EL492653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_IGNH4 (30S ribosomal protein S5P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps5p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.573e-11 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = -2 Query: 98 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 313 +K++ AI+ A+ AKL++ PVRRG W G PH+VP V GK GSV V + PAPRG G+VA V K VL+ Sbjct: 93 AKQMRFAIQKALANAKLNITPVRRGCGSWECTCGEPHSVPFTVRGKSGSVEVILKPAPRGTGLVAGDVAKAVLR 166
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_PYRIL (30S ribosomal protein S5P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps5p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.360e-11 Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 32 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQS*LSIVRCFHILLRGSTKIYLS 313 +K+V AI A+ AKL++ PVRRG W PH+VP V GK GSV V ++PAP+G G+VA V K VL+ L+ ++ RG T+ L+ Sbjct: 92 AKQVRQAIEKAVREAKLNLTPVRRGCGSWKCSCDEPHSVPFVVRGKSGSVEVTLIPAPKGVGLVAGDVAKVVLR--LAGIKDVWTQTRGDTRTTLN 185
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_PYRCJ (30S ribosomal protein S5P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps5p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.360e-11 Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 32 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQS*LSIVRCFHILLRGSTKIYLS 313 S++V AI A AKL++ PVRRG W PH+VP V+GK GSV V ++PAP+G G+VA V K VL+ L+ ++ RG T+ L+ Sbjct: 92 SRQVRQAIEKATREAKLNITPVRRGCGSWKCSCDEPHSVPFVVSGKSGSVEVTLIPAPKGVGLVAGDVAKVVLR--LAGIKDVWTKTRGDTRTTLN 185
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_PYRKO (30S ribosomal protein S5P OS=Pyrococcus kodakaraensis GN=rps5p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.389e-11 Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = -2 Query: 101 KEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 310 +EV AIR AI AK+++I ++RG W + RPH++P V GK GSV V+++P PRG G+V V KK+L Sbjct: 103 REVGIAIRKAINYAKMNIIEIKRGCGSWECRCRRPHSIPFAVEGKEGSVRVKLMPGPRGLGLVIGDVGKKIL 174
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_HYPBU (30S ribosomal protein S5P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps5p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.389e-11 Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = -2 Query: 44 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQS*LSIVRCFHILLRGSTK 313 ++++A AI AI AKL++IPVRRG W PH+VP V GK GSV V + PAPRG G+VA K VL+ L+ +R +G T+ Sbjct: 96 ARQLAVAIEKAIRNAKLNIIPVRRGCGSWECLCSEPHSVPFTVRGKSGSVEVILKPAPRGTGLVAGDAAKVVLR--LAGIRDVWSFTKGDTR 185
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_THEAC (30S ribosomal protein S5P OS=Thermoplasma acidophilum GN=rps5p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.732e-11 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 SKE A AIR A+I AKL+++ +RRG W GR HT+P V GK GSV + + PAPRG G+ V + +L Sbjct: 88 SKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVQGKSGSVRITLKPAPRGVGLAVGDVARTIL 160
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METST (30S ribosomal protein S5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps5p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.732e-11 Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = -2 Query: 101 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVL 313 S+EV AIR A+ AK ++I VRRG WG GR HTVP K+ GK SV+ ++PAP G G+ V K +L Sbjct: 105 SQEVGPAIRKAVDAAKYNLIKVRRGCGDWGCGCGRRHTVPFKIEGKMSSVSATLIPAPAGVGLAIGNVGKTIL 177
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_PYRAE (30S ribosomal protein S5P OS=Pyrobaculum aerophilum GN=rps5p PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.486e-11 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 32 SKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQS*LSIVRCFHILLRGSTKIYLS 313 +++V AI A AKL+++PVRRG W PH+VP V GK GSV + ++PAP+G G+VA V K VL+ L+ ++ RG T+ L+ Sbjct: 108 ARQVRQAIEKATREAKLNLVPVRRGCGSWKCSCDEPHSVPFVVRGKSGSVEITLIPAPKGVGLVAGDVAKAVLR--LAGIKDVWTKTRGDTRTTLN 201
BLAST of EL492653 vs. ExPASy Swiss-Prot
Match: RS5_METBU (30S ribosomal protein S5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps5p PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.777e-11 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = -2 Query: 98 EVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 307 +V AIR AI AK+++ ++RG W G PHTVP +V GK GSVTV + PAPRG G+ A +KVL+ Sbjct: 94 QVGPAIRKAIDNAKINITRIKRGCGSWECGCGLPHTVPSEVNGKAGSVTVVLKPAPRGLGLAAGGTARKVLE 165 The following BLAST results are available for this feature:
BLAST of EL492653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492653 ID=EL492653; Name=EL492653; organism=Citrus sinensis; type=EST; length=335bpback to top |