CK937778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_HUMAN (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo sapiens GN=NFU1 PE=1 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 5.373e-55 Identity = 118/221 (53.39%), Postives = 153/221 (69.23%), Query Frame = 1 Query: 151 LSNPITSQNSTLLKSIPLSSSVQSGKWNL---FRVQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTK-SEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 L NP T +K PL VQ + L F R MFIQTQ TPNP+SL F PGKPV+E + DFP AA SPLA+ L+ ++G+ VFFG FITVTK +E+ W+LLKP+I+A IMDF++SG PL + ET + + A +E+D E VAMIKELL+TRIRP VQ+DGGD+ Y+GF E G V+L++QG+C+ CPSS + LK+GI+NML Y+PEV Sbjct: 26 LKNPYT------IKKQPLHQFVQRPLFPLPAAFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPL-VTEETPSGE--AGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGF--EDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEV 235
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROVI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila virilis GN=GJ19011 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 9.166e-55 Identity = 109/188 (57.98%), Postives = 137/188 (72.87%), Query Frame = 1 Query: 241 RVQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 ++ RR+MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ VFFG FIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 69 QISRRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPSGSAAHCSPLAKLLFRVEGVRAVFFGGDFITISKEESGEWGLIKPEVFAVIMDFFASGLPVIHEARPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--ENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 252
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROAN (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila ananassae GN=GF20932 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.483e-54 Identity = 108/184 (58.70%), Postives = 133/184 (72.28%), Query Frame = 1 Query: 253 RTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 R MFIQTQ TPNP SL F PG V+ G+ DFP+ A SPLAK L+ V+G+ VFFG+ FIT++K E W L+KPE+FA IMDF++SG P+ +S A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 65 RNMFIQTQDTPNPESLKFLPGVEVLGKGNTHDFPSGTTAHGSPLAKLLFRVEGVRAVFFGADFITISKEEGAEWSLIKPEVFAVIMDFFASGLPILHESTPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--ENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 244
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROPS (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA22888 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 7.759e-54 Identity = 107/187 (57.22%), Postives = 136/187 (72.73%), Query Frame = 1 Query: 244 VQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 + +R+MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ VFFGS FIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I +DD ETV MIKELL+TRIRP VQ+DGGDI + + E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 62 IGKRSMFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPNA--DTEILDDDDETVMMIKELLDTRIRPTVQEDGGDIVFISY--ENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 244
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROPE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila persimilis GN=GL13432 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 7.759e-54 Identity = 107/187 (57.22%), Postives = 136/187 (72.73%), Query Frame = 1 Query: 244 VQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 + +R+MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ VFFGS FIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I +DD ETV MIKELL+TRIRP VQ+DGGDI + + E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 58 IGKRSMFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPNA--DTEILDDDDETVMMIKELLDTRIRPTVQEDGGDIVFISY--ENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 240
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: YH9J_SCHPO (NifU-like protein C1709.19c OS=Schizosaccharomyces pombe GN=SPBC1709.19c PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.370e-50 Identity = 101/228 (44.30%), Postives = 152/228 (66.67%), Query Frame = 1 Query: 130 YSRTLSYLSNPITSQNSTLLKSIPLSSS--VQSGKWNLFRVQRRTMFIQTQPTPNPSSLMFYPGKPVME--VGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 + R + + S Q T L P+SS+ V + ++ L + R+++I+++ TPN ++L F PG ++ +GS +F + +NSPLA+ L+ +DG+ +FFG FITV+K T W +KPE+F+ IM+ S+G P+ + A DT I E DS+ VAMIKEL+ET IRP++Q+DGGD+E+RGFD +TGTV L+++GAC C SS+V LK+GI+ ML HY+PEV Sbjct: 3 FPRVVPFQSLRTAFQKKTFL---PVSSAGNVFTPRFQLQAI--RSIWIRSEETPNENALKFLPGLDILPPTIGSCEFMRGQGTVNSPLAQKLFDIDGVDSIFFGKDFITVSKGAGTEWAQMKPEVFSVIMEHLSNGSPVLSEEPLKGASDTQILESDSQIVAMIKELIETSIRPSIQEDGGDVEFRGFDEKTGTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYIPEV 225
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_YEAST (NifU-like protein, mitochondrial OS=Saccharomyces cerevisiae GN=NFU1 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 8.639e-29 Identity = 79/218 (36.24%), Postives = 118/218 (54.13%), Query Frame = 1 Query: 208 SSVQSGKWNLFRVQ-RRTMFIQTQPTPNPSSLMFYP--GKPVMEVGSADFPNARAAMN----SPLAKSLY-GVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTA------------INEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 S + GK +F + +R + I+T TPN ++L F G+ + GS N S LA+ ++ G+ + G F+T+ K W+ +KPEI + + G+ + A ++ + E+D E +I+EL++TRIRPA+ +DGGDI+YRG+DP+TGTV LR+QGAC+ C SS V LK GIE+ML HYV EV Sbjct: 4 SVAKLGKSPIFYLNSQRLIHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVESLMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGGYKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSSEVTLKYGIESMLKHYVDEV 221 The following BLAST results are available for this feature:
BLAST of CK937778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937778 ID=CK937778; Name=CK937778; organism=Citrus sinensis; type=EST; length=801bpback to top |