CK937781

Overview
NameCK937781
Unique NameCK937781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_HELPJ (Cystathionine gamma-synthase OS=Helicobacter pylori J99 GN=metB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.636e-45
Identity = 94/248 (37.90%), Postives = 152/248 (61.29%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            VL   G++ T+ID   +  ++ A+  N  +L+  E+P+NP L+  D+   + +  +   +  +D TFATP  Q  L LG D+V H+ TK++GGH+DV+AG ++  +E L  +     + +GG L    ++L+ RG+KTL LR++     AL +A+ LE HPKV+RV+YPGL +HP H +A  QM GF G+ SF +  D  A + F+++LK+  +  S GG ES+V  PA+M++  + +++R   GI D
Sbjct:  108 VLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYL-ETPSNPLLKITDLAQCASVAKEHNLLTIVDNTFATPYCQNPLLLGTDIVAHNGTKYLGGHSDVVAGLVTTNNEALAQEFDFFQNAIGGVLGLQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVERVYYPGLPTHPNHELAKAQMRGFSGMFSFTLKNDSEA-VAFVESLKLFILGESLGGVESLVGIPALMTHACIPKAQREAAGIRD 353          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CGL_PIG (Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.308e-44
Identity = 96/249 (38.55%), Postives = 155/249 (62.25%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            V    G+  + +D    + LEAA+      L + E+PTNP L+ +D++  + + HK G I+ + D TF +   Q+ L+LGAD+ ++SATK++ GH+DV+ G +S  SE L +++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE+HP V++V YPGL SHP+H +A +Q TG  G++SF + G L     F+ +LK+  +A S GG ES+ + PAIM++  + +S+R   GI D
Sbjct:  124 VAAEFGLKISFVDCSKSKLLEAAITPET-KLVWIETPTNPILKMIDIEACAQIVHKHGDIILVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSLNSETLHSRLRFLQNSLGAVPSPIDCYLCNRGLKTLQVRMEKHFENGMAVAQFLESHPLVEKVIYPGLPSHPQHELAKRQCTGCPGMISFYIKGSLHHAETFLKSLKLFTLAESLGGYESLAELPAIMTHSSVPKSDREVLGIRD 371          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METC_BACSU (Cystathionine beta-lyase metC OS=Bacillus subtilis GN=metC PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44
Identity = 97/248 (39.11%), Postives = 142/248 (57.26%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            VL   GI  T +D      +  ++  N   + + E+P+NP L   D+K V  L  + G +  +D TF TP  Q+ L LG D+VLHSATKF+ GH+DVL+G  +   E+L  Q+  L +  G  L     +L++RG+KTL +R+++ + TA R+A+  + HP VKRV+YPGL  HP       Q TG G V+SFE++    A  K ++ + +P  A S G  ESI+  PA MS+  + + ER K GI D
Sbjct:  113 VLTRFGIEHTFVDMTDRNEVARSIKPNT-KVIYMETPSNPTLGITDIKAVVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLHSATKFLSGHSDVLSGLAAVKDEELGKQLYKLQNAFGAVLGVQDCWLVLRGLKTLQVRLEKASQTAQRLAEFFQKHPAVKRVYYPGLADHPGAETHKSQSTGAGAVLSFELESK-EAVKKLVENVSLPVFAVSLGAVESILSYPATMSHAAMPKEEREKRGITD 358          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CGL_MACFA (Cystathionine gamma-lyase OS=Macaca fascicularis GN=CTH PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.806e-44
Identity = 95/249 (38.15%), Postives = 157/249 (63.05%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            V    G+  + +D   ++ LEAA+      L + E+PTNP L+ +D++  + + HK+G I+ + D TF +P  Q+ L+LGAD+ + SATK++ GH+DV+ G +S   E+L  ++R L + LG   +P   YL  RG+KTLH+R+++     + +A+ LE++P V++V YPGL SHP+H +A +Q TG  G+++F + G L     F+  LK+  +A S GG ES+V+ PAIM++  + +++R   GI D
Sbjct:  124 VASEFGLKISFVDCSKIKLLEAAITPET-KLVWIETPTNPVLKMIDIEACAHIVHKRGDIILVVDNTFMSPYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVNCERLHNRLRFLQNSLGAVPSPLDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPGVEKVIYPGLPSHPQHELAKRQCTGCTGMITFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLVELPAIMTHASVPKNDRDVLGISD 371          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CGL2_CAEEL (Putative cystathionine gamma-lyase 2 OS=Caenorhabditis elegans GN=cth-2 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.224e-42
Identity = 91/250 (36.40%), Postives = 149/250 (59.60%), Query Frame = 1
Query:    7 LPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA--IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-YISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 747
            +P  G+    +D   ++ LE A+  N   ++F ESP+NP L+ VD+  V     K     +V +D TF +P  Q+ +SLGAD+V+HS TK+I GH+DV+ G  I+ +++    +  +   +G   +P   +L+ RG+KTLH+R++     AL +AK LEA+ +++ V YP L SHP+H +  +Q  G  G++SF + G+L  +  F+ ALK+  +A S GG ES+ + P+IM++  +    R+  GI DN
Sbjct:  115 VPNHGLEVDSVDLTDVQNLEKAIKPNTKMVWF-ESPSNPLLKVVDIAAVVQTAKKANPEIVVVVDNTFMSPYFQRPISLGADVVVHSITKYINGHSDVVMGAVITDNDEFQQHLFFMQLAVGAVPSPFDCFLVNRGLKTLHIRMRAHYENALAVAKYLEANDRIESVLYPALPSHPQHEVHEKQTKGMSGMISFYLKGELQESRAFLSALKVFTLAESLGGYESLAELPSIMTHASVPAETRIVLGITDN 363          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CGL_RAT (Cystathionine gamma-lyase OS=Rattus norvegicus GN=Cth PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.599e-42
Identity = 94/249 (37.75%), Postives = 151/249 (60.64%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            V    G+  + +D    + LEAA+      L + E+PTNP L+  D+K  + + HK K  I+ +D TF +   Q+ L+LGAD+ + SATK++ GH+DV+ G +S  S+ L  ++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE++P+V++V YPGL SHP+H +A +Q TG  G+VSF + G L     F+  +K+  +A S GG ES+ + PAIM++  + + +R   GI D
Sbjct:  123 VASEFGLKISFVDCSKTKLLEAAITPQT-KLVWIETPTNPTLKLADIKACAQIVHKHKDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVTSDDLNERLRFLQNSLGAVPSPFDCYLCCRGLKTLQIRMEKHFRNGMAVARFLESNPRVEKVIYPGLPSHPQHELAKRQCTGCPGMVSFYIKGTLQHAQVFLKNIKLFALAESLGGYESLAELPAIMTHASVPEKDRATLGISD 370          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CGL_BOVIN (Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.599e-42
Identity = 95/249 (38.15%), Postives = 153/249 (61.45%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            V    G+  + +D    + LEAA+      L + E+PTNP L+ +D++  +   HK G I+ + D TF +   Q+ LSLGAD+ ++SATK++ G++DV+ G +S  SE L  ++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE++P+V++V YPGL SHP+H +A +Q TG  G+V+F + G L     F+  LK+  +A S GG ES+ + PAIM++  + +S+R   GI D
Sbjct:  124 VATEFGLKISFVDCSKPKLLEAAITPET-KLVWIETPTNPSLKMIDIEACAHTVHKHGDIILVVDNTFMSAYFQRPLSLGADICMYSATKYMNGYSDVVMGLVSLNSESLHDRLRFLQNSLGAVPSPIDCYLCNRGLKTLQVRMEKHFENGMAVAQFLESNPQVEKVIYPGLPSHPQHELAKRQCTGCPGMVTFYIKGSLQHAETFLQNLKLFTLAESLGGYESLAELPAIMTHASVPKSDREVLGISD 371          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_MYCLE (Cystathionine gamma-synthase OS=Mycobacterium leprae GN=metB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.563e-42
Identity = 97/256 (37.89%), Postives = 142/256 (55.47%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-YISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE--------RLKYGIMD 744
            V     +  T +    ++ + AA+ +    L + E+PTNP L   D+  + +L  K    V +D TFA+P  Q+ L LGAD+VLHS TK+IGGH+DV+ G  ++  E+L      L +  G   +P  AYL +RG+KTL LR+Q+ N  A+ +A+ L  HP V  V YPGL SHP H +A +QM GFGG+VS  +     A        K+  +A S GG ES+++QP+ M++   + S+        RL  GI D
Sbjct:  121 VFTQWNVDYTPVPLSDLDAVRAAITSRT-RLIWVETPTNPLLSIADITSIGELGKKHSVKVLVDNTFASPALQQPLMLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQAFGFLQNGAGAVPSPFDAYLTMRGLKTLVLRMQRHNENAITVAEFLAGHPSVSAVLYPGLPSHPGHEVAARQMRGFGGMVSLRMRAGRLAAQDLCARTKVFTLAESLGGVESLIEQPSAMTHASTTGSQLEVPDDLVRLSVGIED 375          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CGL_MOUSE (Cystathionine gamma-lyase OS=Mus musculus GN=Cth PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.563e-42
Identity = 93/249 (37.35%), Postives = 151/249 (60.64%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            V    G+  + +D    + LEAA+      L + E+PTNP L+  D+   + + HK+G I+ + D TF +   Q+ L+LGAD+ + SATK++ GH+DV+ G +S  S+ L +++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE +P+V++V YPGL SHP+H +A +Q +G  G+VSF + G L     F+  LK+  +A S GG ES+ + PAIM++  + + +R   GI D
Sbjct:  123 VASEFGLKISFVDCSKTKLLEAAITPQT-KLVWIETPTNPTLKLADIGACAQIVHKRGDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVNSDDLNSRLRFLQNSLGAVPSPFDCYLCCRGLKTLQVRMEKHFKNGMAVARFLETNPRVEKVVYPGLPSHPQHELAKRQCSGCPGMVSFYIKGALQHAKAFLKNLKLFTLAESLGGYESLAELPAIMTHASVPEKDRATLGIND 370          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METC_ARATH (Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana GN=At3g57050 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.077e-42
Identity = 88/249 (35.34%), Postives = 146/249 (58.63%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 747
            V+P  G+    ++   ++ + AA+      L + ESPTNP  +  D++ +S++ H +GA+V +D +  +P+  + L LGAD+V+HSATKFI GH+DV+AG ++   EKL  ++  L +  G  L P   +L +RG+KT+ LR+++Q   A ++A  L +HP+VK+V+Y GL  HP HH+   Q  G G V SF + G +  +   ++  K   IA SFG  +S++  P  MS+  +    R   G+ ++
Sbjct:  191 VVPRSGVVVKRVNTTKLDEVAAAIGPQT-KLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSF-ITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTED 437          
The following BLAST results are available for this feature:
BLAST of CK937781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
METB_HELPJ2.636e-4537.90Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
CGL_PIG1.308e-4438.55Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=... [more]
METC_BACSU2.231e-4439.11Cystathionine beta-lyase metC OS=Bacillus subtilis... [more]
CGL_MACFA3.806e-4438.15Cystathionine gamma-lyase OS=Macaca fascicularis G... [more]
CGL2_CAEEL1.224e-4236.40Putative cystathionine gamma-lyase 2 OS=Caenorhabd... [more]
CGL_RAT1.599e-4237.75Cystathionine gamma-lyase OS=Rattus norvegicus GN=... [more]
CGL_BOVIN1.599e-4238.15Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=... [more]
METB_MYCLE3.563e-4237.89Cystathionine gamma-synthase OS=Mycobacterium lepr... [more]
CGL_MOUSE3.563e-4237.35Cystathionine gamma-lyase OS=Mus musculus GN=Cth P... [more]
METC_ARATH6.077e-4235.34Cystathionine beta-lyase, chloroplastic OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A01 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937781 ID=CK937781; Name=CK937781; organism=Citrus sinensis; type=EST; length=748bp
GGGGTTCTGCCCACAATGGGAATCACGGCTACGGTGATTGACCCNNNNNN
TATGGAAGGTTTGGAGGCAGCACTCAACAATAACAATGTCTCACTATTCT
TCACCGAGTCTCCAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTG
GTTTCAGATCTTTGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAAC
CTTCGCCACACCTCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTG
TACTGCACTCTGCAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCT
GGGTACATTAGTGGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCA
TCATGTTTTGGGTGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTC
GAGGCATGAAGACATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCG
TTGAGGATGGCCAAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCA
CTATCCAGGCTTGAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAA
TGACTGGTTTTGGTGGGGTAGTTAGTTTTGAGGTTGATGGAGACCTAACG
GCCACCATGAAATTTATTGATGCCTTGAAAATCCCATATATTGCTCCATC
CTTCGGTGGCTGTGAGAGCATTGTTGATCAGCCAGCTATAATGTCGTATT
GGGACCTTAGCCAATCGGAGAGGCTCAAGTATGGGATTATGGATAACT
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