CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.926e-32
Identity = 75/184 (40.76%), Postives = 105/184 (57.07%), Query Frame = -1
Query:    4 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGS--NLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD-WKLEDENMDMEEKFG 465
            +L + GTD+T+ TL WA++ LLR+P A                           YLQA+VKETLRL+P  P   PR+   +  + G+ + KG ++  N W I RD   W +PL F PERFL +  ++D +G NFEL+PFGSGRR+C G+ L + M+H  L +L++SFD      E +DM E FG
Sbjct:  319 ELILGGTDSTAVTLTWALSLLLRNPLALGKAKEEIDMQIGKDEYIRESDISKLVYLQAIVKETLRLYPPAPFSSPREFTENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFG 502          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.142e-31
Identity = 70/186 (37.63%), Postives = 107/186 (57.53%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            D+F+AG++T+++T+ W MAE+++ P                             YL+A + E LRLHP  PL+  R+     EI G+ +P  + V VN +AIG D   W  P  F PERF+ S++D+KG NFE +PFG+GRRICPG+   +  + L+L  L+  FDW L    ++E++D+ E+FG+
Sbjct:  285 DIFIAGSETSATTINWTMAEMMKDPILLKKAQDEVREIFQRRGKVDETCIYELKYLKAFINEVLRLHPPGPLVF-RECRQACEINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGV 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 2.544e-31
Identity = 77/183 (42.08%), Postives = 103/183 (56.28%), Query Frame = -1
Query:    1 LFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL-GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDENMDMEEKFGI 462
            + +AGT+T++ TLEWAMA LLR+P+                            YLQ VV ET RL P  P L+PR    D++I G+ VP+   V VNAWAI RD   WE P  F P+R+  G   D+    ++L+PFG+GRR CPG  L  R++ L LGSLI  F+W+ ++ E MDM E  G+
Sbjct:  297 MMLAGTETSAVTLEWAMANLLRNPEVLEKARSEIDEKIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDY--YVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEMDMSESTGL 477          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.323e-31
Identity = 76/194 (39.18%), Postives = 103/194 (53.09%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLR-----------------------------SPDAYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLD----FKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD------MEEKFGI 465
            ++F A  +T+   LE AMAEL+                              S   YL+A +KE LRLHP  PLLLP  + AD +I G+ +P   +V VN WAIGRD   WE P  FMPERF+    D    + G++F  +PFGSGRRICPG    +  + +ML +L+  FDW++ +E  D      M+EKFG+
Sbjct:  326 NVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVRAYGAEKKLDMIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGL 519          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.403e-31
Identity = 74/186 (39.78%), Postives = 105/186 (56.45%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLS-FMPERFL-----GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE--NMDMEE 465
            +LF AG +T+++ LEWAM+ELLR P A                           YL  VVKETLRL+P++PL LP ++L  V + G+ +PK   V +N WAIGRD   W    S F PERF+     G +L     +F ++PFG+GRR CPG  +AI  +   L  L+++FDW++E +   +DM+E
Sbjct:  316 ELFSAGMETSANVLEWAMSELLRHPHAMKKLQQEIESVVGQQGTVKESDLASIVYLHCVVKETLRLYPSLPLALPHESLEAVTVGGYYIPKKTMVIMNLWAIGRDPSVWGADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDWRVEGDPSELDMKE 501          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.154e-30
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = -1
Query:   49 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGS--NLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 465
            +L + G+DTT+ TL WAM  LL+ P                             YL A++KETLRL+P  P   PR+   D  I G+ + KG ++  N W I RD   W +PL F PERFL +  ++D +G+NFEL+PFGSGRR+C G+ L + M+H +L + ++SF+
Sbjct:  336 ELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFE 503          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.185e-30
Identity = 74/181 (40.88%), Postives = 103/181 (56.91%), Query Frame = -1
Query:    4 LFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW-KLEDENMDMEEKFG 462
            + +AGT+T++ TLEWA++ LL  PD                            YL+ +V ETLRLHPA PLL+P  A  D +I  + +P+G  + VNAWAI RD  TW++P SF PERF     + +    +L+ FG GRR CPG  LA R++ L LGSLI  F+W ++ +  +DM+E  G
Sbjct:  303 MVIAGTNTSAVTLEWALSNLLNHPDVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERF-----EKEEEAQKLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVEVDMKEGVG 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.069e-29
Identity = 65/182 (35.71%), Postives = 100/182 (54.95%), Query Frame = -1
Query:   16 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDME 465
            D+F  GT+TTSS  EW M+EL+R+P+                             Y++ V+KET+RL+P +PLL+P       +I G+ V +G +V +N+WA+ R    W++   F PERF     D+KG  FE +PFG+GRR CPG    + +L L++  L+  FDW L    + +++DM+
Sbjct:  324 DMFTGGTETTSSAAEWVMSELMRNPEVMAKVQAEVRRVFDNKSPQDHEGLIDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSLPAGMQPDDVDMD 505          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.929e-29
Identity = 69/180 (38.33%), Postives = 99/180 (55.00%), Query Frame = -1
Query:    1 AGTDTTSSTLEWAMAELLRSPD--------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGS--NLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD-WKLEDENMDMEEKFGI 453
            AGT+ + ST+ WAM  +L++P                            YLQAVVKETLRL+   PL  PR+   D  + G+ V KG ++  N W I  D   W +P  F P+RFL +  ++D KG +F+L+PFGSGRR+CPG+   ++ +HL L S ++SF+      E +DM E FG+
Sbjct:  322 AGTEASISTIIWAMCLILKNPLILENKAELDIQVGKDRCICESDISNLVYLQAVVKETLRLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGV 501          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.050e-29
Identity = 68/192 (35.42%), Postives = 103/192 (53.65%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRS---------------PDA------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL----GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE------NMDMEEKFGI 465
            ++F A  +T+   LE++M+EL+ +               PD             YL+A +KE++R+HP  P LLP  +  D EI G+ +P G +V VNAWA+ RD   W+    F PERFL     + +D  G++   +PFG+GRRIC G   AI  + +ML +LI  FDW++  E       +DM ++FG+
Sbjct:  323 NMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGM 514          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C82A3_SOYBN3.926e-3240.76Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71DB_LOTJA1.142e-3137.63Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C81F1_ARATH2.544e-3142.08Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE3.323e-3139.18Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C75A1_PINTA7.403e-3139.78Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C82A1_PEA2.154e-3039.29Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C81D1_ARATH8.185e-3040.88Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C99A2_ORYSJ1.069e-2935.71Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C82A4_SOYBN6.929e-2938.33Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C71C1_MAIZE9.050e-2935.42Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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