CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.376e-37
Identity = 79/186 (42.47%), Postives = 109/186 (58.60%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            DLF AGT+T+S+T  WAMAE+L++P                             YL+ V+KET+RLH  VPLL+PR+   + EI G+ +P   +V VN WA+GRD   W++  SF PERF   ++DF G NFE +PFG GRRICPG+   +  ++L L  L+  FDWKL    E +++D+ E  GI
Sbjct:  298 DLFAAGTETSSTTTVWAMAEMLKNPSVFAKAQAKVREAFRDKVTFDENDVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGI 483          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.376e-37
Identity = 73/176 (41.48%), Postives = 109/176 (61.93%), Query Frame = -1
Query:   22 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD 465
            D+ V GTDT+ + +EWAM ELL  P+                            YL+AV+KET+RLHP +PL++P ++  DV +  + +P G QV +NAWAIGR+  TW  +   F PER L S++DF+G NFELIPFG+GRRICP +  A+ ++ + L +L++ +DW+L +E ++
Sbjct:  288 DVVVGGTDTSYALMEWAMTELLHRPECLNRLQEEVRTICKGNSSVSEDDIKDMNYLKAVIKETMRLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIE 463          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.376e-37
Identity = 82/187 (43.85%), Postives = 112/187 (59.89%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFI-VPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            D F AGTDT  + L+W MA++LR P A                           YL+AV+KE+LRLHP   LL+PR+++ DV++ G+  +P   Q  +N WAIGRD L+WENP  F PERFL +++D KG  FEL+PFGSGRR CPG   AI ++ L L  L++ F++ L    + E++DM E  GI
Sbjct:  304 DAFAAGTDTIYTNLDWTMADVLRQPRAMKTLQNEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGI 490          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.103e-37
Identity = 75/186 (40.32%), Postives = 112/186 (60.22%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            ++ + G  T++ T+ WAM EL+R+P                             YL+ V+ ET RLHP  PLL+PR+ +++ EI G+ +P   +++VN W IGRD  TW++P  F+PERF+ SN+D KG+NFEL+PFGSGRR+CP + +   M+   L +L+  FDWKL +    E++DMEE  G+
Sbjct:  297 NVLLGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGGKSMICLDDIDQLHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWKDPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEESPGL 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.053e-37
Identity = 73/186 (39.25%), Postives = 116/186 (62.37%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            ++ +AG DT+  T+ W M  L+++P                             YL+ V+KETLR++P VPLL+PR+A   ++I G+ +PK   ++VN WA+ R+   W++P  F+PERF+ S +D+KG +FEL+PFGSGRR+CPG+ L + ++HL L +L+  FDWKL +    E++D+EE +G+
Sbjct:  293 NVLIAGVDTSGHTVTWVMTHLIKNPRVMKKAQAEVREVIKNKDDITEEDIERLEYLKMVIKETLRINPLVPLLIPREASKYIKIGGYDIPKKTWIYVNIWAVQRNPNVWKDPEVFIPERFMHSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEESYGL 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.293e-37
Identity = 78/189 (41.27%), Postives = 117/189 (61.90%), Query Frame = -1
Query:   13 QGFI*QDLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 483
            +GF+  ++F+AG DT + T+ WAM EL+++P                              YL+ V+KET RLHPA PL+LPR+ +A +++ G+ +P   ++ VN  AIGRD   W NP  F PERF+ S++D++G+++EL+PFGSGRRICPG+P+ I  + L L +L+  FDWKL D    +++D EE
Sbjct:  295 KGFL-ANIFLAGIDTGALTMIWAMTELVKNPKLIKKVQGEIREQLGSNKARITEEDIDKVPYLKMVIKETFRLHPAAPLILPRETMAHIKVQGYDIPPKRRILVNVSAIGRDPKLWTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEE 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.913e-37
Identity = 81/187 (43.32%), Postives = 111/187 (59.36%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE--NMDMEEKFGI 465
            ++F AGTDT+SS +EWA+AELL++P                             YLQA+ KE  R HP+ PL LPR A    E+ G  +PKG ++ VN WAIGRD   WENP  F P+RFL    + +D +G +FELIPFG+GRRIC G  L I ++  +LG+L++SF W+L      ++M+E FG+
Sbjct:  301 NMFTAGTDTSSSVIEWALAELLKNPIILRRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELPSSVIELNMDESFGL 487          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.913e-37
Identity = 72/176 (40.91%), Postives = 110/176 (62.50%), Query Frame = -1
Query:   22 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD 465
            D+ VAGTD++ + ++WAM ELLR P+                           +YL+AV+KET RLHP +PLL P +++ DV +  + +P G QV +NAWAIGR+  TW  +   F PER L S++DF+G NFEL+PFG+GRRICP +  A+ ++ + L + ++ +DWKL +++ +
Sbjct:  288 DVLVAGTDSSYALMDWAMTELLRHPECLRTLQEEVRTICKGNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKE 463          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.029e-37
Identity = 82/189 (43.39%), Postives = 116/189 (61.38%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKAL-ADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFL---GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL--EDENMDMEEKFGI 465
            +LF AGTDT+SS +EWA+AELL++                              YLQA+ KET R HP+ PL LPR  +   V++ G+ +PKG ++ VN WAIGRD   W +NP  F PERFL    + +D +G +FELIPFG+GRRIC G  + I ++  +LG+L++SFDWKL   ++ ++M+E FG+
Sbjct:  305 NLFTAGTDTSSSIIEWALAELLKNRTLLTRAQDEMDRVIGRDRRLLESDIPNLPYLQAICKETFRKHPSTPLNLPRNCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGL 493          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.029e-37
Identity = 74/176 (42.05%), Postives = 110/176 (62.50%), Query Frame = -1
Query:   22 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD 465
            D+FV G+DT+ + LEWAM ELLR P +                           YL+AV+KE LRLHP  P++ P ++  DV++  + +P G QV +NAWAIGR+  TW  +   F PER L +++DF+G+NFEL+PFG+GRRICP +  A+ +  ++L +L++ FDWKL +E+ +
Sbjct:  287 DVFVGGSDTSFTLLEWAMTELLRHPKSLNRLQEEVRTICKGKSRVSEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKE 462          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C71D7_SOLCH2.376e-3742.47Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71AM_ARATH2.376e-3741.48Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME2.376e-3743.85Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71BY_ARATH3.103e-3740.32Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH4.053e-3739.25Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH5.293e-3741.27Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C75A7_EUSGR6.913e-3743.32Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71AL_ARATH6.913e-3740.91Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C75A4_GENTR9.029e-3743.39Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71AP_ARATH9.029e-3742.05Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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