CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP21A_PIG (Steroid 21-hydroxylase OS=Sus scrofa GN=CYP21 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19
Identity = 58/168 (34.52%), Postives = 76/168 (45.24%), Query Frame = -1
Query:   52 DLFVAGTDTTSSTLEWAMAELLRSPDAY------------------------------LQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSF 465
            DLF+ GT+TT++TL WA+  LL  P+                                L A + E LRL P VPL LP +A     I G+ +P+G  V  N      DE  WE P  F P+RFL       G N   + FG G R+C G PLA   L ++L  L+ +F
Sbjct:  286 DLFIGGTETTANTLSWAVVYLLHHPEIQWRLQEELDRELGPGAAGSRVPYKDRARLPLLNATIAEVLRLRPVVPLALPHRATRPSSIFGYDIPEGTVVIPNLQGAHLDETVWEQPHEFRPDRFLA-----PGANPSALAFGCGARVCLGEPLARLELFVVLVQLLQAF 448          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2DK_MESAU (Cytochrome P450 2D20 OS=Mesocricetus auratus GN=CYP2D20 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19
Identity = 56/169 (33.14%), Postives = 78/169 (46.15%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            DLF+AG  TTS+TL WA+  ++  PD                            Y  AV+ E  R     P+ +P     DVE+ GF++PKG  +  N  ++ +DE  WE PL F PE FL +   F  +    +PF +GRR C G PLA   L L    L+  F + +
Sbjct:  304 DLFIAGMVTTSTTLSWALLLMILHPDVQSRVQQEIDDVIGQVRRPEMADQARMPYTNAVIHEVQRFGDIAPVNVPHMTSRDVEVQGFLIPKGTTLIPNLSSVLKDETVWEKPLHFHPEHFLDAQGRFV-KQEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSV 471          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2DR_MESAU (Cytochrome P450 2D27 OS=Mesocricetus auratus GN=CYP2D27 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.501e-19
Identity = 55/169 (32.54%), Postives = 79/169 (46.75%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            D+F+AG  TTS+TL WA+  ++  PD                            Y  AV+ E  R     P+ +P     DVE+ GF++PKG  +  N  ++ +DE  WE PL F PE FL +   F  ++   +PF +GRR C G PLA   L L    L+  F + +
Sbjct:  304 DMFIAGMVTTSTTLSWALLLMILHPDVQSRVQQEIDDVIGQVRRPEMADQARMPYTNAVIHEVQRFGDIAPVNIPHMTSHDVEVQGFLIPKGTTLIPNLSSVLKDETVWEKPLHFHPEHFLDAQGRFV-KHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSV 471          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2DE_BOVIN (Cytochrome P450 2D14 OS=Bos taurus GN=CYP2D14 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 8.490e-19
Identity = 59/169 (34.91%), Postives = 77/169 (45.56%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            DLF AG  TTS+TL WA+  ++  PD                            +  AVV E  R    VPL LP     D+E+ GF +PKG  +  N  ++ +DE  WE P  F PE FL +   F  +    IPF +GRR C G PLA   L L   SL+  F + +
Sbjct:  304 DLFSAGMVTTSTTLAWALLLMILHPDVQRRVQQEIDEVIGQVRRPEMGDQALMPFTVAVVHEVQRFADIVPLGLPHMTSRDIEVQGFHIPKGTTLITNLSSVLKDETVWEKPFRFHPEHFLDAQGRFV-KQEAFIPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 471          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.109e-18
Identity = 53/181 (29.28%), Postives = 81/181 (44.75%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA--------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEEKFGI 465
            +  +   DTT  T EWA+ EL + P                            YL  V  ETLR +   PL+  R A  D +I G+ VP G+++ +N +    D+  WE P  + PERFL           + + FG+G+R+C G   A  M  + +G L+  F+WKL D   +  + +G+
Sbjct:  312 ETIIETADTTLVTTEWAIYELAKHPSVQDRLCKEIQNVCGGEKFKEEQLSQVPYLNGVFHETLRKYSPAPLVPIRYAHEDTQIGGYHVPAGSEIAINIYGCNMDKKRWERPEDWWPERFLDDGKYETSDLHKTMAFGAGKRVCAGALQASLMAGIAIGRLVQEFEWKLRDGEEENVDTYGL 492          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2DG_CAVPO (Cytochrome P450 2D16 OS=Cavia porcellus GN=CYP2D16 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.109e-18
Identity = 57/171 (33.33%), Postives = 78/171 (45.61%), Query Frame = -1
Query:   34 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED 465
            DLF AG  TTS TL WA+  ++  PD                            +  AV+ E  R    VP+ +P     D E+ GF++PKG  +F N  ++ +DE  WE PL F P  FL +   F  R    +PF +G RIC G PLA   L L   SL+  F + + +
Sbjct:  304 DLFGAGMVTTSVTLSWALLLMILHPDVQRHVQEEIDEVIGQVRCPEMADQAHMPFTNAVIHEVQRFADIVPMGVPHMTSRDTEVQGFLIPKGTMLFTNLSSVLKDETVWEKPLHFHPGHFLDAEGRFVKRE-AFMPFSAGPRICLGEPLARMELFLFFTSLLQRFSFSVPE 473          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2D1_RAT (Cytochrome P450 2D1 OS=Rattus norvegicus GN=Cyp2d1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.109e-18
Identity = 55/169 (32.54%), Postives = 79/169 (46.75%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            DLF AG  TT++TL WA+  ++  PD                            Y  AV+ E  R     PL LPR    D+E+  F++PKG  + +N  ++ +DE  WE P  F PE FL +  +F  ++   +PF +GRR C G PLA   L L    L+  F + +
Sbjct:  304 DLFTAGMVTTATTLTWALLLMILYPDVQRRVQQEIDEVIGQVRCPEMTDQAHMPYTNAVIHEVQRFGDIAPLNLPRFTSCDIEVQDFVIPKGTTLIINLSSVLKDETVWEKPHRFHPEHFLDAQGNFV-KHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSV 471          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2J3_RAT (Cytochrome P450 2J3 OS=Rattus norvegicus GN=Cyp2j3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18
Identity = 58/168 (34.52%), Postives = 78/168 (46.43%), Query Frame = -1
Query:   43 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK 465
            DLF AGT+TTS+TL WA+  +   P+                            Y  AV+ E  R+   +P  +PR+   D  +AGF +PKG  +  N  A+ RD   W  P +F PE FL  N  FK R    +PF  G+R C G  LA   L + + SLI  F +K
Sbjct:  307 DLFFAGTETTSTTLRWALLCMALYPEVQEKMQAEIDRVIGQGRQPNLADRDSMPYTNAVIHEVQRIGNIIPFNVPREVAVDTYLAGFNLPKGTMILTNLTALHRDPKEWATPDTFNPEHFL-ENGQFKKRE-SFLPFSMGKRACLGEQLARSELFIFITSLIQKFTFK 472          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP21A_LYNLY (Steroid 21-hydroxylase OS=Lynx lynx GN=CYP21 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18
Identity = 56/168 (33.33%), Postives = 78/168 (46.43%), Query Frame = -1
Query:   52 DLFVAGTDTTSSTLEWAMAELLRSPDAY------------------------------LQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSF 465
            DLF+ GT+TT++TL WA+A LL  P+                                L A + E LRL P VPL LP +      I G+ +P+G  V  N      D+  WE P  F P+RFL       G +  ++ FG G R+C G PLA   L ++L  L+++F
Sbjct:  285 DLFIGGTETTATTLSWAVAFLLHHPEIQQRLQEELDCELGPGASGSRVPLKDPSRLPLLTATIAEVLRLRPVVPLALPHRTTRHSSILGYDIPEGTVVIPNLQGAHLDDTVWEQPHEFRPDRFL-----VPGASPRVLAFGCGARVCLGEPLARLELFVVLARLLHAF 447          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP21A_FELCA (Steroid 21-hydroxylase OS=Felis catus GN=CYP21 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18
Identity = 56/168 (33.33%), Postives = 78/168 (46.43%), Query Frame = -1
Query:   52 DLFVAGTDTTSSTLEWAMAELLRSPDAY------------------------------LQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSF 465
            DLF+ GT+TT++TL WA+A LL  P+                                L A + E LRL P VPL LP +      I G+ +P+G  V  N      D+  WE P  F P+RFL       G +  ++ FG G R+C G PLA   L ++L  L+++F
Sbjct:  285 DLFIGGTETTATTLSWAVAFLLHHPEIQQRLQEELDCELGPGASGSRVPLKDPSRLPLLTATIAEVLRLRPVVPLALPHRTTRHSSILGYDIPEGTVVIPNLQGAHLDDTVWEQPHEFRPDRFL-----VPGASPRVLAFGCGARVCLGEPLARLELFVVLARLLHAF 447          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
CP21A_PIG3.811e-1934.52Steroid 21-hydroxylase OS=Sus scrofa GN=CYP21 PE=1... [more]
CP2DK_MESAU4.977e-1933.14Cytochrome P450 2D20 OS=Mesocricetus auratus GN=CY... [more]
CP2DR_MESAU6.501e-1932.54Cytochrome P450 2D27 OS=Mesocricetus auratus GN=CY... [more]
CP2DE_BOVIN8.490e-1934.91Cytochrome P450 2D14 OS=Bos taurus GN=CYP2D14 PE=2... [more]
KO1_ARATH1.109e-1829.28Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
CP2DG_CAVPO1.109e-1833.33Cytochrome P450 2D16 OS=Cavia porcellus GN=CYP2D16... [more]
CP2D1_RAT1.109e-1832.54Cytochrome P450 2D1 OS=Rattus norvegicus GN=Cyp2d1... [more]
CP2J3_RAT1.448e-1834.52Cytochrome P450 2J3 OS=Rattus norvegicus GN=Cyp2j3... [more]
CP21A_LYNLY1.448e-1833.33Steroid 21-hydroxylase OS=Lynx lynx GN=CYP21 PE=3 ... [more]
CP21A_FELCA1.448e-1833.33Steroid 21-hydroxylase OS=Felis catus GN=CYP21 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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