CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.810e-22
Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = -1
Query:   16 QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG--SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDME 468
            ++L +A  D  S+ +EWA+AE++  P+                            Y++A+++E  RLHP     LP  AL+D  +AG+ +PKG+QV ++ + +GR+   W +PLSF PER L   S +     +   I F +G+R C    L   +  +ML  L+  F WKL      +E
Sbjct:  333 KELVMAAPDNPSNAVEWAIAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVE 512          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_RANDY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22
Identity = 62/185 (33.51%), Postives = 92/185 (49.73%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLD-FKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE--DENMDMEEKFGI 465
            D+F AG +TTS+ L+WA+A LL  P+                            Y +A + E LR+ P  PLL+P  AL +  I  + +PK A+V +N W++  DE  W NP  F P+RFL  N +     +   +PFG+G R+C G  LA   + L L  ++  F  ++   D   D+E KFG+
Sbjct:  311 DIFGAGVETTSTVLKWAVAYLLHYPEVQKKIQEELDVKVGFGRYPLLSDRKILHYTEAAISEVLRIRPVSPLLIPHVALKESSIGEYTIPKEARVVINLWSLHHDEKEWVNPHLFSPDRFLDENGNRVYSPSPSFLPFGAGIRVCLGEALAKMEVFLFLSWILQRFTLEVPEGDPLPDLEGKFGV 495          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22
Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S L W +A LL +P+                             L+A ++E LR+ P  P+L+P +A +D+ I  F +PK   V +N WA+   E  W+ P  FMPERFL   GS+L     ++  +PFG+G R C G  LA + L L +  L+  FD  + D+
Sbjct:  298 DIFGAGIETTASVLSWIIAFLLHNPEVKKKIQKEIDQNIGFSRTPTFNDRNHLLMLEATIREVLRIRPVAPMLIPHRANSDMSIGEFSIPKFTPVIINLWALHHSEKEWDQPDRFMPERFLDPTGSHLITPSLSY--LPFGAGARSCIGEVLARQELFLFMAHLLQRFDLDVPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 6.282e-22
Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = -1
Query:   16 QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG--SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDME 468
            ++L +A  D  S+ +EWAMAE++  P+                            Y++A+++E  RLHP     LP  AL+D  +AG+ +PKG+QV ++ + +GR+   W +PL F PER L   S +     +   I F +G+R C    L   +  +ML  L+  F WKL +    +E
Sbjct:  331 KELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENETRVE 510          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_ORYLA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzias latipes GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.204e-22
Identity = 61/187 (32.62%), Postives = 92/187 (49.20%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENM--DMEEKFGI 465
            D+F AG +TT++ L+WA+  L+  P+                            +L+A ++E LR+ P  PLL+P  AL+D  +  F V KG +V +N W++  DE  W NP  F P RFL   GS+L     ++  +PFG+G R+C G  LA   L L L  ++  F   +        +E KFG+
Sbjct:  307 DIFGAGVETTTTVLKWAITYLIHYPEVQKQIQEELDRKVGVDRPPQLSDRGSLPFLEATIREVLRIRPVAPLLIPHVALSDTSLGDFTVRKGTRVVINLWSLHHDEKEWTNPDLFNPGRFLSADGSSLTLPSSSY--LPFGAGLRVCLGEALAKMELFLFLSWILQRFTLSVPPSQSLPSLEGKFGV 491          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_PAPHU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio hamadryas ursinus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.072e-21
Identity = 58/173 (33.53%), Postives = 85/173 (49.13%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S ++W +A LL +P                              L+A ++E LR+ P  P+L+P KA  D  I  F V KG  V +N WA+  +E  W  P  FMPERFL  +       +   +PFG+G R C G  LA + L L++  L+  FD ++ D+
Sbjct:  298 DIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEGIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_PAPCY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio cynocephalus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.072e-21
Identity = 58/173 (33.53%), Postives = 85/173 (49.13%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S ++W +A LL +P                              L+A ++E LR+ P  P+L+P KA  D  I  F V KG  V +N WA+  +E  W  P  FMPERFL  +       +   +PFG+G R C G  LA + L L++  L+  FD ++ D+
Sbjct:  298 DIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_MACMU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca mulatta GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.072e-21
Identity = 58/173 (33.53%), Postives = 85/173 (49.13%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S ++W +A LL +P                              L+A ++E LR+ P  P+L+P KA  D  I  F V KG  V +N WA+  +E  W  P  FMPERFL  +       +   +PFG+G R C G  LA + L L++  L+  FD ++ D+
Sbjct:  298 DIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_MACFA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca fascicularis GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.072e-21
Identity = 58/173 (33.53%), Postives = 85/173 (49.13%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S ++W +A LL +P                              L+A ++E LR+ P  P+L+P KA  D  I  F V KG  V +N WA+  +E  W  P  FMPERFL  +       +   +PFG+G R C G  LA + L L++  L+  FD ++ D+
Sbjct:  298 DIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_FELCA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis catus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.072e-21
Identity = 58/173 (33.53%), Postives = 83/173 (47.98%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDAY---------------------------LQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S + W +A LL  P  Y                           L+A ++E LR+ P  P L+P KA+ D  I  F V KG  V +N WA+  +E  W  P  FMPERFL  +       +   +PFG+G R C G  LA + + L +  L+  FD ++ D+
Sbjct:  298 DIFGAGVETTTSVVRWTVAFLLHHPQLYKKLQEEIDQNIGFSRTPTMSDRNQLILLEATIREVLRIRPVAPTLIPHKAIMDSSIGEFAVDKGTNVIINLWALHHNEKEWYRPDQFMPERFLDPTRSQLISPSLSYLPFGAGPRSCLGESLARQEVFLFMAWLLQRFDLEVPDD 470          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C79B3_ARATH4.810e-2230.56Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
CP17A_RANDY6.282e-2233.51Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana d... [more]
CP17A_MESAU6.282e-2234.29Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocr... [more]
C79B2_ARATH6.282e-2230.56Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
CP17A_ORYLA8.204e-2232.62Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzia... [more]
CP17A_PAPHU1.072e-2133.53Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP17A_PAPCY1.072e-2133.53Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP17A_MACMU1.072e-2133.53Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_MACFA1.072e-2133.53Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_FELCA1.072e-2133.53Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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