FC921780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 8.011e-31 Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 M GACGYGNL+ +GYG TAALSTALFN+G CGACFE+QC +DP WC PGSI V+ATNFCP Sbjct: 49 MGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCP 110 HSP 2 Score: 43.5134 bits (101), Expect = 8.011e-31 Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP +HFDL++P F QIA Sbjct: 120 GGWCNPPLKHFDLAEPAFLQIA 141
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.609e-30 Identity = 47/65 (72.31%), Postives = 52/65 (80.00%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQC---VNDPRWCPPGSIFVTATNFCP 187 M GACGYGNLY +GYGTNTAALSTALFNNG+SCGACFE++C C PGS+ VTATNFCP Sbjct: 81 MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCP 145 HSP 2 Score: 47.3654 bits (111), Expect = 6.609e-30 Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP+ HFD+SQPVF++IA Sbjct: 155 GGWCNPPRAHFDMSQPVFQRIA 176
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.122e-29 Identity = 43/60 (71.67%), Postives = 53/60 (88.33%), Query Frame = 2 Query: 8 GACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 GACGYG+L+++GYG TAALSTALFN G +CGAC++I CVNDP+WC PGS+ +TATNFCP Sbjct: 67 GACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCP 126 HSP 2 Score: 41.2022 bits (95), Expect = 1.122e-29 Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 G WCNPPQ+HFDLS P+F +IA Sbjct: 134 GVWCNPPQKHFDLSLPMFLKIA 155
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.477e-29 Identity = 49/66 (74.24%), Postives = 53/66 (80.30%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDP--RWCPPG--SIFVTATNFCP 187 M GACGYGNLY +GYG N AALSTALFN+G SCGACFEI+CVN P WC PG SI +TATNFCP Sbjct: 53 MGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCP 118 HSP 2 Score: 41.5874 bits (96), Expect = 2.477e-29 Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP+ HFDL+ P+F IA Sbjct: 128 GGWCNPPRPHFDLAMPMFLHIA 149
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.478e-29 Identity = 48/63 (76.19%), Postives = 53/63 (84.13%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPG-SIFVTATNFCP 187 M GACGYGNLY +GYG TAALSTALF+ G+SCGACFE+ CVNDP+WC G SI VTATNFCP Sbjct: 55 MGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCP 117 HSP 2 Score: 40.4318 bits (93), Expect = 2.478e-29 Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GG C+PP HFDLSQP++E+IA Sbjct: 119 GGACDPPNHHFDLSQPIYEKIA 140
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 3.227e-29 Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 M GACGYGNLY GYGTNTAALST LFN+G +CG+C+E++C ND +WC PGS+ VTATN CP Sbjct: 46 MGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCP 107 HSP 2 Score: 41.5874 bits (96), Expect = 3.227e-29 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQI 278 GGWCNPP+ HFD+++P F QI Sbjct: 117 GGWCNPPRPHFDMAEPAFLQI 137
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 7.112e-29 Identity = 42/60 (70.00%), Postives = 53/60 (88.33%), Query Frame = 2 Query: 8 GACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 GACGYG+L+++GYG TAALSTALFN G +CGAC++I CV+DP+WC PG+I +TATNFCP Sbjct: 74 GACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCP 133 HSP 2 Score: 41.2022 bits (95), Expect = 7.112e-29 Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 G WCNPPQ+HFDLS P+F +IA Sbjct: 141 GVWCNPPQKHFDLSLPMFLKIA 162
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.244e-29 Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 8 GACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 GACGYG+L+++GYG TAALSTALFNNG CGAC+EI C + P+WC PGSI +TATNFCP Sbjct: 109 GACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCP 168 HSP 2 Score: 42.743 bits (99), Expect = 9.244e-29 Identity = 16/20 (80.00%), Postives = 19/20 (95.00%), Query Frame = 3 Query: 222 WCNPPQQHFDLSQPVFEQIA 281 WCNPPQ+HFDLSQP+F +IA Sbjct: 178 WCNPPQKHFDLSQPMFLKIA 197
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.569e-28 Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 2 Query: 8 GACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCPS 190 GACGYGNL+R+GYG TAALSTALFN+G +CGAC+EI C DP+WC PGS+ +TATNFCP+ Sbjct: 77 GACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPA 137 HSP 2 Score: 36.965 bits (84), Expect = 1.569e-28 Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 222 WCNPPQQHFDLSQPVFEQIA 281 WCNPPQ+HFDLS +F +IA Sbjct: 146 WCNPPQKHFDLSLAMFLKIA 165
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.570e-28 Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 2 Query: 8 GACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCPS 190 GACGYGNL+R+GYG TAALSTALFN+G +CGAC+EI C DP+WC PGS+ +TATNFCP+ Sbjct: 71 GACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPA 131 HSP 2 Score: 36.965 bits (84), Expect = 1.570e-28 Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 222 WCNPPQQHFDLSQPVFEQIA 281 WCNPPQ+HFDLS +F +IA Sbjct: 140 WCNPPQKHFDLSLAMFLKIA 159 The following BLAST results are available for this feature:
BLAST of FC921780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921780 ID=FC921780; Name=FC921780; organism=Citrus sinensis; type=EST; length=283bpback to top |