EL492661

Overview
NameEL492661
Unique NameEL492661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length281
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.647e-26
Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L++++ HL+PS+++ ES VFY KMKGDY+RY AEFK G +RKEA+E +L AY++A   A ++LAPTHPIRL LALNFSVFYYEIL
Sbjct:  102 LSVIDEHLVPSSTTGESTVFYYKMKGDYYRYLAEFKAGDDRKEASEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEIL 186          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.152e-26
Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            + +++ HLIPSA++ ES VFY KMKGDY+RY AEFK+G E+KEAA+ ++ AY+SA   A A+L PTHPIRL LALNFSVFYYEIL
Sbjct:  104 MRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEIL 188          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.810e-26
Identity = 57/90 (63.33%), Postives = 71/90 (78.89%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEILTQDSS 271
            L++++ HLIPS+++ ES VF+ KMKGDY+RY AEF +GAERKEAA+ +L AYK+A   A   LAPTHP+RL LALNFSVFYYEIL    S
Sbjct:  102 LSVIDKHLIPSSNAVESTVFFYKMKGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNSPES 191          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 4.793e-26
Identity = 56/85 (65.88%), Postives = 68/85 (80.00%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            + +++ HLIPS S+ ES VFY KMKGDY+RY AEFK G ++KE AE +L AY++A   A AELAPTHPIRL LALNFSVFYYEI+
Sbjct:  104 MVVIDQHLIPSCSAGESTVFYHKMKGDYYRYLAEFKAGNDKKEVAELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFYYEIM 188          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 4.793e-26
Identity = 57/85 (67.06%), Postives = 69/85 (81.18%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            +++L+ HLIPSAS  ES VF+ KMKGDY+RY AEFK+G ERKEAA+ +L AY+ A   A A+L PTHPIRL LALNFSVFYYEI+
Sbjct:  104 MSVLDEHLIPSASEGESTVFFNKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIM 188          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.068e-25
Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            LT+++ HLIP A+S E+ VFY KMKGDY+RY AEFKT  ERKEAAE +L  Y++A   A  EL  THPIRL LALNFSVFYYEI+
Sbjct:  107 LTIIDQHLIPHATSGEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIM 191          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.395e-25
Identity = 56/85 (65.88%), Postives = 69/85 (81.18%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            +T+++ +LIPS+SS E  VF+ KMKGDY+RY AEFK+G ERKEAA+ ++ AY+ A   A AELA THPIRL LALNFSVFYYEIL
Sbjct:  104 MTVIDEYLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEIL 188          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.107e-25
Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            LTLL+  LIP A++AESKVFYLKMKGDY+RY AE  TG ER++  E +  AY  A DIA  ++ PTHPIRL LALNFSVFYYEIL
Sbjct:   67 LTLLDKFLIPKATTAESKVFYLKMKGDYYRYLAEVATGDERQKVIEESQRAYNDAFDIAKNQMQPTHPIRLGLALNFSVFYYEIL 151          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.107e-25
Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            L +++ HL+P A+S ES VFY KMKGDY RY AEFK+GA+R+EAA+ +L AY++A   A  EL+ THPIRL LALNFSVFYYEIL
Sbjct:  102 LAVIDKHLVPFATSGESTVFYYKMKGDYFRYLAEFKSGADREEAADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEIL 186          
BLAST of EL492661 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.181e-24
Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2
Query:    2 LTLLESHLIPSASSAESKVFYLKMKGDYHRYXAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLXLALNFSVFYYEIL 256
            +T+++ HLIPS ++ ES VFY KMKGDY+RY AEFKTG ++KE ++ +L AY++A   A AEL  THPIRL LALNFSVFYYEI+
Sbjct:  104 MTVIDEHLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIM 188          
The following BLAST results are available for this feature:
BLAST of EL492661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
14337_SOLLC1.647e-2664.7114-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
1433D_SOYBN2.152e-2665.8814-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
14310_ARATH2.810e-2663.3314-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]
14339_SOLLC4.793e-2665.8814-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
14339_ARATH4.793e-2667.0614-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
14312_ARATH1.068e-2565.8814-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
1433C_SOYBN1.395e-2565.8814-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
14332_SCHMA3.107e-2567.0614-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
14311_ARATH3.107e-2564.7114-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
14338_SOLLC1.181e-2462.3514-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC5160 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC5160, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492661 ID=EL492661; Name=EL492661; organism=Citrus sinensis; type=EST; length=281bp
TCTTACCCTCCTTGAATCTCATCTCATTCCCTCTGCCTCATCGGCTGAGT
CTAAGGTGTTCTACCTGAAGATGAAGGGTGATTACCACAGGTATNTGGCT
GAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTTTGTT
GGCCTACAAGTCAGCTCAGGATATTGCTTTAGCTGAATTGGCCCCTACTC
ACCCNATAAGGCTGGNACTTGCACTCAACTTCTCTGTGTTCTACTATGAA
ATCCTTACTCAGGACTCATCATTTTGACTGC
back to top