EL492661 | Citrus Genome Database

Overview


Name	EL492661
Unique Name	EL492661
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	281

Libraries


Library Name	Type
Citrus sinensis flesh cDNA-AFLP Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 3.312e-35
Identity = 71/85 (83.53%), Postives = 81/85 (95.29%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LLESHL+PS+++ ESKVFYLKMKGDY+RY AEFKTGAERK+AAE+T++AYK+AQDIALAELAPTHPIRL LALNFSVFYYEIL
Sbjct:  107 LKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEIL 191

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 4.325e-35
Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LL+SHL+PSA++AESKVFYLKMKGDYHRY AEFK+GAERKEAAE+TL+AYKSAQDIALA+L  THPIRL LALNFSVFYYEIL
Sbjct:  107 LKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEIL 191

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14333_SOLLC (14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.325e-35
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LL+S LIPSA+S +SKVFYLKMKGDYHRY AEFKTGAERKEAAESTL AYK+AQDIA AELAPTHPIRL LALNFSVFYYEIL
Sbjct:  108 LKLLDSKLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIASAELAPTHPIRLGLALNFSVFYYEIL 192

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 5.649e-35
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LL+S LIPSA+S +SKVFYLKMKGDYHRY AEFKTGAERKEAAESTL AYK+AQDIA AELAPTHPIRL LALNFSVFYYEIL
Sbjct:  107 LKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEIL 191

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.649e-35
Identity = 72/85 (84.71%), Postives = 79/85 (92.94%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LL+SHL+PSA++AESKVFYLKMKGDYHRY AEFK GAERKEAAE+TL+AYKSAQDIALA+L  THPIRL LALNFSVFYYEIL
Sbjct:  107 LKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEIL 191

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.378e-35
Identity = 71/85 (83.53%), Postives = 79/85 (92.94%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LL+SHL+PSA +AESKVFYLKMKGDYHRY AEFK+G ERK+AAEST+ AYK+AQDIALA+LAPTHPIRL LALNFSVFYYEIL
Sbjct:  111 LALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEIL 195

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.378e-35
Identity = 70/85 (82.35%), Postives = 81/85 (95.29%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LLE+HL+PS+++ ESKVFYLKMKGDY+RY AEFKTGAERK+AAE+T++AYK+AQDIALAELAPTHPIRL LALNFSVFYYEIL
Sbjct:  107 LKLLETHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEIL 191

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.259e-34
Identity = 71/85 (83.53%), Postives = 77/85 (90.59%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LL+ HLIP+AS+ ESKVFYLKMKGDYHRY AEFKTGA+RKEAAE TLLAYK+AQDIAL +L PTHPIRL LALNFSVFYYEIL
Sbjct:  104 LQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEIL 188

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.259e-34
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LL+S LIPSAS+ +SKVFYLKMKGDYHRY AEFKTGAERKEAAESTL AYK+AQDIA AELAPTHPIRL LALNFSVFYYEIL
Sbjct:  103 LKLLDSCLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEIL 187

[Close]

BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 1.259e-34
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 2

Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L LL+S+LIPSAS+ +SKVFYLKMKGDYHRY AEFKTGAERKEAAESTL AYK+AQDIA  ELAPTHPIRL LALNFSVFYYEIL
Sbjct:  102 LKLLDSNLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFYYEIL 186

The following BLAST results are available for this feature:

BLAST of EL492661 vs. ExPASy Swiss-Prot

BLAST of EL492661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141


Match Name	E-value	Identity	Description
14332_MAIZE	3.312e-35	83.53	14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE...	[more]
14336_ORYSJ	4.325e-35	84.71	14-3-3-like protein GF14-F OS=Oryza sativa subsp. ...	[more]
14333_SOLLC	4.325e-35	87.06	14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 P...	[more]
1433_OENEH	5.649e-35	87.06	14-3-3-like protein OS=Oenothera elata subsp. hook...	[more]
1433A_HORVU	5.649e-35	84.71	14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1	[more]
14334_ORYSJ	7.378e-35	83.53	14-3-3-like protein GF14-D OS=Oryza sativa subsp. ...	[more]
14331_MAIZE	7.378e-35	82.35	14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=...	[more]
1433_CHLRE	1.259e-34	83.53	14-3-3-like protein OS=Chlamydomonas reinhardtii P...	[more]
1433B_TOBAC	1.259e-34	87.06	14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV...	[more]
14332_SOLLC	1.259e-34	85.88	14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P...	[more]

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Properties


Property Name	Value
Genbank description	C5160 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC5160, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EL492661 ID=EL492661; Name=EL492661; organism=Citrus sinensis; type=EST; length=281bp
TCTTACCCTCCTTGAATCTCATCTCATTCCCTCTGCCTCATCGGCTGAGT
CTAAGGTGTTCTACCTGAAGATGAAGGGTGATTACCACAGGTATNTGGCT
GAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTTTGTT
GGCCTACAAGTCAGCTCAGGATATTGCTTTAGCTGAATTGGCCCCTACTC
ACCCNATAAGGCTGGNACTTGCACTCAACTTCTCTGTGTTCTACTATGAA
ATCCTTACTCAGGACTCATCATTTTGACTGC