  MEDAH    DL          D   SF+GV+DGHGGK  A +    L  +V+  +A    +L    +++F++ D                                              +E   H +    +SG+TA  A+I  + L+VANAGD R VLSR+G A+ +SKDH+     E+ RI   GG++  G +NG L + RA+GD   +  K +      ++A P++  I L
Sbjct:   53 IRSGDWSDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGGKDAAHYVRDNL-PRVIVEDADFPLELEKVVRRSFVQTDSQF-------------------------------------------AERCSHQN--ALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYVDDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITL 255          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 77/233 (33.05%), Postives = 104/233 (44.64%), Query Frame = 3
Query:  108 YGLSSMQGWRATMEDAHAAYPDL--------------------DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGD 737
            +G  S+QG R+ MEDA A  P                        +  FFGVYDGHGG  VA +C   LH        ++  + +   +    + +     Q  W +  +         G IEG I     G ++   +   SE          T GSTA VA++    +VV+N GDSR VL R  +A+ LS DHKPD E E  RI  AGG +   Q  RV G L ++R+IGD
Sbjct:  190 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLH--------FALAEEIERIKDELCKRNTGEGRQVQWDK--VFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASE----------TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGD 402          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.323e-18
Identity = 75/233 (32.19%), Postives = 100/233 (42.92%), Query Frame = 3
Query:  108 YGLSSMQGWRATMEDAHAAYPDL-------DSSTSFFGVYDGHGGKAVAKFCAKYLH--------QQVLKHEAYSAGDLVTSA-----QKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV---GRVNGSLNLARAIGD 737
            YG+ S+ G    MED+    P+L            FF VYDGHGG  V+  C+  +H        Q + + E  S  D+V        +++F RMDEM           + G  +   +         P+                         SGSTA  A++    ++VAN GDSR VL R G A+ LS DHKPD   E+ RI  AGG + V    RV G L  +RAIGD
Sbjct:  109 YGIVSVMGRSRKMEDSVTVKPNLCKPEVNRQRPVHFFAVYDGHGGSQVSTLCSTTMHTFVKEELEQNLEEEEEGSENDVVERKWRGVMKRSFKRMDEMATST------CVCGTSVPLCN-------CDPR---------------------EAAISGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGD 307          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.323e-18
Identity = 87/296 (29.39%), Postives = 130/296 (43.92%), Query Frame = 3
Query:   12 IISLLKVKKMGVYLSTPKTEKFSEDGQNE-------NVRYGL----SSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVL------SRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            I  ++K +  G    T + EK   +   E       +V +GL    +  +G R  M+DAH    D+              S+F V+DGHGG   +KF A+ LHQ +++   +  GD++ S +K   R                    +D F    E F+      +A+     W               GSTA   +  D  L +AN GDSR +L      S+K  AL+LSK+H P    E+ RI KAGG ++ GRV G L ++R+IGD ++K        +  VT+ PDI   +L
Sbjct:   66 ISQMVKTEGKGAKRKTSEEEKNGSEELVEKKVCKASSVIFGLKGYVAERKGEREEMQDAHVILNDITEECRPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRK--FPKGDVI-SVEKTVKRC------------------LLDTFKHTDEEFL-----KQASSQKPAWKD-------------GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYK--------RCGVTSVPDIRRCQL 314          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.340e-18
Identity = 76/255 (29.80%), Postives = 116/255 (45.49%), Query Frame = 3
Query:   72 KFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSST--SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLSKDHKPDLEVEKDRILKAGGFIQVG---RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            +FS+  + +N    + S+QG R  MED      DL + T  S FG++DGHGG+  A++    L + + +H      D     + + L    ++  Q     L+I  + ++K +   +                                +G+T  +A++ DK L VAN GDSR VL  K G A+ LS DHKP    E+ RI +AGGFI      RV G L ++R++GD   K          +V  +PDI T +L
Sbjct:   81 EFSKTWEFKNHNVAVYSIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQH----LQDYEKDKENSVLSYQTILEQQI----LSIDREMLEKLTVSYD-------------------------------EAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDL 289          
The following BLAST results are available for this feature:
BLAST of CK937788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
P2C68_ORYSJ1.492e-1832.11Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C02_ORYSJ1.492e-1829.54Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
P2C59_ORYSJ1.948e-1830.99Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C45_ORYSJ2.544e-1831.69Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C37_ARATH2.544e-1834.70Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C27_ORYSJ2.544e-1829.72Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C16_ARATH2.544e-1833.05Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C75_ARATH3.323e-1832.19Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
ILKAP_HUMAN3.323e-1829.39Integrin-linked kinase-associated serine/threonine... [more]
PPM1L_HUMAN4.340e-1829.80Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937788 ID=CK937788; Name=CK937788; organism=Citrus sinensis; type=EST; length=839bp
GGGGAGATCTCATTATCTCTCTGCTCAAAGTAAAGAAAATGGGGGTATAT
CTGAGCACCCCCAAGACTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAA
TGTTCGATATGGATTGTCGTCGATGCAGGGGTGGCGTGCGACCATGGAAG
ATGCTCATGCAGCTTATCCAGATTTGGACAGTTCTACATCTTTCTTTGGT
GTTTATGATGGCCACGGTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTA
TCTTCACCAGCAGGTGCTCAAACATGAAGCTTATTCAGCTGGAGATTTAG
TCACTTCAGCACAGAAAGCTTTTCTCAGAATGGATGAGATGATGCGTGGA
CAAAGGGGATGGAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTT
TTCTGGCATGATTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCA
ATGATCATTTTGACGATTGGACATCGGAGGAGGGTCCTCACTCAGATTTT
CATGGACCAACTTCTGGAAGTACAGCTTGCGTAGCAATCATTAGAGACAA
GCAACTCGTGGTTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCGAGGA
AGGGCCAGGCACTTAATCTATCTAAAGACCATAAGCCTGATCTTGAGGTT
GAGAAAGATAGAATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGT
TAATGGAAGTTTAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGC
TAAACAAAAGTTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGAT
ATAAGTACTATTGAACTTTTGTGATGACGATGAGTTTCT
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