CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.544e-28
Identity = 74/177 (41.81%), Postives = 98/177 (55.37%), Query Frame = -1
Query:   34 DLFVAGTDTTSSTLEWAMAELLRSP----------DA-----------------YLQAVVKETLRLHPAVPLLL-PRKALADVEIA-GFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL----GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED 465
            ++   GTDTT+   EW MAE++R+P          DA                 YLQAVVKETLR HP  PLL   R A ADV +A G +VP G    VN WAI  D   W +P +F PERF+    G+++D +G +  L PFG+GRR+CPG  L +  + L +  L+++FDW L D
Sbjct:  346 EMIFRGTDTTALVTEWCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPD 522          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.866e-28
Identity = 74/177 (41.81%), Postives = 95/177 (53.67%), Query Frame = -1
Query:   34 DLFVAGTDTTSSTLEWAMAELLRSP----------DA-----------------YLQAVVKETLRLHPAVPLL-LPRKALADVEIA-GFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL----GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED 465
            ++   GTDTT+   EW MAEL+R P          DA                 YLQAVVKETLR HP  PLL   R A ADV +  G +VP G    VN WAI  D   W +P +F PERFL    G+++D +G +  L PFG+GRR+CPG  L +  + L +  L+++F W L D
Sbjct:  341 EMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPD 517          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.661e-28
Identity = 71/179 (39.66%), Postives = 96/179 (53.63%), Query Frame = -1
Query:    7 AGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD-WKLEDENMDMEEKF 453
            AGT+ + +TL WA + +L +P                             YLQAVVKETLRL+P  PL  PR+   D  I G+ V KG ++  N   I  D   W NPL F PERFL    ++D KG++F+L+PFG GRRICPG+ L ++ + L L S ++SF+      E +DM E F
Sbjct:  318 AGTEASITTLIWATSLILNNPSVLEKLKAELDIQVGKERYICESDLSKLTYLQAVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPSTEPLDMTEVF 496          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.911e-27
Identity = 70/183 (38.25%), Postives = 103/183 (56.28%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNL----DFKGRN-FELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEE 465
            DLF AGT+ +++T++W MAE++++P                             YLQA+VKE LRLHP  P++  R      EI GF +P+  ++FVN +AI RD   WE+P  F PERFL S+     D K  +  + IPFGSGRR CPG  LA  ++  ++G ++  FDW ++ E ++M+E
Sbjct:  308 DLFSAGTEASANTIQWTMAEIIKNPKICERLREEIDSVVGKTRLVQETDLPNLPYLQAIVKEGLRLHPPGPVV--RTFKETCEIKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWIIKGEKINMKE 488          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.911e-27
Identity = 64/172 (37.21%), Postives = 97/172 (56.40%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  P+                            YL AVVKETLRL  A+PLL+P   L D ++ GF +P  +++ VNAW +  +   W+NP  F PERFL  G+ ++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.470e-27
Identity = 63/172 (36.63%), Postives = 98/172 (56.98%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  PD                            YLQAV+KETLRL  A+PLL+P   L D ++AG+ +P  +++ VNAW +  +   W++P  F PERFL   S ++  G +F  IPFG GRR CPG+ LA+ +L + +G ++ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHPDIQKKLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.106e-26
Identity = 70/181 (38.67%), Postives = 94/181 (51.93%), Query Frame = -1
Query:    4 LFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL-EDENMDMEEKFG 462
            + +AGTD+++ TLEW+M+ LL  P+                            YL+ V+ ETLRL+   PLLLP     +  I G+ VP+   V +NAWAI RD   W    +F PERF     + KG   +LI FG GRR CPG  LAIR + + L  LI  FDWKL   + +D+ E+ G
Sbjct:  299 MLLAGTDSSAVTLEWSMSNLLNHPEVLKKVKDELDTHVGQDRLVDESDLPKLTYLKNVINETLRLYTPAPLLLPHSTSDECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTFKPERF-----EKKGELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLINGDKIDLAERDG 474          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.887e-26
Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  P+                            YLQAV+KETLRL  A+PLL+P   L D ++ G+ +P  +++ VNAW +  +   W+ P  F PERFL   S+++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHPEIQKKVRDEIDRVLGPGHQVTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.465e-26
Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  P+                            YL AVVKETLRL  A+PLL+P   L D ++ GF +P  +++ VNAW +  +   W+NP  F PERFL   + ++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.465e-26
Identity = 62/172 (36.05%), Postives = 98/172 (56.98%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+ +P+                            YLQAV+KETLR   A+PLL+P   L D ++AG+ +P  +++ VNAW +  +   W  P  F PERFL   S ++  G +F+ IPFG GRR CPG+ LA+ +L +++G L+ +F+
Sbjct:  299 YIVENINVAAIETTLWSIEWGIAELVNNPEIQKKLRHELDTVLGAGVQICEPDVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFE 470          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C78AB_ORYSJ1.544e-2841.81Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C78A1_MAIZE5.866e-2841.81Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C82A2_SOYBN7.661e-2839.66Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
THAD_ARATH2.911e-2738.25Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPKI2.911e-2737.21Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_RUTGR8.470e-2736.63Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C81E1_GLYEC1.106e-2638.67Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
TCMO_GLYEC1.887e-2636.05Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_POPTM2.465e-2636.63Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_PETCR2.465e-2636.05Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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