CK937788

Overview
NameCK937788
Unique NameCK937788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.016e-15
Identity = 66/221 (29.86%), Postives = 102/221 (46.15%), Query Frame = 3
Query:  105 RYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGR--VNGSLNLARAIGDVEFK 749
            + G S+  G R   ED       L     +F VYDGHGG + A+FC +++   +                                +E  +    M+K   +++ F+   K    + H            D    T G+TA VA++RD  +LVVA+ GDSR +L R+G+   L+ DH P+ + EK RI K+GGF+    +G+  VNG L + R+IGD++ K
Sbjct:   95 KVGCSTQLGKRKENEDRFKL-ARLTPDILYFAVYDGHGGASAAEFCDRFMEDYI--------------------------------KEFLVEEHDMEKV--LVKAFLEINKAFARHAHLS---------VDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLK 271          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.229e-14
Identity = 83/263 (31.56%), Postives = 110/263 (41.83%), Query Frame = 3
Query:   54 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMR---GQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACV-AIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTI 812
            S P+ E   EDG+   V Y        R  MED H A   L  D   +FFGV+DGHGGK                    SA + V      F+  +EM +   G  G  E A+    +                          T EE    +     SG   CV A+++   LVV+NAGD R VLSR G+A  L+ DH+   E E++RI   GGF+       RV GSL ++R IGD            KQ V ++PD +T+
Sbjct:  117 SDPRNE-VEEDGEEFAV-YCRRGKGRRRVEMEDRHVAKVALGGDPKVAFFGVFDGHGGK--------------------SAAEFVAENMPKFMA-EEMCKVDGGDSGETEQAVKRCYLK-------------------------TDEEFLKRE----ESGGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHL---------KQWVVSDPDTTTL 318          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.911e-14
Identity = 75/260 (28.85%), Postives = 113/260 (43.46%), Query Frame = 3
Query:  102 VRYGLSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYS---------AGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI-QVGRVNGSLNLARAIGDVEFKLNK-------SLPAEKQIVTANPD 800
            +R G  +  G +  MED H    DL S           ++F+ V+DGHGG   A +  +   +   + E +            ++ TS + AFL+ D           LA+                                +E+   SD    + G+TA  A+I  + L+VANAGD R VL RKG+A+++S+DHKP   +E+ R+ ++GGFI   G +N  L + RA+GD + KL         S P  KQI     D
Sbjct:   77 IRSGSFADIGPKRNMEDEHIRIDDLSSQVGSLFELPKPSAFYAVFDGHGGPEAAAYVRENAIRFFFEDEQFPQTSEVSSVYVEEVETSLRNAFLQAD-----------LAL--------------------------------AEDCSISD----SCGTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDGYLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQITLTEDD 289          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13
Identity = 75/264 (28.41%), Postives = 106/264 (40.15%), Query Frame = 3
Query:   54 STPKTEKFSEDGQNENVRYGLSSMQGWRA-TMEDAHAAYPDLDSS--TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRD-KQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI-----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            S+  T K      +  V +G   ++G     MED H A    D S     F ++DGH G +V  +    L   +LK   +      T+ Q+A          +  +R                            N +  +   + GP         GSTA  AI+ D K + VAN GDSR V+  +G A  L+ DH+P    E+ RI K GGF+      V RVNG L +ARA GD   K + S   + + V  N  I  + L
Sbjct:   53 SSTDTGKGRSKQSSNKVTHGFHLVEGKSGHDMEDYHVAEYKYDKSHELGLFAIFDGHLGDSVPSYLKANLFCNILKEPIFW-----TNPQEAI---------KNAYRS--------------------------TNKYILENAKQLGP--------GGSTAVTAIVVDGKDMWVANVGDSRAVVCERGAANQLTVDHEPHTTNERQRIEKQGGFVTTFPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPINSSIEFVIL 268          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.490e-13
Identity = 63/252 (25.00%), Postives = 103/252 (40.87%), Query Frame = 3
Query:   99 NVRYGLSSMQG-WRATMEDAHAAYPDLDSST-----------SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL 818
            N+  G  + +G +R  MED H    DL               +F+GV+DGHGG   +++  +       +   +     V  +    L + E+    R    LA L  + ++                                     + G+TA  A++  + L+VAN GD R VL RKG+A+++S DHK   E E+ R+   GG+ +   + G L + RA+GD   K    L      + ++PDI  + L
Sbjct:  115 NISSGSYADKGDYREYMEDEHICIDDLSDHLGSSFYRFPVPMAFYGVFDGHGGSDASQYIKENAMSLFFEDAVFRQSPSVVDS----LFLKELETSHREAYRLADLAMEDERIVSS---------------------------------SCGTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVEDLGGYFEGEYLYGDLAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMIL 329          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12
Identity = 81/265 (30.57%), Postives = 105/265 (39.62%), Query Frame = 3
Query:  102 VRYGLSSMQGWRATMEDAHAAYPD----LDSSTS-FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFS-GMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHK----------------------------------------PDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFK 749
            V +G  S+ G    MEDA +  P     LD S   FF V+DGHGG  V+  C + +H  V       A ++V  A+ A LR  +    +    E A+ G  + +   G   G      GG              P S   G   GSTA VA++   +LVV+N GDSR VL R G  L LS DHK                                        PD   EK RI   GG   ++   RV G L ++RA+GD   K
Sbjct:  112 VAFGSVSLAGRMRDMEDAVSLRPSFCTWLDGSPMHFFAVFDGHGGPHVSALCREQMHVIV-------AEEMV--AEAAALRQRQPAAMEEEEEERAVAGGAVAELRPGGRAG------GGGVRVRARHRAGVPCPLSGQTGAIIGSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLSSDHKGLNPSLSWRGTRVALARGTWGDKTGQSVGPAALLLSGGAHPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALGDKYLK 361          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.711e-11
Identity = 69/231 (29.87%), Postives = 99/231 (42.86%), Query Frame = 3
Query:   96 ENVRYGLSSMQGWRA-TMED-AHAAYPDLDS-STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRD-KQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI-----QVGRVNGSLNLARAIGDVEFKLNKS 761
            +N+ +G   ++G  +  MED   + +  L+      F ++DGH G  VAK+    L   +LK + +   D   + + A+   D ++  Q                         S K G+                       GSTA   I+ D K+LVVAN GDSR V+S+ G A  LS DH+P    EK  I   GGF+      V RV+G L +ARA GD   KL+ S
Sbjct:   32 KNITHGFHCVKGKSSHPMEDYVVSEFKKLEGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWT-DTENAIRNAYRSTDAVILQQ-------------------------SLKLGKG----------------------GSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEP--SKEKKEIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKLHLS 212          
BLAST of CK937788 vs. ExPASy Swiss-Prot
Match: P2C76_ORYSJ (Putative protein phosphatase 2C 76 OS=Oryza sativa subsp. japonica GN=Os11g0586100 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.764e-11
Identity = 76/263 (28.90%), Postives = 113/263 (42.97%), Query Frame = 3
Query:  201 VYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKF----SGMIEGFIWS-PKGGEANDHFD-------------DWT-SEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLS--------------------RKGQALN------------------LSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLP----AEKQIVTAN 794
            V+DGH G   ++  +K L +  L H  Y   D + S       M     G+  ++E+ IL + ++ +    S   +G  W+ P   + + H +             D T S+E   ++F    SGSTA V +I D Q++ AN GDS+  L                     RK  + N                  L+KDH PD E E+ R+  AGG++     V RVNG L L+RAIGDV +K    +P     E Q ++AN
Sbjct:  136 VFDGHNGAEASEMASKLLLEYFLLH-VYFLLDGIYSI------MFRKSTGKLTYKEVTILNNVINLYKEDQSSHSKGSCWALPAILDRSFHMEVLKESLLRAVHDVDLTFSKEALRNNFE---SGSTAAVILIVDGQIIAANVGDSKAFLCSESHDSSIDKKTSVVSGKRRRKRNSNNRDDFALANYDGPFYNVKELTKDHHPDREDERSRVEAAGGYVLEWAGVHRVNGELALSRAIGDVPYKRYGVIPTPELTEWQSLSAN 388          
The following BLAST results are available for this feature:
BLAST of CK937788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PPM1K_XENLA2.016e-1529.86Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
P2C32_ORYSJ2.229e-1431.56Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
P2C49_ARATH2.911e-1428.85Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
P2C44_ORYSJ4.203e-1328.41Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C43_ARATH5.490e-1325.00Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C37_ORYSJ2.086e-1230.57Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]
P2C58_ARATH6.711e-1129.87Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C76_ORYSJ8.764e-1128.90Putative protein phosphatase 2C 76 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937788 ID=CK937788; Name=CK937788; organism=Citrus sinensis; type=EST; length=839bp
GGGGAGATCTCATTATCTCTCTGCTCAAAGTAAAGAAAATGGGGGTATAT
CTGAGCACCCCCAAGACTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAA
TGTTCGATATGGATTGTCGTCGATGCAGGGGTGGCGTGCGACCATGGAAG
ATGCTCATGCAGCTTATCCAGATTTGGACAGTTCTACATCTTTCTTTGGT
GTTTATGATGGCCACGGTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTA
TCTTCACCAGCAGGTGCTCAAACATGAAGCTTATTCAGCTGGAGATTTAG
TCACTTCAGCACAGAAAGCTTTTCTCAGAATGGATGAGATGATGCGTGGA
CAAAGGGGATGGAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTT
TTCTGGCATGATTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCA
ATGATCATTTTGACGATTGGACATCGGAGGAGGGTCCTCACTCAGATTTT
CATGGACCAACTTCTGGAAGTACAGCTTGCGTAGCAATCATTAGAGACAA
GCAACTCGTGGTTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCGAGGA
AGGGCCAGGCACTTAATCTATCTAAAGACCATAAGCCTGATCTTGAGGTT
GAGAAAGATAGAATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGT
TAATGGAAGTTTAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGC
TAAACAAAAGTTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGAT
ATAAGTACTATTGAACTTTTGTGATGACGATGAGTTTCT
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