CK937773

Overview
NameCK937773
Unique NameCK937773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: GPI14_EMENI (GPI mannosyltransferase 1 OS=Emericella nidulans GN=gpi14 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.344e-26
Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 3
Query:  264 LSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSII---HRSWGKFLFSASDLLVGVFIHSILKL-RKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            L+A  R +L+ YG WQD+H  V+YTD+DY+VF+DA+  ++ GDSPY R TYRY+PLLA+ L+P +       S+GK LF+ SD++ G  +   L L   +  +  +     WL NP    I TRG+ E ++  +++ ++  +L   +       G+ VHF+
Sbjct:   14 LAAGLRTVLLFYGAWQDAHSAVKYTDIDYMVFTDASRYVSQGDSPYARDTYRYTPLLAWMLLPTTWAIPGFFSFGKALFALSDVVAGWLVAKSLTLTHGMSAERALKYASFWLLNPMVANISTRGSSEGLLGVLVVALLWAVLNRRIYLGGVLLGIGVHFK 174          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: GPI14_ASPFU (GPI mannosyltransferase 1 OS=Aspergillus fumigatus GN=gpi14 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.464e-25
Identity = 61/161 (37.89%), Postives = 93/161 (57.76%), Query Frame = 3
Query:  267 SAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSII----HRSWGKFLFSASDLLVGVFIHSIL-KLRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            S   R +L+VYG WQD+H  ++YTD+DY VF+DAA  ++ G SPY R TYRY+PLLA+ L+P +        ++GK LF+ +D++ G  I  +L     +     +    VWL NP    I TRG+ E ++  +++ ++  +L   V  A    GL VHF+
Sbjct:   15 SIALRAVLLVYGAWQDAHSPIKYTDIDYFVFTDAARYVSRGASPYARDTYRYTPLLAWLLLPTTWDSIPGFFAFGKALFALADVVAGWLIAKVLVSAYGMSPSRALKYASVWLLNPMVANISTRGSSEGLLGVLVVGLLWAVLSRRVSLAGVILGLGVHFK 175          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: PIGM_TRYBB (GPI mannosyltransferase 1 OS=Trypanosoma brucei brucei GN=PIGM PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.717e-25
Identity = 62/167 (37.13%), Postives = 97/167 (58.08%), Query Frame = 3
Query:  237 SINIRSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNSIIHRSWGKFLFSASDLLVGVFIHSILK-LRKVPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            +++++ LL L A+ R+ILI Y  + D    V+YTD+DY++  D A  M +G SP+ RTT+RY+PLLA  ++P+  I    GK +F++SDL    + + +LK   K      M S+ + LFNP   ++ TRGN + +V  M L ++    +    QAA   G  VHF+
Sbjct:    9 TVSLQKLLLLGALLRLILIAYAFFHDQWFRVKYTDIDYMIVVDGARHMWNGGSPFDRTTFRYTPLLAALVMPSIWIANPMGKLIFASSDLGAAWYCYGVLKSFAKERSAKWMVSLFI-LFNPIVLSVSTRGNSDMLVTFMSLMVLSKFARRKCYQAAAVLGFAVHFK 174          
BLAST of CK937773 vs. ExPASy Swiss-Prot
Match: GPI14_NEUCR (GPI mannosyltransferase 1 OS=Neurospora crassa GN=gpi-14 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.719e-24
Identity = 69/235 (29.36%), Postives = 113/235 (48.09%), Query Frame = 3
Query:  174 AEPAPAFSNLPSVSLSQLAMISINIRSLLWLSAIFRVILIVYGEWQDSHMEVRYTDVDYLVFSDAASLMASGDSPYKRTTYRYSPLLAFFLIPNS-------------IIHRSW---GKFLFSASDLLVGVFIHSILKLRK--------------------------------VPEDLCMYSVVVWLFNPFTFTIGTRGNCEPIVCAMILWIIICLLKGNVLQAAFWYGLVVHFR 734
            A  +PA     S S S L+ +      L   + + R++L++YG WQD++  ++YTD+DYLVF+DAA  ++ G+SPY R TYRY+P+LA+ L+P +             +I+ +W   GK LF+A+DL+ G  I  +L + K                                +          +WL NP   TI TRG+ E ++  +++ ++  +L   +  A    G  VHF+
Sbjct:    2 ATTSPAAPRPKSKSSSLLSTLFSRPLPLYVSAFLLRIVLLLYGLWQDANSPLKYTDIDYLVFTDAARFVSRGESPYARETYRYTPILAWLLLPTTWTAGAQWGPWAAKVINVAWFSFGKVLFAAADLVAGWLIEQVLVMGKDFPSSAAKGKEKDTEKTKEGGKKGPSVTASTGMDPSRARAFAAIWLLNPMVATISTRGSSEGLLGVLVMALLWAVLSRRITLAGLLLGFSVHFK 236          
The following BLAST results are available for this feature:
BLAST of CK937773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
GPI14_EMENI5.344e-2637.27GPI mannosyltransferase 1 OS=Emericella nidulans G... [more]
GPI14_ASPFU3.464e-2537.89GPI mannosyltransferase 1 OS=Aspergillus fumigatus... [more]
PIGM_TRYBB7.717e-2537.13GPI mannosyltransferase 1 OS=Trypanosoma brucei br... [more]
GPI14_NEUCR1.719e-2429.36GPI mannosyltransferase 1 OS=Neurospora crassa GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_B02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937773 ID=CK937773; Name=CK937773; organism=Citrus sinensis; type=EST; length=814bp
GCGGGGAAACCTAATTCGTAACACTAACCGGTNNNCCACTCACGCTCTCA
CAAAAACAACTCAAACTCGTGAAAATTGCTACGTTGATATTGATATTGAA
ATCAATACAAGTCAGTTTCAGTTTTCTGATTATAAACCAAAATGGGTAAA
TGAAGAAATCCCATTTCTGTGATGCCGAGCCAGCTCCTGCTTTTTCAAAT
TTGCCGTCCGTCTCCCTGTCGCAGCTAGCAATGATATCAATAAATATCCG
TTCATTGCTCTGGCTCTCAGCCATTTTCCGTGTCATTCTCATTGTTTATG
GAGAATGGCAGGACTCCCATATGGAGGTTAGATATACAGATGTGGATTAT
CTTGTGTTTTCTGATGCTGCCTCCTTGATGGCCTCTGGAGACTCCCCGTA
CAAAAGAACTACATATCGATATTCACCGTTGCTAGCATTTTTTCTTATTC
CAAATTCAATTATTCATCGCTCGTGGGGAAAATTTCTTTTCTCAGCTTCA
GATTTACTTGTGGGTGTGTTTATTCATTCCATTTTGAAGCTACGGAAAGT
GCCTGAGGATCTATGCATGTATTCTGTAGTGGTGTGGCTCTTCAATCCAT
TTACCTTCACCATTGGGACCCGGGGGAACTGTGAGCCCATTGTTTGTGCC
ATGATTTTGTGGATCATTATCTGCCTTTTGAAGGGTAATGTGTTACAAGC
TGCATTTTGGTATGGACTTGTTGTCCATTTCAGAATTTACCCGATAATTT
ATGTGCTTCCTATTATCCTGATACTTGATCCACTTTTCTTCCGATCTGGT
TTGAAGCCCAGACT
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