CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.204e-26
Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EWA+AEL+  P+                            YLQAV+KETLRL  A+PLL+P   L D ++ G+ +P  +++ VNAW +  +   W+ P  F PERFL   S ++  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWAIAELVNHPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.204e-26
Identity = 64/172 (37.21%), Postives = 98/172 (56.98%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLR-----------------------SPDA----YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+                         PD     YLQAV+KETLRL  A+PLL+P   L D +++GF +P  +++ VNAW +  +   W+ P  F PERFL   S+++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  297 YIVENINVAAIETTLWSIEWGIAELVNHQKIQNKVREEIDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 468          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.204e-26
Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  P+                            YLQAVVKETLRL  A+PLL+P   L D ++AG+ +P  +++ VNAW +  +  +W+ P  F PERF    S+++  G +F  +PFG GRR CPG+ LA+ +L + +G ++ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHPEIQSKLRNELDTVLGPGVQVTEPDLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.490e-26
Identity = 65/184 (35.33%), Postives = 95/184 (51.63%), Query Frame = -1
Query:   10 DLFVAGTDTTSSTLEWAMAELLRSPD----------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSN--LDFKG-RNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDENMDMEEK 465
            +   AGTDTT++ L+W MA L++ P+                             YL+AVV E LR HP    LLP     D  + G+ VPK   +      IGRD + WE P++F PERF+G    +D  G R  +++PFG+GRRICPG+ LA+  L   + +++  F WK ++   +D+ EK
Sbjct:  302 EFLTAGTDTTATALQWIMANLVKYPEIQERLHEEIKSVVGEEAKEVEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHEVDLTEK 485          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.171e-26
Identity = 62/172 (36.05%), Postives = 96/172 (55.81%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  P+                            YLQAVVKETLRL  A+PLL+P   L D ++ G+ +P  +++ VNAW +  +   W+ P  F PERF    S+++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHPEIQQKVRDEIDRVLGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.171e-26
Identity = 68/185 (36.76%), Postives = 95/185 (51.35%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLL-PRKALADVEIA-GFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL----GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDEN-MDMEE 465
            ++   GTDTT+   EW MAEL+  P+A                           Y+QAVVKE LR+HP  PLL   R +  DV +  G  VP G    VN W+I  D   WE+P  F PERF+    G  +D +G +  L PFG+GRR+CPG  L +  ++L +  L++ F+W    E+ +D+ E
Sbjct:  342 EMIFRGTDTTALLTEWTMAELVLHPEAQKKAQAELDAVVGHDRSVKDSDIPKLPYIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPHAEHPVDLSE 526          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.365e-26
Identity = 62/172 (36.05%), Postives = 96/172 (55.81%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  P+                            YLQAVVKETLRL  A+PLL+P   L D ++ GF +P  +++ VNAW +  +   W+ P  F PERFL   + ++  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHPEIQAKLRHELDTKLGPGVQITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.223e-25
Identity = 61/172 (35.47%), Postives = 95/172 (55.23%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  P+                            YLQAV+KETLRL  A+PL LP   L D ++ G+ +P  +++ VNAW +  +   W+ P  F PERFL   S ++  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELETVLGPGVQITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.086e-25
Identity = 62/172 (36.05%), Postives = 95/172 (55.23%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+  P+                            YLQAVVKETLRL  A+PLL+P   L D ++ G+ +P  +++ VNAW +  +   W+ P  F PERF    S ++  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  299 YIVENINVAAIETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.086e-25
Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLR-----------------------SPDA----YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+                         PD     YLQAV+KETLRL  A+PLL+P   L D ++ GF +P  +++ VNAW +  +   W+ P  F PERFL   ++++  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+
Sbjct:  298 YIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
TCMO_ZINEL4.204e-2636.05Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_CICAR4.204e-2637.21Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_ARATH4.204e-2635.47Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C89A2_ARATH5.490e-2635.33Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_PHAAU7.171e-2636.05Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C78A4_PINRA7.171e-2636.76Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
TCMO_HELTU9.365e-2636.05Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_CATRO1.223e-2535.47Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_SOYBN2.086e-2536.05Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PEA2.086e-2536.05Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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