EL492653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_PYRAB (30S ribosomal protein S5P OS=Pyrococcus abyssi GN=rps5p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12 Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = -2 Query: 98 KEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 310 +EV AIR AI AKL++I ++RG W + RPH+VP V GK GSV V+++P PRG G+V V KK+L+ Sbjct: 104 REVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFTVEGKEGSVRVKLIPGPRGLGLVIGDVGKKILR 176
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METJA (30S ribosomal protein S5P OS=Methanocaldococcus jannaschii GN=rps5p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12 Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 +KEV AIR AI AK ++I V+RG W G PH++P K GKCGS + ++PAP+G G+VA V K VL Sbjct: 91 AKEVGPAIRKAIAQAKKNIIRVKRGCGSWECGCGTPHSIPYKGYGKCGSTAIEILPAPKGVGLVAGDVAKAVL 163
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METBF (30S ribosomal protein S5P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps5p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = -2 Query: 98 EVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 307 +V AIR AI AKL + + RG W G PHTVP +VTGK GSV+V ++PAPRG GI A KVL+ Sbjct: 92 QVGPAIRKAIDAAKLDITYIHRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATKVLE 163
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METTH (30S ribosomal protein S5P OS=Methanobacterium thermoautotrophicum GN=rps5p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = -2 Query: 98 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 313 ++EV AIR A+ AK ++I VRRG WG GR HTVP KV+GK GSV V ++PAP G G+ V K +++ Sbjct: 93 AREVGPAIRKAVDDAKFNIIKVRRGCGDWGCVCGREHTVPFKVSGKSGSVRVTLIPAPGGVGLAIGDVGKTIMR 166
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METLZ (30S ribosomal protein S5P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps5p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = -2 Query: 101 EVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 307 +V TAI+ AI AKL+++ VRRG W G H+VP +VTGK GSV V + PAP+G G+V V KKVL Sbjct: 93 QVGTAIKKAITNAKLNIVKVRRGCGSWECGCGMKHSVPMEVTGKAGSVAVTLKPAPKGIGLVTGDVGKKVL 163
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_PYRAR (30S ribosomal protein S5P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps5p PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.508e-11 Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = -2 Query: 32 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQS*LSIVRCFHILLRGSTKIYLS 313 +++V AI A+ AKL++IPVRRG W PH+VP V GK GSV V ++PAP+G G+VA V K VL+ L+ V+ RG T+ L+ Sbjct: 92 ARQVRQAIEKAVREAKLNLIPVRRGCGSWKCSCDEPHSVPFVVKGKSGSVEVTLIPAPKGVGLVAGDVAKAVLR--LAGVKDVWTHTRGDTRTTLN 185
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_THEVO (30S ribosomal protein S5P OS=Thermoplasma volcanium GN=rps5p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = -2 Query: 98 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 313 SKE A AIR A+I AKL+++ +RRG W GR HT+P V GK GSV + + PAPRG G+ V K +L+ Sbjct: 88 SKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVEGKSGSVRITLKPAPRGVGLAVGNVAKIILR 161
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_SULSO (30S ribosomal protein S5P OS=Sulfolobus solfataricus GN=rps5p PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 +K++ AI+ AI AK+++IPVRRG W G PH++P KV GK GSV V ++PAP+G G+V V K +L Sbjct: 96 AKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLL 168
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_SULIN (30S ribosomal protein S5P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps5p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 +K++ AI+ AI AK++++PVRRG W G PH++P KV GK GSV V ++PAP+G G+V V K +L Sbjct: 96 AKQLRVAIQKAIRDAKMNILPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVNLLPAPKGTGLVVGSVLKTLL 168
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METS3 (30S ribosomal protein S5P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps5p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 +KEV AIR A+ AK ++I VRRG WG G+ HTVP KV GK SV+V ++PAP G G+V V K +L Sbjct: 91 AKEVGPAIRKAVDNAKYNLIKVRRGCGDWGCVCGKEHTVPFKVQGKASSVSVSLMPAPAGVGLVVGDVGKTIL 163 The following BLAST results are available for this feature:
BLAST of EL492653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492653 ID=EL492653; Name=EL492653; organism=Citrus sinensis; type=EST; length=335bpback to top |