CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.539e-39
Identity = 80/186 (43.01%), Postives = 110/186 (59.14%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK----LEDENMDMEEKFGI 465
            D+  AG DTT+ ++EWAMAEL+R+P                             YLQ V KE +RLHP  PL+LP +A A+V++ G+ +PKG+ V VN WA+ RD   W++PL F PERFL  ++D KG +F L+PFGSGRR+CPG  L I +   MLG L++ F W     ++ E +DM E  G+
Sbjct:  296 DMITAGMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIGLERVMTEADFSNLPYLQCVTKEAMRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGL 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.539e-39
Identity = 81/187 (43.32%), Postives = 118/187 (63.10%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D+F+AG +T+++T+ WAM EL+R+P                              Y + V+KET RLHPA PLLLPR+A+A ++I G+ +P+  Q+ VN +AIGRD   WENP  F PERF+ S++D++G NFEL+PFGSGRRICPG+ + I  + L L +L+  FDW L +    +++D+EE+  I
Sbjct:  299 DIFLAGVNTSATTILWAMTELIRNPRVMKKVQDEVRTVLGEKRDRITEQDLNQLNYFKLVIKETFRLHPAAPLLLPREAMAKIKIQGYDIPEKTQIMVNVYAIGRDPDLWENPEEFKPERFVDSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAI 485          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.315e-39
Identity = 84/187 (44.92%), Postives = 114/187 (60.96%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE--NMDMEEKFGI 465
            +LF AGTDT+SS +EWA+AE++++P                             YL+A+ KET R HP+ PL LPR +     + G+ +PK  ++ VN WAIGRD   WENPL F PERFL    S +D +G +FELIPFG+GRRIC G  + I M+  +LG+L++SFDWKL  E   ++MEE FG+
Sbjct:  297 NLFTAGTDTSSSAIEWALAEMMKNPAILKKAQGEMDQVIGNNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGL 483          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.315e-39
Identity = 84/187 (44.92%), Postives = 114/187 (60.96%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE--NMDMEEKFGI 465
            +LF AGTDT+SS +EWA+AE++++P                             YL+A+ KET R HP+ PL LPR +     + G+ +PK  ++ VN WAIGRD   WENPL F PERFL    S +D +G +FELIPFG+GRRIC G  + I M+  +LG+L++SFDWKL  E   ++MEE FG+
Sbjct:  297 NLFTAGTDTSSSAIEWALAEMMKNPAILKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGL 483          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.330e-39
Identity = 87/188 (46.28%), Postives = 114/188 (60.64%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVP-LLLPRKALADVEIAGFI-VPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D F AGTDTT +TL+W MAELLR P A                           YL+AV+KE+LRLHP    LL+PR+++ DV + G+  +P   Q  +NAWAIGRD L+WENP  + PERFL S+ D KG NF+L+PFG+GRR CPG   AI ++ L L  L++ FD+ L +    E++DM E  GI
Sbjct:  303 DSFAAGTDTTFATLDWTMAELLRQPRALKTLQDEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGI 490          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.655e-39
Identity = 85/187 (45.45%), Postives = 109/187 (58.29%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLG---SNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED--ENMDMEEKFGI 465
            DLF AGTDT+SS +EWA+AE+L                                Y QA+ KET R HP+ PL LPR +    E+ GF +PK  ++ VN WAIGRD   WENPL F PERFL    + +D +G +FELIPFG+GRRIC G  +    +  +LG+L++SFDWKL D    ++MEE FGI
Sbjct:  314 DLFTAGTDTSSSVIEWALAEMLNHRQILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNLPRISTEACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGVVEVNMEESFGI 500          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.386e-39
Identity = 85/187 (45.45%), Postives = 117/187 (62.57%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSP----------DA-----------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDEN--MDMEEKFGI 465
            D+FVAGTDT+++T+EWAMAEL+ +P          DA                 YLQA+V+ETLR+HP  PL++ R++   V + G+ +P   ++FVN WAIGRD   WENP  F PERF     S LD +G+++  IPFGSGRR CPG  LA++++H+ L  +I  F WK ++ N  +DMEEK GI
Sbjct:  295 DIFVAGTDTSAATMEWAMAELINNPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIV-RESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGI 480          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.386e-39
Identity = 80/187 (42.78%), Postives = 113/187 (60.43%), Query Frame = -1
Query:    1 QDLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 468
            QD+F+ G +T+SS +EW M+EL+R+P                             YL++++KET+RLHP VPLL+PR +    +I G+ +P   ++ +NAWAIGR+   W    SF PERFL S++DF+G +FE IPFG+GRRICPG+  AI  + L L  L+  FDWKL    ++E +DM E  GI
Sbjct:  307 QDIFIGGGETSSSVVEWGMSELIRNPRVMEEAQAEVRRVYDSKGYVDETELHQLIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGI 493          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.260e-38
Identity = 83/190 (43.68%), Postives = 111/190 (58.42%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL----GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            ++F AGTDT++ST++WA+AEL+R PD                            YLQAV+KE  RLHP  PL LP  A    EI G+ +PKG+ +  N WAI RD   W +PL+F PERFL     S +D KG +FELIPFG+GRRIC GL L +R +  +  +L+  FDW+L      E ++MEE +G+
Sbjct:  298 NMFTAGTDTSASTVDWAIAELIRHPDIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGL 487          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.260e-38
Identity = 78/186 (41.94%), Postives = 108/186 (58.06%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK----LEDENMDMEEKFGI 465
            D+  AG DTT+ T EWAMAE++++P                             YLQ VVKE+ RLHP  PL+LP ++ ADV+I G+ +PKG+ V VN WA+ RD   W+NP  F PERFL  ++D KG +F L+PFG+GRR+CPG  L I ++  M+  L++ F W      + E +DM E  G+
Sbjct:  295 DMITAGMDTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVGLDRILTEADFSRLPYLQCVVKESFRLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGL 480          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C98A2_SOYBN2.539e-3943.01Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71BN_ARATH2.539e-3943.32Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C75A3_PETHY3.315e-3944.92Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C75A1_PETHY3.315e-3944.92Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71A2_SOLME4.330e-3946.28Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C75A6_CAMME5.655e-3945.45Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C93A2_SOYBN7.386e-3945.45Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71DA_SOYBN7.386e-3942.78Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
F3PH_ARATH1.260e-3843.68Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C98A3_ARATH1.260e-3841.94Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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