CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP21A_CANLU (Steroid 21-hydroxylase OS=Canis lupus GN=CYP21 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18
Identity = 58/168 (34.52%), Postives = 77/168 (45.83%), Query Frame = -1
Query:   52 DLFVAGTDTTSSTLEWAMAELLRSPDAY------------------------------LQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSF 465
            DLF+ GT+TT++TL WA+A LL  P+                                L A V E LRL P VPL LP        I+G+ +P+G  V  N      DE  WE P  F P+RFL       G +  ++ FG G R+C G PLA   L ++L  L+ +F
Sbjct:  285 DLFIGGTETTATTLSWAVAFLLHHPEIQQRLQEELDRELGPGASGSRIPYRDPTRLPLLSATVAEVLRLRPVVPLALPHCTTRPSSISGYDIPEGMVVIPNLQGAHLDETVWERPQEFRPDRFL-----VPGASPRVLAFGCGARVCLGEPLARLELLVVLAQLLRAF 447          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP21A_CANFA (Steroid 21-hydroxylase OS=Canis familiaris GN=CYP21 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18
Identity = 58/168 (34.52%), Postives = 77/168 (45.83%), Query Frame = -1
Query:   52 DLFVAGTDTTSSTLEWAMAELLRSPDAY------------------------------LQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSF 465
            DLF+ GT+TT++TL WA+A LL  P+                                L A V E LRL P VPL LP        I+G+ +P+G  V  N      DE  WE P  F P+RFL       G +  ++ FG G R+C G PLA   L ++L  L+ +F
Sbjct:  285 DLFIGGTETTATTLSWAVAFLLHHPEIQQRLQEELDRELGPGASGSRIPYRDPTRLPLLSATVAEVLRLRPVVPLALPHCTTRPSSISGYDIPEGMVVIPNLQGAHLDETVWERPQEFRPDRFL-----VPGASPRVLAFGCGARVCLGEPLARLELLVVLAQLLRAF 447          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2DA_MOUSE (Cytochrome P450 2D10 OS=Mus musculus GN=Cyp2d10 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.891e-18
Identity = 57/169 (33.73%), Postives = 78/169 (46.15%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            DLF AG  TTS+TL WA+  ++  PD                            Y  AV+ E  R     PL LPR    D+E+  F++PKG+ +  N  ++ +DE  WE PL F PE FL +   F  +    +PF +GRR C G PLA   L L    L+  F + +
Sbjct:  304 DLFTAGMVTTSTTLSWALLLMILHPDVQRRVQQEIDAVIGQVRHPEMADQARMPYTNAVIHEVQRFGDIAPLNLPRITSRDIEVQDFLIPKGSILIPNMSSVLKDETVWEKPLRFHPEHFLDAQGHFV-KPEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQHFSFSV 471          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP21A_HUMAN (Steroid 21-hydroxylase OS=Homo sapiens GN=CYP21A2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.891e-18
Identity = 55/168 (32.74%), Postives = 76/168 (45.24%), Query Frame = -1
Query:   52 DLFVAGTDTTSSTLEWAMAELLRSPDAY------------------------------LQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSF 465
            DL + GT+TT++TL WA+  LL  P+                                L A + E LRL P VPL LP +      I+G+ +P+G  +  N      DE  WE P  F P+RFL       G+N   + FG G R+C G PLA   L ++L  L+ +F
Sbjct:  287 DLLIGGTETTANTLSWAVVFLLHHPEIQQRLQEELDHELGPGASSSRVPYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSISGYDIPEGTVIIPNLQGAHLDETVWERPHEFWPDRFLE-----PGKNSRALAFGCGARVCLGEPLARLELFVVLTRLLQAF 449          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2DQ_RAT (Cytochrome P450 2D26 OS=Rattus norvegicus GN=Cyp2d26 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.226e-18
Identity = 54/169 (31.95%), Postives = 79/169 (46.75%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            DLF+AG  TTS+TL WA+  ++  PD                            +  AV+ E  R    VP  +P     D++  GF++PKG  +  N  ++ +DE  WE PL F PE FL +  +F  ++   +PF +GRR C G PLA   L L    L+  F + +
Sbjct:  304 DLFMAGMVTTSTTLSWALLLMILHPDVQRRVHEEIDEVIGQVRRPEMADQARMPFTNAVIHEVQRFADIVPTNIPHMTSRDIKFQGFLIPKGTTLIPNLSSVLKDETVWEKPLRFHPEHFLDAQGNFV-KHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSV 471          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2DQ_MOUSE (Cytochrome P450 2D26 OS=Mus musculus GN=Cyp2d26 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.226e-18
Identity = 56/171 (32.75%), Postives = 77/171 (45.03%), Query Frame = -1
Query:   34 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED 465
            DLF+AG  TTS+TL WA+  ++  PD                            Y  AV+ E  R    VP  LP     D++   F +PKG  +  N  ++ +DE  WE PL F PE FL +   F  ++   +PF +GRR C G PLA   L L    L+  F + + D
Sbjct:  304 DLFMAGMVTTSTTLSWALLLMILHPDVQRRVHQEIDEVIGHVRHPEMADQARMPYTNAVIHEVQRFADIVPTNLPHMTSRDIKFQDFFIPKGTTLIPNLSSVLKDETVWEKPLRFYPEHFLDAQGHFV-KHEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQRFSFSVPD 473          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP1A1_CANFA (Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 58/186 (31.18%), Postives = 87/186 (46.77%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLD---FKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL-EDENMDMEEKFGI 465
            DLF AG DT ++ + W++  L+ +P+                            Y++A + ET R    VP  +P     D  ++GF +PKG  VFVN W I  D+  W NP  F PERFL   LD    K  + ++I FG G+R C G  +A   + L L  L+   ++ + E   +DM   +G+
Sbjct:  317 DLFGAGFDTVTTAISWSLLYLVTNPNVQKKIQKELDTVIGRARQPRLSDRPQLPYMEAFILETFRHASFVPFTIPHSTTRDTSLSGFYIPKGRCVFVNQWQINHDQKLWGNPSEFQPERFL--TLDGTINKALSEKVILFGLGKRKCIGETIARLEVFLFLAILLQQVEFSVPEGTKVDMTPIYGL 500          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 57/190 (30.00%), Postives = 90/190 (47.37%), Query Frame = -1
Query:   16 DLFVAGTDTTSSTLEWAM---------------------------AELLRSPDAYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSN------------LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDENMDME 465
            DL VAG +T + TL W +                           A + R   +YL A ++ET+R+  A PL LPR A  D+++ G+ +PKG QV ++ + +  DE  W++P  F PER+L SN            +    ++   IPFG G R+C G+ +A   L+     +  +F W  + D+ +D E
Sbjct:  283 DLIVAGHETVAITLGWMILFLSNHQDVQQKVYDELINVVGKGNLPALVHRKDTSYLNACIQETMRIRTAAPLALPRIASEDIKVGGYTIPKGTQVMMSVYGMASDERYWKDPHIFNPERWLSSNHSTENGGGGGGVVGNSSQSEVFIPFGVGPRMCVGMGVAKDELYYCASQMFMNFKWSPVNDKPIDDE 472          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C516A_DICDI (Probable cytochrome P450 516A1 OS=Dictyostelium discoideum GN=cyp516a1 PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 53/183 (28.96%), Postives = 92/183 (50.27%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED-ENMDMEEKFGI 465
            DL ++GT+T+SST+ W +  L+ +P+                            +  A +KE LR+ P   L LPR A  DV    + + KG+Q+ +N + +  D   WE+P +F P R+L S  D     +  IPFG G R+C G  LA   + L +G+++ ++ ++ ++ + ++ +  FGI
Sbjct:  293 DLLLSGTETSSSTMSWLLLFLINNPNFQDKVRTELLEATGGKKTIGLTEKSKTPFFNACIKEALRIRPVGALSLPRIASEDVTCGPYTIEKGSQIIMNVYGLAMDPTVWEDPETFNPYRWLSS--DISQSTYSFIPFGCGSRVCVGSSLARDEIFLGIGNILLNYIFESQNGKPINEKGHFGI 473          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2J2_HUMAN (Cytochrome P450 2J2 OS=Homo sapiens GN=CYP2J2 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 5.503e-18
Identity = 58/183 (31.69%), Postives = 86/183 (46.99%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDENMDMEEKFGI 465
            DLF AGT+TTS+TL WA+  +   P+                            Y  AV+ E  R+   +PL +PR+   D  +AG+ +PKG  +  N  A+ RD   W  P +F P+ FL  N  FK R    +PF  G+R C G  LA   L +   SL+  F ++   +E + ++ + GI
Sbjct:  307 DLFFAGTETTSTTLRWALLYMALYPEIQEKVQAEIDRVIGQGQQPSTAARESMPYTNAVIHEVQRMGNIIPLNVPREVTVDTTLAGYHLPKGTMILTNLTALHRDPTEWATPDTFNPDHFL-ENGQFKKRE-AFMPFSIGKRACLGEQLARTELFIFFTSLMQKFTFRPPNNEKLSLKFRMGI 487          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
CP21A_CANLU1.448e-1834.52Steroid 21-hydroxylase OS=Canis lupus GN=CYP21 PE=... [more]
CP21A_CANFA1.448e-1834.52Steroid 21-hydroxylase OS=Canis familiaris GN=CYP2... [more]
CP2DA_MOUSE1.891e-1833.73Cytochrome P450 2D10 OS=Mus musculus GN=Cyp2d10 PE... [more]
CP21A_HUMAN1.891e-1832.74Steroid 21-hydroxylase OS=Homo sapiens GN=CYP21A2 ... [more]
CP2DQ_RAT3.226e-1831.95Cytochrome P450 2D26 OS=Rattus norvegicus GN=Cyp2d... [more]
CP2DQ_MOUSE3.226e-1832.75Cytochrome P450 2D26 OS=Mus musculus GN=Cyp2d26 PE... [more]
CP1A1_CANFA4.214e-1831.18Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 ... [more]
C516B_DICDI4.214e-1830.00Probable cytochrome P450 516B1 OS=Dictyostelium di... [more]
C516A_DICDI4.214e-1828.96Probable cytochrome P450 516A1 OS=Dictyostelium di... [more]
CP2J2_HUMAN5.503e-1831.69Cytochrome P450 2J2 OS=Homo sapiens GN=CYP2J2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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