CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.542e-41
Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D+  AG DTT  ++EWAMAEL+R+P                             YLQAVVKE+LRLHP  PL+LP KA  +V+I G+ +PKGA V VN WA+ RD   W NPL + PERFL  N+D KG +F ++PFG+GRR+CPG  L I ++  M+G L++ F+W L +    E+++M E  G+
Sbjct:  298 DMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGL 483          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.042e-41
Identity = 87/190 (45.79%), Postives = 118/190 (62.11%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGS----NLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            +LFVAGTDT+SST+EWA+AEL+R+P                             YL+A+VKET RLHP+ PL LPR A    EI G+ +PKG+ + +N WAI RD   W +PL F PERFL       +D +G +FE+IPFG+GRRIC G+ L IRM+ LM+ +LI++F+W L      E ++MEE +G+
Sbjct:  300 NLFVAGTDTSSSTVEWAIAELIRNPKILAQAQQEIDKVVGRDRLVGELDLAQLTYLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGL 489          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.031e-40
Identity = 79/184 (42.93%), Postives = 117/184 (63.59%), Query Frame = -1
Query:    7 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKF 465
            + F  G+DT S+ +EWA+A+L+++PD                            YLQA VKET+RL+P + +++P + +   ++ G+ +PKG  V VNA AIGRD   W++PL F PERFL S++++ G+ F+ IPFGSGRRICPG PLA+R++ L+L SL+++F W+L D    E +DMEE F
Sbjct:  286 ETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELF 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.758e-40
Identity = 82/183 (44.81%), Postives = 116/183 (63.39%), Query Frame = -1
Query:   13 QDLFVAGTDTTSSTLEWAMAELLRSPDA-----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL--EDENMDMEE 468
            QD+++AG DT++ T+ WAMAEL+++P                               YL+ VVKETLRLHPA PLLLPR+ ++ ++I G+ +P    + VN W+IGRD   W+NP  F PERF+   +D+KG +FE++PFGSGRRICPG+  AI  + L L +L+  FDW+L  ED+++DMEE
Sbjct:  296 QDIYLAGVDTSAITMIWAMAELVKNPRVMKKVQDEIRTCIGIKQNEKIEEDDVDKLQYLKLVVKETLRLHPAAPLLLPRETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPEEDKDLDMEE 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 2.296e-40
Identity = 84/182 (46.15%), Postives = 117/182 (64.29%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA-----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED--ENMDMEE 465
            +++ AG DT++ TL WAMAEL+R+P                               YL+ VVKETLRLHPA PLLLPR+ +AD++I G+ +P+   + VNAW+IGRD  +W+NP  F PERF+   +D+KG +FEL+PFGSGRRICPG+ +AI  + L L +L+  FDW + +  ++MDMEE
Sbjct:  301 NIYHAGIDTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGRIMEEDLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEE 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.999e-40
Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            D+F  GTDTT+ TLEWAMAEL++ PD                            YL+ ++KETLRLHP  PLL+PR++  DV I G+ +P   +VF+NAWAIGRD  +WEN   F+PERF+ +++DFKG++F+LIPFG+GRR CPG+   I  + + L +L+  F+W+L
Sbjct:  300 DMFSGGTDTTAVTLEWAMAELIKHPDVMEKAQQEVRRVVGKKAKVEEEDLHQLHYLKLIIKETLRLHPVAPLLVPRESTRDVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWEL 468          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.916e-40
Identity = 80/182 (43.96%), Postives = 111/182 (60.99%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEEKFGI 465
            ++F AGT+T+S+T++WAM E++++P                             YLQAV+KETLRLHP VPLLLPR+     +I G+ +P  ++V VNAWAIGRD   W  P  F P+RFL S +DFKG +FE +PFG GRRICPG+  A+  + L L  L+  FDW+   E ++M+E  G+
Sbjct:  293 NIFSAGTETSSTTVDWAMCEMIKNPTVMKKAQEEVRKVFNEEGNVDETKLHQLKYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQSNTEKLNMKESRGV 474          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.916e-40
Identity = 82/182 (45.05%), Postives = 115/182 (63.19%), Query Frame = -1
Query:   13 QDLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE--NMDMEE 468
            QD+F+AG DT++ T+ WAMAEL+ +P                              YL+ V+KETLRLHPA PLLLPR+ +AD++I G+ +P+   + V+AW++GRD   W+NP  F PERF+   +D+KG +FE +PFGSGRR CPG+  AI  + L L +L+  FDWKL +E  +M+MEE
Sbjct:  300 QDIFLAGIDTSAITMIWAMAELVNNPRVMKKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEE 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 8.725e-40
Identity = 80/183 (43.72%), Postives = 117/183 (63.93%), Query Frame = -1
Query:   13 QDLFVAGTDTTSSTLEWAMAELLRSPDA-----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL--EDENMDMEE 468
            Q++++AG DT++ T+ WAMAEL+++P                               YL+ V+KETLRLHP  PLLLPR+ +AD++I G+ +P+   + VNAW+IGR+   WENP  F PERF+   +D+KG +FE++PFGSGR+ICPG+   I  + L L +L+  FDW+L  ED+++DMEE
Sbjct:  299 QNIYLAGVDTSAITMIWAMAELVKNPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDKDIDMEE 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.944e-39
Identity = 79/186 (42.47%), Postives = 116/186 (62.37%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            D+ +AG DT+  T+ W M  L+++P                             YL+ VVKETLR++P VPLL PR+A  DV+I G+ +PK   + VN WAI R+   W++P +F+PERF+ + +D+KG NFEL+PFGSGRRICPG+ + + ++HL L +L+  FDWKL    E E++D+EE +G+
Sbjct:  293 DILLAGVDTSGHTITWVMTHLIKNPRVMKKAQAEVREVIKNKDNITEEDIEGLEYLKMVVKETLRINPLVPLLTPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGL 478          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C98A1_SORBI3.542e-4144.62Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
F3PH_PETHY6.042e-4145.79Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C80A1_BERST1.031e-4042.93Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71BO_ARATH1.758e-4044.81Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH2.296e-4046.15Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71A1_PERAE2.999e-4046.15Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71DC_CATRO3.916e-4043.96Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BP_ARATH3.916e-4045.05Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH8.725e-4043.72Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BD_ARATH1.944e-3942.47Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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