EL492653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METVA (30S ribosomal protein S5P OS=Methanococcus vannielii GN=rps5p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 40/73 (54.79%), Postives = 46/73 (63.01%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V K VL Sbjct: 99 SKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAPRGVGLVAGNVAKAVL 171
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METMP (30S ribosomal protein S5P OS=Methanococcus maripaludis GN=rps5p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12 Identity = 40/73 (54.79%), Postives = 46/73 (63.01%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V K VL Sbjct: 99 SKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVL 171
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METM6 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps5p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12 Identity = 40/73 (54.79%), Postives = 46/73 (63.01%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V K VL Sbjct: 103 SKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVL 175
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METM5 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps5p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12 Identity = 40/73 (54.79%), Postives = 46/73 (63.01%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V K VL Sbjct: 103 SKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFAAKGACGSVKVELLPAPRGVGLVAGNVAKAVL 175
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_PYRFU (30S ribosomal protein S5P OS=Pyrococcus furiosus GN=rps5p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = -2 Query: 98 KEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 310 KEV AIR AI AKL++I ++RG W + RPH+VP V GK GSV VR++P PRG G+V V KK+L+ Sbjct: 104 KEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILR 176
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METMA (30S ribosomal protein S5P OS=Methanosarcina mazei GN=rps5p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 38/72 (52.78%), Postives = 47/72 (65.28%), Query Frame = -2 Query: 98 EVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 307 +V AIR AI AKL++ +RRG W G PHTVP +VTGK GSV+V ++PAPRG GI A KVL+ Sbjct: 92 QVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATKVLE 163
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METM7 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps5p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 40/73 (54.79%), Postives = 46/73 (63.01%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V K VL Sbjct: 103 SKEVGPAIRKAIAHAKLSLIKVRIGCGSWECGCGYPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVL 175
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METAC (30S ribosomal protein S5P OS=Methanosarcina acetivorans GN=rps5p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 38/72 (52.78%), Postives = 47/72 (65.28%), Query Frame = -2 Query: 98 EVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 307 +V AIR AI AKL++ +RRG W G PHTVP +VTGK GSV+V ++PAPRG GI A KVL+ Sbjct: 92 QVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATKVLE 163
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_PYRHO (30S ribosomal protein S5P OS=Pyrococcus horikoshii GN=rps5p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.969e-12 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = -2 Query: 98 KEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 310 +EV AIR AI AKL++I ++RG W + RPH+VP V GK GSV VR++P PRG G+V V KK+L+ Sbjct: 104 REVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILR 176
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_META3 (30S ribosomal protein S5P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps5p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12 Identity = 39/73 (53.42%), Postives = 45/73 (61.64%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 SKEV AIR AI AKLS+I VR G W G H++P G CGSV V ++PAPRG G+VA V K VL Sbjct: 96 SKEVGPAIRKAIAHAKLSLIKVRTGCGSWECGCGTAHSIPFAAKGSCGSVKVELLPAPRGVGLVAGNVAKAVL 168 The following BLAST results are available for this feature:
BLAST of EL492653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492653 ID=EL492653; Name=EL492653; organism=Citrus sinensis; type=EST; length=335bpback to top |