EL492653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS2_CRIGR (40S ribosomal protein S2 (Fragment) OS=Cricetulus griseus GN=RPS2 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.453e-32 Identity = 62/73 (84.93%), Postives = 70/73 (95.89%), Query Frame = -2 Query: 101 KCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 319 KCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L Sbjct: 82 KCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLL 154
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS2_BOVIN (40S ribosomal protein S2 OS=Bos taurus GN=RPS2 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 3.453e-32 Identity = 62/73 (84.93%), Postives = 70/73 (95.89%), Query Frame = -2 Query: 101 KCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 319 KCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L Sbjct: 142 KCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLL 214
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS2_DICDI (40S ribosomal protein S2 OS=Dictyostelium discoideum GN=rps2 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.923e-31 Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = -2 Query: 98 KCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 319 KC+KEVATAI GAI+ AKLSVIPVRRGYWGNK+G PHTVP KVTGKCGSV VR+VPAPRG GIVAARVPKK+LQ Sbjct: 129 KCAKEVATAISGAIVAAKLSVIPVRRGYWGNKLGAPHTVPTKVTGKCGSVAVRLVPAPRGTGIVAARVPKKLLQ 202
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS2_CAEEL (40S ribosomal protein S2 OS=Caenorhabditis elegans GN=rps-2 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.895e-30 Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = -2 Query: 101 KCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 319 KCSKEVATAIRGAI+ AKL+V+PVRRGYWGNKIG PHTVPCKVTGKC SV VR++PAPRG GIV+A VPKK+L Sbjct: 138 KCSKEVATAIRGAIVAAKLAVVPVRRGYWGNKIGLPHTVPCKVTGKCASVMVRLIPAPRGTGIVSAPVPKKLL 210
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS2_SCHPO (40S ribosomal protein S2 OS=Schizosaccharomyces pombe GN=rps2 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.961e-29 Identity = 62/92 (67.39%), Postives = 75/92 (81.52%), Query Frame = -2 Query: 44 KCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQS*LSIVRCFHILLRGSTK 319 KC+KEVATAIRGAII+ KLS++P+RRGYWG +G PHTVP KV+GKCGSVTVR+VPAPRGAG+VAA V K+ LQ L+ + + RGSTK Sbjct: 115 KCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQ--LAGIEDCYTQSRGSTK 204
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS2_LEIAM (40S ribosomal protein S2 OS=Leishmania amazonensis PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.451e-27 Identity = 53/75 (70.67%), Postives = 65/75 (86.67%), Query Frame = -2 Query: 98 SKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 322 ++ KEV+ AIR ++I AKL+++PVRRGYWGNKIG PHT+P KVTGKCGSV VR+VPAPRG GIVAA VPKK+L+ Sbjct: 127 ARVGKEVSLAIRASMIAAKLNIVPVRRGYWGNKIGEPHTIPMKVTGKCGSVAVRLVPAPRGTGIVAAPVPKKILE 201
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS2_YEAST (40S ribosomal protein S2 OS=Saccharomyces cerevisiae GN=RPS2 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 7.711e-24 Identity = 50/74 (67.57%), Postives = 62/74 (83.78%), Query Frame = -2 Query: 98 KCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 319 K +KEVA AIR II+AKLSVIP+RRGYWG +G+PH++ K TGKCGSVTVR++PAPRG+GIVA+ KK+LQ Sbjct: 116 KTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQ 189
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METKA (30S ribosomal protein S5P OS=Methanopyrus kandleri GN=rps5p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.543e-15 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = -2 Query: 98 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 313 ++EV AIR AI AKL++I VRRG W GRPH++P ++TGKCGSV + + PAPRG G+VA +KVL+ Sbjct: 93 AREVGPAIRAAIDRAKLNIIKVRRGCGSWECGCGRPHSIPFEITGKCGSVRITLKPAPRGTGLVAGETAQKVLE 166
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_THEPD (30S ribosomal protein S5P OS=Thermofilum pendens (strain Hrk 5) GN=rps5p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.998e-13 Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = -2 Query: 98 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 313 S+++ AI A AKL+++PVRRG W G PH++P KV GK GSV + ++PAP+G G+VA+ V K VL+ Sbjct: 88 SRQIGIAIEKATRRAKLNIVPVRRGCGSWECLCGEPHSIPFKVEGKAGSVKIELIPAPKGVGLVASDVAKTVLR 161
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METVS (30S ribosomal protein S5P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps5p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 40/73 (54.79%), Postives = 46/73 (63.01%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V K VL Sbjct: 99 SKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAPRGVGLVAGNVAKAVL 171 The following BLAST results are available for this feature:
BLAST of EL492653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492653 ID=EL492653; Name=EL492653; organism=Citrus sinensis; type=EST; length=335bpback to top |