CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C5081_DICDI (Probable cytochrome P450 508A1 OS=Dictyostelium discoideum GN=cyp508a1-1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.731e-17
Identity = 58/183 (31.69%), Postives = 86/183 (46.99%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK-LEDENMDMEEKFGI 465
            D F+AG DT+S+ LE  +  L   P+                            YL AV+KETLR  P  P  LPR +  D  I G  +PK AQ+ +N  A+G +E  +ENP  F P RFL         N   +PF  G R C G   A   L++ + +++ +F  K ++ + +D  E++G+
Sbjct:  290 DFFLAGVDTSSTALESMVLMLTNYPEIQEKAFDEIKTVVNGRSKVNLSDRQSTPYLVAVIKETLRYKPMSPFGLPRSSSKDCMIGGHFIPKNAQILINYQALGMNEEYYENPEQFDPSRFLKVE-----SNVAFLPFSIGIRSCVGQSFAQDELYICISNILLNFKLKSIDGKKIDETEEYGL 467          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2D6_HUMAN (Cytochrome P450 2D6 OS=Homo sapiens GN=CYP2D6 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 3.567e-17
Identity = 55/169 (32.54%), Postives = 75/169 (44.38%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            DLF AG  TTS+TL W +  ++  PD                            Y  AV+ E  R    VPL +      D+E+ GF +PKG  +  N  ++ +DE  WE P  F PE FL +   F  +    +PF +GRR C G PLA   L L   SL+  F + +
Sbjct:  301 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 468          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP1A1_SHEEP (Cytochrome P450 1A1 OS=Ovis aries GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.567e-17
Identity = 57/184 (30.98%), Postives = 86/184 (46.74%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDF-KGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL-EDENMDMEEKFGI 465
            DLF AG DT ++ + W++  L+ SP                             YL+A + ET R    VP  +P     D  + GF +PKG  VFVN W I  D+  WE+P  F PERFL ++    K  + ++I FG G+R C G  +A   + L L  L++  ++ +     +DM   +G+
Sbjct:  320 DLFGAGFDTVTTAISWSLLYLVTSPRVQKKIQEELDTVIGRARWPQLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTNLNGFYIPKGXCVFVNQWQINHDQKLWEDPSEFRPERFLTTDGTVNKVLSEKVIIFGLGKRQCIGEIIARLEVFLFLAILLHQVEFHVTPGVKVDMTPLYGL 503          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP1A1_MOUSE (Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 3.567e-17
Identity = 55/184 (29.89%), Postives = 81/184 (44.02%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIP-FGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE-DENMDMEEKFGI 465
            DLF AG DT ++ + W++  L+ +P                             YL+A + ET R    VP  +P     D  + GF +PKG  VFVN W +  D   W +P  F PERFL  +     R  E +  FG G+R C G  +    + L L  L+   ++K+   E +DM   +G+
Sbjct:  317 DLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTSLNGFYIPKGCCVFVNQWQVNHDRELWGDPNEFRPERFLTPSGTLDKRLSEKVTLFGLGKRKCIGETIGRSEVFLFLAILLQQIEFKVSPGEKVDMTPTYGL 500          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2J5_MOUSE (Cytochrome P450 2J5 OS=Mus musculus GN=Cyp2j5 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.947e-17
Identity = 58/183 (31.69%), Postives = 82/183 (44.81%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE-DENMDMEEKFGI 465
            DLF+ GT+TTSSTL WA+  +   P+                            Y  AV+ E  R+   VPL   R+   D +  GF +PKG  +  N  A+ RD   W  P  F PE FL  N  FK R    +PF  G+R C G  LA   L +   +L+  F +K   +E + ++ + G+
Sbjct:  306 DLFLGGTETTSSTLRWALLYMSSYPEIQENVQAEIDRVIGHKRQVSLSDRESMPYTNAVIHEVQRMGNIVPLNSSREVTVDTKFNGFHLPKGTMILTNLTALHRDPKEWATPEVFNPEHFL-ENGQFKKRE-SFLPFSMGKRACLGEQLAKSELFIFFSALMQKFTFKPPINEKLSLKFRMGL 486          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP306_DROME (Cytochrome P450 306a1 OS=Drosophila melanogaster GN=phm PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16
Identity = 55/180 (30.56%), Postives = 85/180 (47.22%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRS------------------------PDAYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL-EDENMDMEEKFGI 465
            DLF AG DT+ +TL W +  L R                         P AYL+A + ET+R+   VPL +P     +  +  + +  G+ +  + WAI  D + +  P  F PERFL ++  ++    + IPF SG R+CPG  +A  +L L  G ++  F  +L     +DM  + GI
Sbjct:  366 DLFGAGVDTSLATLRWFLLYLAREQRCQRRLHELLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPP-QFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGTEVDMAGESGI 544          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSN--LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE-DENMDMEEKFGI 465
            DLF AG DT ++ + W++  L+ +P                             Y++A + ET R    VP  +P     D  + GF +PKG  VFVN W I  D+  W NP  F+PERFL  +  +D K  + ++I FG G+R C G  +A   + L L  L+   ++ +     +DM   +G+
Sbjct:  313 DLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGL 496          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16
Identity = 45/171 (26.32%), Postives = 80/171 (46.78%), Query Frame = -1
Query:   40 VAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSN-----LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 456
            +A  D  ++ +EW + E+L++P+                            YL+A  +ET R+HP+   + P  A  D  + G+ +PKG+ + V    +GR+   W++PL++ PER L  +     +         + F +GRR C G+ +   M+ +ML   +  F+WKL
Sbjct:  327 IAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIRNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGFNWKL 497          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C508B_DICDI (Probable cytochrome P450 508B1 OS=Dictyostelium discoideum GN=cyp508b1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16
Identity = 56/184 (30.43%), Postives = 88/184 (47.83%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAG--FIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEEKFGI 465
            D+F+AG DTT++++ W +  +   P+                            YL A++KE LRL+P  P  LP ++  D+ I    + +PK +Q+ VN   +G +E  +ENP  F P RFL  N      N   +PFG G R C GL LA    +L   +++ +F+ K     +   E+FG+
Sbjct:  292 DMFLAGNDTTAASIIWFVLRMQEHPEIQLKAYNEIKDAVGDRDRVLLSDRPKTPYLNAIIKEILRLNPVGPFGLPHRSSNDIVIGNGKYFIPKDSQILVNYRGLGFNEKYFENPSQFDPSRFLNKN------NDAYMPFGVGDRKCVGLQLAGDEQYLSFSNILLNFNLKNIGTPVSDYEEFGL 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP2DP_PIG (Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D25 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 1.770e-16
Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = -1
Query:   40 LFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 462
            LF AG  TTS+TL WA+  ++  PD                            +  AV+ E  R    VPL +      D+E+ GF++PKG  +  N  ++ +DE  W+ P  F PE FL +   F  +    +PF +GRR C G PLA   L L   +L+ +F + +
Sbjct:  305 LFSAGMITTSTTLAWALLLMILHPDVQRRVQQEIDEVIGHVRQPEIKDQALMPFTLAVLHEVQRFGDIVPLGVAHMTSCDIEVQGFLIPKGTTLITNLTSVLKDETVWKKPFRFYPEHFLDAQGRFT-KQEAFMPFSAGRRSCLGEPLARMELFLFFTTLLQAFSFSV 471          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C5081_DICDI2.731e-1731.69Probable cytochrome P450 508A1 OS=Dictyostelium di... [more]
CP2D6_HUMAN3.567e-1732.54Cytochrome P450 2D6 OS=Homo sapiens GN=CYP2D6 PE=1... [more]
CP1A1_SHEEP3.567e-1730.98Cytochrome P450 1A1 OS=Ovis aries GN=CYP1A1 PE=2 S... [more]
CP1A1_MOUSE3.567e-1729.89Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1... [more]
CP2J5_MOUSE7.947e-1731.69Cytochrome P450 2J5 OS=Mus musculus GN=Cyp2j5 PE=2... [more]
CP306_DROME1.038e-1630.56Cytochrome P450 306a1 OS=Drosophila melanogaster G... [more]
CP1A1_HUMAN1.038e-1630.27Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]
C79F2_ARATH1.038e-1626.32Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C508B_DICDI1.038e-1630.43Probable cytochrome P450 508B1 OS=Dictyostelium di... [more]
CP2DP_PIG1.770e-1630.95Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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