CK937788

Overview
NameCK937788
Unique NameCK937788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: ILKAP_MOUSE (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.340e-18
Identity = 77/251 (30.68%), Postives = 114/251 (45.42%), Query Frame = 3
Query:  114 LSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVL------SRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            ++  +G R  M+DAH    D+              S+F V+DGHGG   +KF A+ LHQ +++   +  GD++ S +K   R                    +D F    E F+      +A+     W               GSTA   +  D  L +AN GDSR +L      S+K  AL+LSK+H P    E+ RI KAGG ++ GRV G L ++R+IGD ++K        +  VT+ PDI   +L
Sbjct:  111 VAERKGEREEMQDAHVILNDITQECNPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRK--FPKGDII-SVEKTVKRC------------------LLDTFKHTDEEFL-----KQASSQKPAWKD-------------GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYK--------RCGVTSVPDIRRCQL 314          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.668e-18
Identity = 79/249 (31.73%), Postives = 117/249 (46.99%), Query Frame = 3
Query:   96 ENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGR--VNGSLNLARAIGDVEFKLNKSL--PAEKQIVTANPDISTIEL 818
            ENV  G +S  G R   ED    +  L     +F VYDGHGG A A FC  ++ + ++        +L T    AFL +D+                                           ++S     +D    TSG+TA VA++RD  +LVVA+ GDSR +L RKG+ + L+ DH P+ + EK+RI K GGF+    +G+  VNG L + R+IGD++ K +  +  P  K+I   + D S + L
Sbjct:   93 ENV--GCASQIGKRKENEDRFD-FAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEK-NLETLLTLAFLEIDKA------------------------------------------FSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVL 295          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.668e-18
Identity = 77/251 (30.68%), Postives = 114/251 (45.42%), Query Frame = 3
Query:  114 LSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVL------SRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            ++  +G R  M+DAH    D+              S+F V+DGHGG   +KF A+ LHQ +++   +  GD++ S +K   R                    +D F    E F+      +A+     W               GSTA   +  D  L +AN GDSR +L      S+K  AL+LSK+H P    E+ RI KAGG ++ GRV G L ++R+IGD ++K        +  VT+ PDI   +L
Sbjct:  111 VAERKGEREEMQDAHVILNDITQECNPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRK--FPKGDVI-SVEKTVKRC------------------LLDTFKHTDEEFL-----KQASSQKPAWKD-------------GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYK--------RCGVTSVPDIRRCQL 314          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: ILKAP_BOVIN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18
Identity = 76/251 (30.28%), Postives = 110/251 (43.82%), Query Frame = 3
Query:  114 LSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVL------SRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            ++  +G R  M+DAH    D+ +            S+F V+DGHGG   +KF A+ LHQ +++      G  V    K  L                     +D F    E F+      +A+     W               GSTA   +  D  L +AN GDSR +L      S+K  AL+LSK+H P    E+ RI KAGG ++ GRV G L ++R+IGD ++K        +  VT+ PDI   +L
Sbjct:   89 VAERKGEREEMQDAHVILNDITAECQPPSALVTRVSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDGISVEKTVKRCL---------------------LDTFKHTDEEFL-----KQASSQKPAWKD-------------GSTATCVLAVDNTLYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYK--------RCGVTSVPDIRRCQL 292          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.263e-17
Identity = 73/243 (30.04%), Postives = 105/243 (43.21%), Query Frame = 3
Query:   90 QNENVRYGLSSMQGWRATMEDAHAAYPD--LDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI 803
            QN    YG +S  G R++MED +    D         FGV+DGHGG   A++  + L   +++H  + + D   +   A+ + D                                          +   SE   + D     +GSTA  AI+   +L+VAN GDSR V+ R G A+ +S+DHKPD   E+ RI  AGGF+      RV G L ++RA GD            KQ V A+P+I
Sbjct:   28 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFIS-DTTAAIADAYNQTDS-----------------------------------------EFLKSENSQNRD-----AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD---------RLLKQYVVADPEI 214          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.263e-17
Identity = 76/252 (30.16%), Postives = 115/252 (45.63%), Query Frame = 3
Query:   78 SEDGQNENVRYGLSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            S+DG+   +  G SS +G RA MED +        D+  + FG++DGHGG   A+   K+L + +LKH ++   D  ++  + + + D                D +D                E N + +D                GSTA  AI     + VAN GDSR V+S+ G+A+ LS DHKP+ + E+ RI  AGG +      RV G L ++RA G      N+ L   K+ V A P++   E+
Sbjct:  109 SDDGR---MSCGYSSFRGRRANMEDFYDIKSSKVDDNQINLFGIFDGHGGSHAAEHLKKHLFENLLKHPSFIT-DTKSAISETYRKTDS---------------DFLD---------------AETNINRED----------------GSTASTAIFVGNHIYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIENAGGVVTWSGTWRVGGVLAMSRAFG------NRFL---KRFVVAEPEVQEQEI 301          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17
Identity = 75/255 (29.41%), Postives = 116/255 (45.49%), Query Frame = 3
Query:   72 KFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSST--SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLSKDHKPDLEVEKDRILKAGGFIQVG---RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            +FS+  + ++    + S+QG R  MED      DL + T  S FG++DGHGG+  A++    L + + +H      D     + + L    ++  Q     L+I  + ++K +   +                                +G+T  +A++ DK L VAN GDSR VL  K G A+ LS DHKP    E+ RI +AGGFI      RV G L ++R++GD   K          +V  +PDI T +L
Sbjct:   81 EFSKTWEFKSHNVAVYSIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQH----LQDYEKDKENSVLTYQTILEQQI----LSIDREMLEKLTVSYD-------------------------------EAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDL 289          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1K_PONAB (Protein phosphatase 1K, mitochondrial OS=Pongo abelii GN=PPM1K PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17
Identity = 73/224 (32.59%), Postives = 106/224 (47.32%), Query Frame = 3
Query:   96 ENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGR--VNGSLNLARAIGDVEFK 749
            ENV  G +S  G R   ED    +  L     +F VYDGHGG A A FC  ++ + ++        +L T    AFL +D+                                           ++S     +D    TSG+TA VA++RD  +LVVA+ GDSR +L RKG+ + L+ DH P+ + EK+RI K GGF+    +G+  VNG L + R+IGD++ K
Sbjct:   93 ENV--GCASQIGKRKENEDRFD-FAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEK-NLETLLTLAFLEIDKA------------------------------------------FSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLK 270          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17
Identity = 77/248 (31.05%), Postives = 114/248 (45.97%), Query Frame = 3
Query:  111 GLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVL----KHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGR--VNGSLNLARAIGDVEFKLNKSL--PAEKQIVTANPDISTIEL 818
            G +S  G R   ED    +  L +   +F VYDGHGG A A FC  ++ + +L    K E     +L T    AFL +D+           A L                                           TSG+TA VA++RD  +LV+A+ GDSR +L RKG+ + L+ DH P+ + EK+RI K GGF+    +G+  VNG L + R++GD++ K +  +  P  K+I   + D S + L
Sbjct:   96 GSASQIGKRKENEDRFG-FAQLTNEVLYFAVYDGHGGPAAADFCHTHMEKCILDLLPKEE-----NLETVLTLAFLEIDKTFARHAHLSADATL------------------------------------------LTSGTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVL 295          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17
Identity = 79/254 (31.10%), Postives = 115/254 (45.28%), Query Frame = 3
Query:   57 TPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACV-AIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANP 797
            TP+ E  S   + E   Y +   +G R  MED  +A  +L  D   + FGVYDGHGG   A+F AK L   +L       G++V    ++  +++E ++                             +G  A D   ++  E+           G + CV A+I D  LVVANAGD R VLS  G A  L+ DH+P  + E++RI  +GG++     V R+ GSL ++R IGD   K       E  I+  NP
Sbjct:  108 TPREE--SRAVEREGDGYSVYCKRGKREAMEDRFSAITNLQGDPKQAIFGVYDGHGGPTAAEFAAKNLCSNIL-------GEIVGGRNES--KIEEAVK-----------------------------RGYLATD--SEFLKEKN--------VKGGSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQWIISEPEINILRINP 311          
The following BLAST results are available for this feature:
BLAST of CK937788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
ILKAP_MOUSE4.340e-1830.68Integrin-linked kinase-associated serine/threonine... [more]
PPM1K_HUMAN5.668e-1831.73Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
ILKAP_RAT5.668e-1830.68Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_BOVIN9.668e-1830.28Integrin-linked kinase-associated serine/threonine... [more]
P2C59_ARATH1.263e-1730.04Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C07_ORYSJ1.263e-1730.16Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
PPM1L_MOUSE1.649e-1729.41Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
PPM1K_PONAB1.649e-1732.59Protein phosphatase 1K, mitochondrial OS=Pongo abe... [more]
PPM1K_BOVIN1.649e-1731.05Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
P2C02_ARATH1.649e-1731.10Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937788 ID=CK937788; Name=CK937788; organism=Citrus sinensis; type=EST; length=839bp
GGGGAGATCTCATTATCTCTCTGCTCAAAGTAAAGAAAATGGGGGTATAT
CTGAGCACCCCCAAGACTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAA
TGTTCGATATGGATTGTCGTCGATGCAGGGGTGGCGTGCGACCATGGAAG
ATGCTCATGCAGCTTATCCAGATTTGGACAGTTCTACATCTTTCTTTGGT
GTTTATGATGGCCACGGTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTA
TCTTCACCAGCAGGTGCTCAAACATGAAGCTTATTCAGCTGGAGATTTAG
TCACTTCAGCACAGAAAGCTTTTCTCAGAATGGATGAGATGATGCGTGGA
CAAAGGGGATGGAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTT
TTCTGGCATGATTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCA
ATGATCATTTTGACGATTGGACATCGGAGGAGGGTCCTCACTCAGATTTT
CATGGACCAACTTCTGGAAGTACAGCTTGCGTAGCAATCATTAGAGACAA
GCAACTCGTGGTTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCGAGGA
AGGGCCAGGCACTTAATCTATCTAAAGACCATAAGCCTGATCTTGAGGTT
GAGAAAGATAGAATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGT
TAATGGAAGTTTAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGC
TAAACAAAAGTTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGAT
ATAAGTACTATTGAACTTTTGTGATGACGATGAGTTTCT
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