CX675370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675370 vs. ExPASy Swiss-Prot
Match: POL_CAMVS (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14 Identity = 64/256 (25.00%), Postives = 120/256 (46.88%), Query Frame = 1 Query: 16 QFVIVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWIDRVMFLGHIVTKEGISADPAKVEVIVNWERPSSV---TEVRSFLGLAGYYRRFVKGFSSIAAPLTNLTKKNVKFNWDEACEKSFQELKSHLVTAPVLTLPSEGGSFVIYSDASRKGLGCVL----MQHGK----VIAYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYGETCEIFTDHKSLKYLF-------TQKELNLRQRRWL 729 +F V++DDIL++S ++++H H+ ++L+ + + KK + + ++ FLG + EG + +N + P ++ +++ FLG+ Y ++ + I PL K+NV + W + Q++K +L P L P +I +DAS G +L + G + YAS K+ E+NY ++D E A++ +K + YL I TD+ K ++ N+R + WL Sbjct: 396 KFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLG-LEIDEGTHKPQGHILEHIN-KFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWL 649
BLAST of CX675370 vs. ExPASy Swiss-Prot
Match: POL_CAMVE (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14 Identity = 64/256 (25.00%), Postives = 120/256 (46.88%), Query Frame = 1 Query: 16 QFVIVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWIDRVMFLGHIVTKEGISADPAKVEVIVNWERPSSV---TEVRSFLGLAGYYRRFVKGFSSIAAPLTNLTKKNVKFNWDEACEKSFQELKSHLVTAPVLTLPSEGGSFVIYSDASRKGLGCVL----MQHGK----VIAYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYGETCEIFTDHKSLKYLF-------TQKELNLRQRRWL 729 +F V++DDIL++S ++++H H+ ++L+ + + KK + + ++ FLG + EG + +N + P ++ +++ FLG+ Y ++ + I PL K+NV + W + Q++K +L P L P +I +DAS G +L + G + YAS K+ E+NY ++D E A++ +K + YL I TD+ K ++ N+R + WL Sbjct: 396 KFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLG-LEIDEGTHKPQGHILEHIN-KFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWL 649
BLAST of CX675370 vs. ExPASy Swiss-Prot
Match: POL_CAMVD (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) GN=ORF V PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14 Identity = 64/256 (25.00%), Postives = 120/256 (46.88%), Query Frame = 1 Query: 16 QFVIVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWIDRVMFLGHIVTKEGISADPAKVEVIVNWERPSSV---TEVRSFLGLAGYYRRFVKGFSSIAAPLTNLTKKNVKFNWDEACEKSFQELKSHLVTAPVLTLPSEGGSFVIYSDASRKGLGCVL----MQHGK----VIAYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYGETCEIFTDHKSLKYLF-------TQKELNLRQRRWL 729 +F V++DDIL++S ++++H H+ ++L+ + + KK + + ++ FLG + EG + +N + P ++ +++ FLG+ Y ++ + I PL K+NV + W + Q++K +L P L P +I +DAS G +L + G + YAS K+ E+NY ++D E A++ +K + YL I TD+ K ++ N+R + WL Sbjct: 391 KFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLG-LEIDEGTHKPQGHILEHIN-KFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWL 644
BLAST of CX675370 vs. ExPASy Swiss-Prot
Match: POL_CAMVC (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14 Identity = 64/256 (25.00%), Postives = 120/256 (46.88%), Query Frame = 1 Query: 16 QFVIVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWIDRVMFLGHIVTKEGISADPAKVEVIVNWERPSSV---TEVRSFLGLAGYYRRFVKGFSSIAAPLTNLTKKNVKFNWDEACEKSFQELKSHLVTAPVLTLPSEGGSFVIYSDASRKGLGCVL----MQHGK----VIAYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYGETCEIFTDHKSLKYLF-------TQKELNLRQRRWL 729 +F V++DDIL++S ++++H H+ ++L+ + + KK + + ++ FLG + EG + +N + P ++ +++ FLG+ Y ++ + I PL K+NV + W + Q++K +L P L P +I +DAS G +L + G + YAS K+ E+NY ++D E A++ +K + YL I TD+ K ++ N+R + WL Sbjct: 396 KFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLG-LEIDEGTHKPQGHILEHIN-KFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWL 649
BLAST of CX675370 vs. ExPASy Swiss-Prot
Match: POL_CAMVN (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) GN=ORF V PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.441e-13 Identity = 61/256 (23.83%), Postives = 119/256 (46.48%), Query Frame = 1 Query: 16 QFVIVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWIDRVMFLGHIVTKEGISADPAKVEVIVNWERPSSVTE---VRSFLGLAGYYRRFVKGFSSIAAPLTNLTKKNVKFNWDEACEKSFQELKSHLVTAPVLTLPSEGGSFVIYSDASRKGLGCVL----MQHGK----VIAYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYGETCEIFTDHKSLKYLF-------TQKELNLRQRRWL 729 +F V++DDI+++S ++++H H+ ++L+ + + KK + + ++ FLG + EG + +N + P ++ + ++ FLG+ Y ++ + + PL K+NV + W + Q++K +L P L P +I +DAS G +L + G + Y S K+ E+NY ++D E A++ +K + YL I TD+ K ++ N+R + WL Sbjct: 397 KFCCVYVDDIVVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLG-LEIDEGTHKPQGHILEHIN-KFPDTLEDKKQLQRFLGILTYASDYIPNLAQMRQPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYRSGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWL 650
BLAST of CX675370 vs. ExPASy Swiss-Prot
Match: POL_COYMV (Putative polyprotein OS=Commelina yellow mottle virus PE=4 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12 Identity = 61/252 (24.21%), Postives = 113/252 (44.84%), Query Frame = 1 Query: 13 DQFVIVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWIDRVMFLGHIVTKEGISADPAKVEVIVNW--ERPSSVTEVRSFLGLAGYYRRFVKGFSSIAAPLTNLTKKNVKFNWDEACEKSFQELKSHLVTAPVLTLPSEGGSFVIYSDASRKGLGCV----LMQHG-----KVIAYASRQLKSHEQNYPTHDLELAAIVFAL-KIWRHYLYGETCEIFTDHKSLKYLFTQKELNLRQR-RWL 729 ++F+ V+IDDIL++S++ ++H HL +L+ +E L K + + FLG + I P + I ++ E+ ++ +RS+LG+ Y R +++ + PL + K +++K + P L LP + +I +D G G V + +H ++ AYAS + T D E+ A + L K +YL + I +D +++ + + N R RWL Sbjct: 1558 EKFIAVYIDDILVFSETAEQHSQHLYTMLQLCKENGLILSPTKMKIGTPEIDFLGASLGCTKIKLQPHIISKICDFSDEKLATPEGMRSWLGILSYARNYIQDIGKLVQPLRQKMAPTGDKRMNPETWKMVRQIKEKVKNLPDLQLPPKDSFIIIETDGCMTGWGAVCKWKMSKHDPRSTERICAYASGSFNPIKS---TIDAEIQAAIHGLDKFKIYYLDKKELIIRSDCEAIIKFYNKTNENKPSRVRWL 1806
BLAST of CX675370 vs. ExPASy Swiss-Prot
Match: POLG_PVCV2 (Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11 Identity = 59/259 (22.78%), Postives = 119/259 (45.95%), Query Frame = 1 Query: 25 IVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWIDRVMFLGHIVTKEGIS-ADPAKVEVIVNWERPSSVTEVRSFLGLAGYYRRFVKGFSSIAAPLTNLTKKNVKFNWDEACEKSFQELKSHLVTAPVLTLPSEGGSFVIYSDASRKGLGCVLMQH----GKVIAYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYGETCEIFTDHKSLKYLFTQKEL---NLRQRRWLELVKDFDCSINYHPGK 777 +V+IDDIL++S++ ++H L + +++ + KK +++ FLG S A +E+ + SV +++ FLG+ Y R F+ + +PL+++ KK W + + + ++LK L +PSEG ++ +DAS + VL++ K+ +AS + K EQ+Y + E+ A+ +K + +L + D ++ + N + RW + + + + GK Sbjct: 1539 LVYIDDILLFSETLEDHIKLLNQFISLVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFLGIVNYIRDFIPEVTEHISPLSDMLKKKPP-AWGKCQDNAVKQLKQLAQQVKSLHIPSEGKK-ILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFNFFLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKGK 1795
BLAST of CX675370 vs. ExPASy Swiss-Prot
Match: POLG_PVCV1 (Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11 Identity = 59/259 (22.78%), Postives = 119/259 (45.95%), Query Frame = 1 Query: 25 IVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWIDRVMFLGHIVTKEGIS-ADPAKVEVIVNWERPSSVTEVRSFLGLAGYYRRFVKGFSSIAAPLTNLTKKNVKFNWDEACEKSFQELKSHLVTAPVLTLPSEGGSFVIYSDASRKGLGCVLMQH----GKVIAYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYGETCEIFTDHKSLKYLFTQKEL---NLRQRRWLELVKDFDCSINYHPGK 777 +V+IDDIL++S++ ++H L + +++ + KK +++ FLG S A +E+ + SV +++ FLG+ Y R F+ + +PL+++ KK W + + + ++LK L +PSEG ++ +DAS + VL++ K+ +AS + K EQ+Y + E+ A+ +K + +L + D ++ + N + RW + + + + GK Sbjct: 1538 LVYIDDILLFSETLEDHIKLLNQFISLVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFLGIVNYIRDFIPEVTEHISPLSDMLKKKPP-AWGKCQDNAVKQLKQLAQQVKSLHIPSEGKK-ILQTDASDQYWSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFNFFLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKGK 1794 The following BLAST results are available for this feature:
BLAST of CX675370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675370 ID=CX675370; Name=CX675370; organism=Citrus sinensis; type=EST; length=872bpback to top |