CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C508C_DICDI (Probable cytochrome P450 508C1 OS=Dictyostelium discoideum GN=cyp508c1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.072e-21
Identity = 64/188 (34.04%), Postives = 95/188 (50.53%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSP-----------------------------------DAYLQAVVKETLRLHPAVPLLLPRKALADVEIA--GFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEE 465
            D+F+AGTDTT++TLEW + +L  SP                                     Y+QA++KET+R+HP V   LPR    D+ I    + +PKG +VF+N  +IG +E  +++P  F P RFL ++ +     F   PFG G R+C G  LA   L+L++ +LI  +  K  DEN   E+
Sbjct:  292 DMFMAGTDTTANTLEWIIIKLCNSPIHQEIAYNELKKVVSSKVIIDDSIKREITLSDRPNTPYIQAIIKETMRMHPVVVFGLPRYCENDIFIGDENYFIPKGCKVFINFHSIGYNEKYFKDPYKFEPNRFLENSNNSMDSFF---PFGLGNRVCLGRQLANDQLYLVIANLILKYKLKTIDENKINED 476          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.399e-21
Identity = 62/189 (32.80%), Postives = 93/189 (49.21%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNF-----ELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDEN--MDMEEKFGI 465
            D+F AG +TT++ L+WA+  LL  P+                            YL+A + E LR+ P  PLL+P  +LAD  I  + +PKGA+V +N W++  DE  W+ P  F P RF    LD +G++        +PFG+G R+C G  LA   L L L  ++  F  +   +     +E KFG+
Sbjct:  301 DIFGAGVETTTTVLKWAVLYLLHYPEVQKKIQEEMDQKIGLARHPHLSDRPLLPYLEATISEGLRIRPVSPLLIPHVSLADTSIGEYSIPKGARVVINLWSVHHDEKEWDKPEEFNPGRF----LDEQGQHIHSPSPSYLPFGAGIRVCLGEVLAKMELFLFLAWVLQRFTLECPQDQPLPSLEGKFGV 485          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2U1_MOUSE (Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.828e-21
Identity = 63/188 (33.51%), Postives = 87/188 (46.28%), Query Frame = -1
Query:    1 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED--ENMDMEEKFGI 477
            +I  DLF+AGTDTT+++L W +  +  +PD                            Y +A + E  RL   VPL +P        + GF +PKG  V +N W++ RD   WE P  F P RFL        R    IPFG G+R+C G  LA   L LM  SL+ +F + L +  E   M  +FG+
Sbjct:  330 YIIGDLFIAGTDTTTNSLLWCLLYMSLNPDVQKKVHEEIERVIGCDRAPSLTDKAQMPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGFTIPKGTVVLINLWSVHRDPAIWEKPDDFCPHRFLDDQGQLLKRE-TFIPFGIGKRVCMGEQLAKMELFLMFVSLMQTFTFALPEGSEKPVMTGRFGL 516          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.828e-21
Identity = 58/164 (35.37%), Postives = 80/164 (48.78%), Query Frame = -1
Query:   46 GTDTTSSTLEWAMAELLRSPDA--------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSNLDFKG-RNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW 450
            GTDTT++ +EW +A+L+ +P+                           YL AVVKE LR HP    +L         + G+ +P  A V V   AI  D   W NP  F PERF+  G   D  G    +++PFG GRRICPGL +A   +HLM+  ++  F+W
Sbjct:  311 GTDTTATAVEWGIAQLIANPNVQTKLYEEIKRTVGEKKVDEKDVEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPIDANVEVYTPAIAEDPKNWLNPEKFDPERFISGGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEW 474          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_PERLE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromyscus leucopus GN=Cyp17a1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.387e-21
Identity = 61/174 (35.06%), Postives = 87/174 (50.00%), Query Frame = -1
Query:   34 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED 465
            D F AG +TT+S L W +A LL +P+                             L+A ++E LR+ P  P+L+P KA  D  I  F +PK   V +N WA+  +E  W+ P  FMPERFL   GS+L     ++  +PFG+G R C G  LA ++L L +  L+  FD  + D
Sbjct:  296 DFFGAGIETTTSVLCWIVAFLLHNPEVKKKIQKEIDQNIGFSRTPTFNDRNHLLMLEATIREVLRIRPVAPMLIPHKANIDSSIGEFTIPKDTHVVINLWALHHNEKEWDQPDRFMPERFLDATGSHLITPSLSY--LPFGAGPRACIGEVLARQVLFLYVACLLQRFDLDVPD 467          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_SHEEP (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ovis aries GN=CYP17A1 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.118e-21
Identity = 56/173 (32.37%), Postives = 84/173 (48.55%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S ++W +A LL  P                              L+A ++E LR+ P  P+L+P KA+ D  I    + KG  V VN WA+  +E  W+ P  FMPERFL  +       +   +PFG+G R C G  LA + L L +  L+  F+ ++ D+
Sbjct:  298 DIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDSIDQNIGFNRTPTISDRNRLVLLEATIREVLRIRPVAPMLIPHKAIIDSSIGDLTIDKGTDVVVNLWALHHNEKEWQQPDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFMSRLLQRFNLEIPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_CAPHI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra hircus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.118e-21
Identity = 56/173 (32.37%), Postives = 84/173 (48.55%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG-SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F AG +TT+S ++W +A LL  P                              L+A ++E LR+ P  P+L+P KA+ D  I    + KG  V VN WA+  +E  W+ P  FMPERFL  +       +   +PFG+G R C G  LA + L L +  L+  F+ ++ D+
Sbjct:  298 DIFGAGVETTTSVIKWIVAYLLHHPSLKKRIQDSIDQNIGFNRTPTISDRNCLVLLEATIREVLRIRPVAPMLIPHKAIIDSSIGDLTIDKGTDVVVNLWALHHNEKEWQQPDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFMSRLLQRFNLEIPDD 470          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.118e-21
Identity = 53/169 (31.36%), Postives = 79/169 (46.75%), Query Frame = -1
Query:   46 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSN--LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW 465
            +L +A  D  S+  EW MAE++  P                             Y++A VKE  RLHP  P  LP  +  D  + G+ +PKG+ V ++   IGR+   W+ P  F PER L +N  +D    +  +I F +GRR C G+ +   M +++L  LI  F W
Sbjct:  322 ELMLATVDNPSNAAEWGMAEMINEPSIMQKAVEEIDRVVGKDRLVIESDLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTW 490          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_ONCMY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorhynchus mykiss GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21
Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDEN--MDMEEKFGI 465
            D+F AG +TTS+ L+WA+A L+  P                             YL+A ++E LR+ P  PLL+P  A  D  I  F V KGA++ +N W++  DE  W+NP  F P RFL   G+ L     ++  +PFG+G R+C G  LA   + L L  ++      +        +E KFG+
Sbjct:  305 DIFGAGVETTSTVLKWAIAYLIHHPQVQQRIQEELDSVVGGDRTPQLSDRGSLPYLEATIREVLRIRPVAPLLIPHVAQTDTSIGKFTVRKGARIIINLWSLHHDEKEWKNPEMFDPGRFLNEEGTGLCIPSPSY--LPFGAGVRVCLGEALAKMEIFLFLSWILQRLTMTVSPGQPLPSLEGKFGV 489          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.071e-21
Identity = 58/168 (34.52%), Postives = 86/168 (51.19%), Query Frame = -1
Query:   52 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSF 465
            D+F AG +TT++ L+W++  L+  P                             YL+A ++E LR+ P  PLL+P  AL+D  I  + V KG +V VN W++  DE  W+NP  F PERFL   G++L     ++  +PFG+G R+C G  LA   L L L  ++  F
Sbjct:  301 DIFGAGVETTTTVLKWSILYLIHHPQVQRKIQEELDAKIGRDRHPQVNDRGNLPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERFLNEEGNSLCCPSLSY--LPFGAGVRVCLGEALAKLELFLFLSWILQRF 466          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C508C_DICDI1.072e-2134.04Probable cytochrome P450 508C1 OS=Dictyostelium di... [more]
CP17A_CHICK1.399e-2132.80Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]
CP2U1_MOUSE1.828e-2133.51Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2... [more]
C77A3_SOYBN1.828e-2135.37Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
CP17A_PERLE2.387e-2135.06Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromy... [more]
CP17A_SHEEP3.118e-2132.37Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ovis a... [more]
CP17A_CAPHI3.118e-2132.37Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra ... [more]
C79A2_ARATH3.118e-2131.36Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
CP17A_ONCMY5.318e-2132.62Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorh... [more]
CP17A_ICTPU9.071e-2134.52Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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