CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 3.559e-25
Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = -1
Query:    1 QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWE-NPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE-----DENMDMEEKFGI 468
            +D+F +GT TT+S LEW M EL+R P+                            YL  V+KE LRLHP+ PLL  R    DV++ G+ +  G  V +NAWA+ R+   W  +   + PER       F+  + + +PFG+GRR+CPG+  ++ +  L L +L+  F+W+L+     D+  D+ E  GI
Sbjct:  294 KDMFFSGTATTASQLEWTMTELMRHPECMKKLQDEINSFSTHNLNVTEKEVEKMNYLHCVIKEGLRLHPSGPLLF-RLPSEDVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGI 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.766e-24
Identity = 69/184 (37.50%), Postives = 92/184 (50.00%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLL-PRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFK--GRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE-NMDMEE 465
            ++   GTDT +  +EW +A +   P                             YL AVVKE LRLHP  PLL   R ++ D  I G+ VP G    VN WAI RD   W++PL FMPERF+  G + +F   G +  L PFGSGRR CPG  L    ++  + SL++ F+W   DE  +D+ E
Sbjct:  319 EMIFRGTDTVAVLIEWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTE 502          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.307e-24
Identity = 61/172 (35.47%), Postives = 95/172 (55.23%), Query Frame = -1
Query:   49 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFD 477
            +I +++ VA  +TT  ++EW +AEL+   D                            YLQAV+KETLRL  A+PLL+P   L D ++ GF +P  +++ VNAW +  +   W+ P  F PERFL   S+++  G +F  +PFG GRR CPG+ LA+ +L + +G L+ + +
Sbjct:  299 YIVENINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVE 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.766e-24
Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEEKFGI 465
            +L + GTDT++ T++W MAEL+ + +                            YLQ+VVKE LRLHP +PL++ R      E+ GF + +   + VNA+A+ RD  TWE+P  F PERFL    + + R  + I FGSGRR CPG  LA   +   +G+++  FD  ++ + + M+E  G+
Sbjct:  304 ELLLGGTDTSAQTIQWTMAELINNRNVLKRLREEIDSVVGETRLIQEKDLPKLPYLQSVVKEGLRLHPPLPLMV-RTFQRSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFL--RQEEERRALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSIKGDKVKMDEVGGL 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_PANTR (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan troglodytes GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.266e-22
Identity = 60/173 (34.68%), Postives = 86/173 (49.71%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S ++W +A LL +P                              L+A ++E LRL P  P+L+P KA  D  I  F V KG QV +N WA+  +E  W  P  FMPERFL  +       +   +PFG+G R C G  LA + L L++  L+  FD ++ D+
Sbjct:  298 DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTQVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.266e-22
Identity = 60/172 (34.88%), Postives = 89/172 (51.74%), Query Frame = -1
Query:   37 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLS--FMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE 465
            + F+ GT TT + ++WAM  ++R P++                           YL+AV+KE  RLHP  PL +PR+   DV             F+NAWAI RD   W  P +  F PER L   L+F+G++F  IPFGSGRR+CP +  A  ++ + L + +  F+W++E
Sbjct:  297 EFFLGGTTTTFTAIDWAMTLVVRHPESMKKLQEEIQTYSRNKLYVPEEEVENMKYLKAVIKEVFRLHPPGPLSIPRQLSEDV-------------FINAWAIHRDTEKW-GPYAEEFKPERHLDLPLNFQGQDFNFIPFGSGRRLCPDIDFATMLIEVGLANFVYRFNWRVE 454          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.653e-22
Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TTSS L W +A L+ +P+                             L+A ++E LR+ P  PLL+P KA  D  I  F +PK   V +N WA+  D+  W+ P  FMPERFL   GS+L     ++  +PFG+G R C G  LA + L + +  L+  FD+ + D+
Sbjct:  297 DIFGAGIETTSSVLNWILAFLVHNPEVKRKIQKEIDQYVGFSRTPSFNDRTHLLMLEATIREVLRIRPVAPLLIPHKANIDSSIGEFAIPKDTHVIINLWALHHDKNEWDQPDRFMPERFLDPTGSHLITPTPSY--LPFGAGPRSCIGEALARQELFIFMALLLQRFDFDVSDD 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_HUMAN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.820e-22
Identity = 59/173 (34.10%), Postives = 86/173 (49.71%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S ++W +A LL +P                              L+A ++E LRL P  P+L+P KA  D  I  F V KG +V +N WA+  +E  W  P  FMPERFL  +       +   +PFG+G R C G  LA + L L++  L+  FD ++ D+
Sbjct:  298 DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.683e-22
Identity = 55/180 (30.56%), Postives = 89/180 (49.44%), Query Frame = -1
Query:   16 QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG--SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDME 468
            ++L +A  D  S+ +EWAMAE++  P+                            Y++A+++E  RLHP     LP  AL+D  +AG+ +PKG+QV ++ + +GR+   W +PLSF PER L   S +     +   I F +G+R C    L   +  ++L  L+  F WKL +    +E
Sbjct:  332 KELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVE 511          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_RAT (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus norvegicus GN=Cyp17a1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 4.810e-22
Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT++ L+W +A L+ +P+                             L+A ++E LR+ P  P+L+P KA  D  I  F VPK   V VN WA+  DE  W+ P  FMPERFL   GS+L    +++  +PFG+G R C G  LA + L +    L+  FD  + D+
Sbjct:  297 DIFGAGIETTTTVLKWILAFLVHNPEVKKKIQKEIDQYVGFSRTPTFNDRSHLLMLEATIREVLRIRPVAPMLIPHKANVDSSIGEFTVPKDTHVVVNLWALHHDENEWDQPDQFMPERFLDPTGSHLITPTQSY--LPFGAGPRSCIGEALARQELFVFTALLLQRFDLDVSDD 469          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C71AR_ARATH3.559e-2533.86Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C78A3_SOYBN1.766e-2437.50Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
TCMO_MEDSA2.307e-2435.47Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C75AK_ARATH8.766e-2435.16Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
CP17A_PANTR1.266e-2234.68Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan tr... [more]
C71AS_ARATH1.266e-2234.88Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
CP17A_MOUSE1.653e-2234.86Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]
CP17A_HUMAN2.820e-2234.10Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo s... [more]
C79B1_SINAL3.683e-2230.56Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
CP17A_RAT4.810e-2234.86Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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