CK937781

Overview
NameCK937781
Unique NameCK937781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: STR3_YEAST (Cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=STR3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.538e-20
Identity = 66/221 (29.86%), Postives = 112/221 (50.68%), Query Frame = 1
Query:   82 NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATPLNQKALSL--GADLVLHSATKFIGGHNDVLAGYI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE--------AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPY--IAPSFGGCESIVDQPAIMSY 699
            + V     ESPTNP  + VD+  +     C      V +D T  + LN   L L  G D+V  SATK++ GH+D++ G I S + ++ +++  + +  G  L+P  ++L++RG+KTL +R+ QQ   A+ +A  LE           K  +  + GL+S+P+  +      G G V+SFE  G    + + + + K+    +  SFG   S++  P  MS+
Sbjct:  147 DKVDCVLLESPTNPLCKVVDIPRILRFVKCISPDTTVVVDNTMMSGLNCNPLQLNPGCDVVYESATKYLNGHHDLMGGVIISKTPEIASKLYFVINSTGAGLSPMDSWLLVRGLKTLGVRLYQQQRNAMILAHWLENSCGFKPTRTNKATKTRFVGLRSNPDFKLHKSFNNGPGAVLSFET-GSFEHSKRLVSSKKLSIWAVTVSFGCVNSLLSMPCKMSH 366          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: YFHE_SCHPO (Uncharacterized trans-sulfuration enzyme C23A1.14c OS=Schizosaccharomyces pombe GN=SPAC23A1.14c PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19
Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   31 TVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYISGSEK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 471
            T ++   ++G   A+   +V   + E+P NP     D+    +L  KKGAI+ +D TFA P  Q AL LGAD V+HSATK++ GH+DVLAG  +  ++  +  ++     LG  L+P  A+L++R ++T  LR+ + +     +A+ L
Sbjct:  135 TGLETSFIDGKCDAIGEGDV--IWLETPLNPLGIAFDIPFYKELAKKKGAILVVDSTFAPPPIQDALVLGADYVVHSATKYLAGHSDVLAGVTASKDRSKILDLKADRAYLGTILHPQQAFLLLRSLRTFPLRIAKHSENGFLVAQHL 280          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: MET7_NEUCR (Cystathionine gamma-synthase OS=Neurospora crassa GN=met-7 PE=3 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11
Identity = 61/238 (25.63%), Postives = 108/238 (45.38%), Query Frame = 1
Query:   52 MEGLEAALNNNNVSL-FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG--YISGSEKLVTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK-SHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMS-YWDLSQSERLKYGIMDN 747
            ++ LE  L +    L  F E P NP L C D+  + +L  K    V +D T  T  N   L   AD+V+ S TK   G  +V+ G    + + +  + +++ +   L     P     + R  +    R+ + N+ A  + ++L+ HP VK ++YP    S   +        G+GG++S  + G   A + F DA++     PS G   ++     +++ Y +L  +E  +YG+  N
Sbjct:  357 LDDLETRLESGERYLALFCEFPGNPLLTCPDLVRIRELADKYEFAVVVDETIGTFANVNVLQF-ADIVVSSLTKIFSGDCNVMGGGAIFNPNSRYYSALKSFVQQQLEDTYWPEDVIFMERNSRDFVARIDRVNANAEAICRVLQDHPLVKTLYYPKYNDSRANYEAVKLPQGGYGGLISVVLKGKKQA-VAFYDAIETAK-GPSLGTNFTLTSPYVLLAHYQELDWAE--QYGVDRN 589          
The following BLAST results are available for this feature:
BLAST of CK937781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
STR3_YEAST6.538e-2029.86Cystathionine beta-lyase OS=Saccharomyces cerevisi... [more]
YFHE_SCHPO9.440e-1935.14Uncharacterized trans-sulfuration enzyme C23A1.14c... [more]
MET7_NEUCR3.252e-1125.63Cystathionine gamma-synthase OS=Neurospora crassa ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A01 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937781 ID=CK937781; Name=CK937781; organism=Citrus sinensis; type=EST; length=748bp
GGGGTTCTGCCCACAATGGGAATCACGGCTACGGTGATTGACCCNNNNNN
TATGGAAGGTTTGGAGGCAGCACTCAACAATAACAATGTCTCACTATTCT
TCACCGAGTCTCCAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTG
GTTTCAGATCTTTGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAAC
CTTCGCCACACCTCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTG
TACTGCACTCTGCAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCT
GGGTACATTAGTGGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCA
TCATGTTTTGGGTGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTC
GAGGCATGAAGACATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCG
TTGAGGATGGCCAAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCA
CTATCCAGGCTTGAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAA
TGACTGGTTTTGGTGGGGTAGTTAGTTTTGAGGTTGATGGAGACCTAACG
GCCACCATGAAATTTATTGATGCCTTGAAAATCCCATATATTGCTCCATC
CTTCGGTGGCTGTGAGAGCATTGTTGATCAGCCAGCTATAATGTCGTATT
GGGACCTTAGCCAATCGGAGAGGCTCAAGTATGGGATTATGGATAACT
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