CK937781

Overview
NameCK937781
Unique NameCK937781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CGL_HUMAN (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 7.936e-42
Identity = 93/249 (37.35%), Postives = 153/249 (61.45%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            V    G+  + +D   ++ LEAA+      L + E+PTNP  + +D++  + + HK G I+ + D TF +P  Q+ L+LGAD+ ++SATK++ GH+DV+ G +S   E L  ++R L + LG   +P   YL  RG+KTLH+R+++     + +A+ LE++P V++V YPGL SHP+H +  +Q TG  G+V+F + G L     F+  LK+  +A S GG ES+ + PAIM++  + +++R   GI D
Sbjct:  124 VASEFGLKISFVDCSKIKLLEAAITPET-KLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISD 371          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_MYCTU (Cystathionine gamma-synthase OS=Mycobacterium tuberculosis GN=metB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.553e-40
Identity = 91/226 (40.27%), Postives = 131/226 (57.96%), Query Frame = 1
Query:   94 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-YISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE--------RLKYGIMD 744
            L + E+PTNP L   D+  +++L   + A V +D TFA+P  Q+ L LGAD+VLHS TK+IGGH+DV+ G  ++  E+L  +   L +  G    P  AYL +RG+KTL LR+Q+ +  A  +A+ L  HP V  V YPGL SHP H IA +QM GFGG+VS  +     A        ++  +A S GG ES+++ P+ M++   + S+        RL  GI D
Sbjct:  150 LIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEIAARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIED 375          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_MYCBO (Cystathionine gamma-synthase OS=Mycobacterium bovis GN=metB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.553e-40
Identity = 91/226 (40.27%), Postives = 131/226 (57.96%), Query Frame = 1
Query:   94 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-YISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE--------RLKYGIMD 744
            L + E+PTNP L   D+  +++L   + A V +D TFA+P  Q+ L LGAD+VLHS TK+IGGH+DV+ G  ++  E+L  +   L +  G    P  AYL +RG+KTL LR+Q+ +  A  +A+ L  HP V  V YPGL SHP H IA +QM GFGG+VS  +     A        ++  +A S GG ES+++ P+ M++   + S+        RL  GI D
Sbjct:  150 LIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEIAARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIED 375          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_HERAU (Probable cystathionine gamma-synthase (Fragment) OS=Herpetosiphon aurantiacus GN=metB PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.401e-38
Identity = 79/211 (37.44%), Postives = 129/211 (61.14%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKI 633
            V+   G++   ID    E + AA+  N   L + E+PTNP L+   +  ++ +  + G    +D TFA+P NQ+ ++LGAD+VLHS TK+IGGH+DV+ G I + +++L  +++ L +  G    P   +L++RG+KTL +R++     AL +A+ L  HP V++V YPGL SHP+H++A +QM GFGG++S  + G   A    +   K+
Sbjct:  110 VMTEHGLSFDFIDMADPEAVRAAIKPNT-RLIWLETPTNPLLKLAPIAAITRVAREHGIWTIVDNTFASPYNQRPITLGADMVLHSTTKYIGGHSDVVGGAIMTSNDELYEKLKFLQNAAGAVPGPFDCWLVLRGVKTLSIRMRDDERNALAIAQFLTEHPGVEKVIYPGLPSHPQHNLAREQMRGFGGMISILLKGGAEAANAMVSKTKL 319          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_ECOLI (Cystathionine gamma-synthase OS=Escherichia coli (strain K12) GN=metB PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.121e-38
Identity = 89/240 (37.08%), Postives = 138/240 (57.50%), Query Frame = 1
Query:   37 IDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYISGSEK-LVTQIR---NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            +D    + L AAL      L   ESP+NP LR VD+  +  L  + GA+  +D TF +P  Q  L+LGADLVLHS TK++ GH+DV+AG +   +  +VT++    N   V GGA +   +YL++RG++TL  R++     A  + K L+  P VK++++P L  +  H IA +Q  GFG ++SFE+DGD     +F+  L +  +A S GG ES++   A M++  ++   R   GI +
Sbjct:  122 VDQGDEQALRAALAEKP-KLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFD---SYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISE 357          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CYS3_YEAST (Cystathionine gamma-lyase OS=Saccharomyces cerevisiae GN=CYS3 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.549e-37
Identity = 87/233 (37.34%), Postives = 141/233 (60.52%), Query Frame = 1
Query:   73 LNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA----IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYISGSEK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTGF--GGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 747
            L   N  L + E+PTNP L+  D++ V+DL  K  A    I+ +D TF +P     L+ GAD+V+HSATK+I GH+DV+ G ++ + K L  +++ L + +G   +P  A+L  RG+KTLHLRV+Q   +A ++A+ L A  + V  V+YPGLK+HP + +  +Q      GG++SF + G   A  KF  + ++  +A S GG ES+++ PA+M++  + +  R   G+ D+
Sbjct:  135 LIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDD 367          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CYSA_STRCO (Putative cystathionine gamma-lyase OS=Streptomyces coelicolor GN=cysA PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.450e-35
Identity = 80/201 (39.80%), Postives = 119/201 (59.20%), Query Frame = 1
Query:   82 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYISGSEK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQ 681
            +   L + E+P+NP L   DV+ + +  H  GA+V +D T ATPL Q+ L LGAD  + S TK + GH DVL GY++G +   +  +R    ++G    P  A+L  R + TL LRV +Q+STAL++A+ L   P++  + YPGL   P H +A+QQM  +G VVSF +     A  +F+DAL++   A SFGG  S  ++
Sbjct:  154 DGAKLLWIETPSNPGLDVCDVRRLVEAAHAGGALVAVDNTLATPLGQRPLELGADFSVASGTKQLTGHGDVLLGYVAGRDAGAMAAVRRWRKIVGAIPGPMEAWLAHRSIATLQLRVDRQDSTALKVAEALRTRPEITGLRYPGLPDDPSHKVASQQMLRYGCVVSFTLPSRARAD-RFLDALRLVEGATSFGGVRSTAER 353          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_HAEIN (Cystathionine gamma-synthase OS=Haemophilus influenzae GN=metB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.734e-33
Identity = 82/227 (36.12%), Postives = 129/227 (56.83%), Query Frame = 1
Query:   61 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGI 738
            +EAA+N N  ++F  E+P+NP +   DV  ++ L  K   ++ +D TF TP+  + L LGAD+V+HS TK+I GHND L G I +  ++L  +I  + +  G  L+P  ++L IRGMKTL LR+++    A  +A+ L+A P+V+ V YP                  GG++SF +  D      F+ ++K+   A S GG ES +  PA  ++ D+ +SER+  GI
Sbjct:  132 IEAAINPNTKAIFI-ETPSNPLMEECDVVEIAKLAKKHNLMLIVDNTFLTPVLSRPLDLGADVVIHSGTKYIAGHNDALVGLIVAKGQELCDRIAYIQNGAGAVLSPFDSWLTIRGMKTLSLRMKRHQENAQAIAEFLKAQPQVESVLYPNK----------------GGMLSFRLQ-DEAWVNTFLKSIKLITFAESLGGTESFITYPATQTHMDIPESERVARGI 340          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_BACSU (Cystathionine gamma-synthase OS=Bacillus subtilis GN=metB PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.365e-32
Identity = 76/219 (34.70%), Postives = 123/219 (56.16%), Query Frame = 1
Query:   85 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-YISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGI 738
            N    F E+PTNP ++  D++ ++ +  + G ++ +D TF TP+ Q+ L LGAD+V+HSATK++GGHND+LAG  +   E+L  ++    + +G  L P  ++L++RGMKTL LR++Q  + A  +A  LE   ++  V YPG                 GG++SF +  +      F+ ALK    A S GG ES +  PA  ++ D+ +  R+  G+
Sbjct:  136 NTKAVFVETPTNPLMQEADIEHIARITKEHGLLLIVDNTFYTPVLQRPLELGADIVIHSATKYLGGHNDLLAGLVVVKDERLGEEMFQHQNAIGAVLPPFDSWLLMRGMKTLSLRMRQHQANAQELAAFLEEQEEISDVLYPGK----------------GGMLSFRLQKEEWVN-PFLKALKTICFAESLGGVESFITYPATQTHMDIPEEIRIANGV 337          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METC_RHIL3 (Putative cystathionine beta-lyase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=metC PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.826e-31
Identity = 78/228 (34.21%), Postives = 128/228 (56.14%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF--EVDGDLTATMK---FIDALKIPYIAPSFGGCESI 672
            +L  +G+      P    G+E  L  +N  L  TE+P +      D+  +S + H+ GA+V +D T+ATP+  + L  G D+ +H++TK+  GH+D+L G +S + +   +++  + VLG    P+ AY I+RG++T+ LR+++   +AL +AK LE    V RV +P L S P HH+  +   G  G+ SF    DG   +  K   F+DAL+I  +  S+GG ES+
Sbjct:  123 MLKRLGVEVEYYHPEIGAGIET-LFRSNTKLVHTEAPGSNTFEMQDIPAISAVAHRHGAVVMMDNTWATPVYFRPLDHGVDISIHASTKYPSGHSDILLGTVSANAEHWERLKEANGVLGICGAPDDAYQILRGLRTMGLRLERHYESALDIAKWLEGRDDVARVLHPALPSFPSHHLWKRDFKGASGIFSFVLAADGPEKSRAKAHAFLDALRIFGLGYSWGGFESL 349          
The following BLAST results are available for this feature:
BLAST of CK937781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CGL_HUMAN7.936e-4237.35Cystathionine gamma-lyase OS=Homo sapiens GN=CTH P... [more]
METB_MYCTU2.553e-4040.27Cystathionine gamma-synthase OS=Mycobacterium tube... [more]
METB_MYCBO2.553e-4040.27Cystathionine gamma-synthase OS=Mycobacterium bovi... [more]
METB_HERAU1.401e-3837.44Probable cystathionine gamma-synthase (Fragment) O... [more]
METB_ECOLI3.121e-3837.08Cystathionine gamma-synthase OS=Escherichia coli (... [more]
CYS3_YEAST1.549e-3737.34Cystathionine gamma-lyase OS=Saccharomyces cerevis... [more]
CYSA_STRCO1.450e-3539.80Putative cystathionine gamma-lyase OS=Streptomyces... [more]
METB_HAEIN6.734e-3336.12Cystathionine gamma-synthase OS=Haemophilus influe... [more]
METB_BACSU4.365e-3234.70Cystathionine gamma-synthase OS=Bacillus subtilis ... [more]
METC_RHIL34.826e-3134.21Putative cystathionine beta-lyase OS=Rhizobium leg... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A01 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937781 ID=CK937781; Name=CK937781; organism=Citrus sinensis; type=EST; length=748bp
GGGGTTCTGCCCACAATGGGAATCACGGCTACGGTGATTGACCCNNNNNN
TATGGAAGGTTTGGAGGCAGCACTCAACAATAACAATGTCTCACTATTCT
TCACCGAGTCTCCAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTG
GTTTCAGATCTTTGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAAC
CTTCGCCACACCTCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTG
TACTGCACTCTGCAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCT
GGGTACATTAGTGGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCA
TCATGTTTTGGGTGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTC
GAGGCATGAAGACATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCG
TTGAGGATGGCCAAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCA
CTATCCAGGCTTGAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAA
TGACTGGTTTTGGTGGGGTAGTTAGTTTTGAGGTTGATGGAGACCTAACG
GCCACCATGAAATTTATTGATGCCTTGAAAATCCCATATATTGCTCCATC
CTTCGGTGGCTGTGAGAGCATTGTTGATCAGCCAGCTATAATGTCGTATT
GGGACCTTAGCCAATCGGAGAGGCTCAAGTATGGGATTATGGATAACT
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