CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C555A_DICDI (Probable cytochrome P450 555A1 OS=Dictyostelium discoideum GN=cyp555a1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.820e-11
Identity = 42/128 (32.81%), Postives = 65/128 (50.78%), Query Frame = -1
Query:   25 RSPDAYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLA---IRMLHLMLGSLINSFDWKLEDENM 399
            +S   Y  +V+KE  R     PL  P +   D+ + G+ +P G+Q+  N ++   ++  WENP  F P+RFL +N   K    +LI FG G R C G   A   I +++L+L   I     KL +E +
Sbjct:  342 KSKTPYYNSVLKEVERRFTVSPLSQPHRTNKDIILNGYFIPSGSQIIQNVYSCHLNDKDWENPFQFNPDRFLNNNQLEK----KLITFGMGPRNCLGFQFALMSIWIVNLILFKSIKFSSNKLIEEEI 465          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C85A_PHAVU (Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11
Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = -1
Query:   43 YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWK 384
            + +AV+ ET RL   V  +L RK   D+E+ G+++PKG +++V    I  D   + +PL+F P R+LG++L+ +      + FG G R CPG  L I  +   L   +  + W+
Sbjct:  329 FTRAVIFETSRLATIVNGVL-RKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGNSLESQS---HFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C135B_MYCTU (Putative cytochrome P450 135B1 OS=Mycobacterium tuberculosis GN=CYP135B1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11
Identity = 48/154 (31.17%), Postives = 69/154 (44.81%), Query Frame = -1
Query:   61 LFVAGTDTTSSTLEWAMAELLRSP--------------------DAYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLI 462
            L VAG DTT++ L WA+  L R P                    D YL AV KETLR+ P V   + R     VE+AG+ +P G  V      +      + +P  F P+R +G+ L         +PFG G R C G   A+  + ++L  ++
Sbjct:  258 LLVAGHDTTATGLSWALERLTRHPVTLAKAVQAADASAAGDPAGDEYLDAVAKETLRIRPVV-YDVGRVLTEAVEVAGYRLPAGVMVVPAIGLVHASAQLYPDPERFDPDRMVGATLS----PTTWLPFGGGNRRCLGATFAMVEMRVVLREIL 406          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C135B_MYCBO (Putative cytochrome P450 135B1 OS=Mycobacterium bovis GN=CYP135B1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11
Identity = 48/154 (31.17%), Postives = 69/154 (44.81%), Query Frame = -1
Query:   61 LFVAGTDTTSSTLEWAMAELLRSP--------------------DAYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLI 462
            L VAG DTT++ L WA+  L R P                    D YL AV KETLR+ P V   + R     VE+AG+ +P G  V      +      + +P  F P+R +G+ L         +PFG G R C G   A+  + ++L  ++
Sbjct:  258 LLVAGHDTTATGLSWALERLTRHPVTLAKAVQAADASAAGDPAGDEYLDAVAKETLRIRPVV-YDVGRVLTEAVEVAGYRLPAGVMVVPAIGLVHASAQLYPDPERFDPDRMVGATLS----PTTWLPFGGGNRRCLGATFAMVEMRVVLREIL 406          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: THAS_MOUSE (Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11
Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = -1
Query:   31 YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 384
            YL  V+ ETLR++P       R+A  D E+ G  +P G  + +   A+  D   W NP +F PERF  +    + R F  +PFG+G R C G+ L + ++ L +  +++ F ++   E
Sbjct:  392 YLDMVISETLRMYPPA-FRFTREAAQDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPETFDPERFT-AEARLQRRPFTYLPFGAGPRSCLGVRLGLLVVKLTILQVLHKFRFEASPE 507          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: THAH_ARATH (Cytochrome P450 708A2 OS=Arabidopsis thaliana GN=CYP708A2 PE=2 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = -1
Query:   28 ELLRSPDAYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDEN 408
            E  R    +   V+ ETLR+    P++  RKA+ DVEI G+ +P G  V V   A+  ++  +ENPL F P R+ G  L    + F  + FG G R C G   A   + + +  L+ ++D+ L  E+
Sbjct:  332 EEYRHQMTFTNMVINETLRMANMAPIMY-RKAVNDVEIKGYTIPAGWIVAVIPPAVHFNDAIYENPLEFNPWRWEGKELRSGSKTF--MVFGGGVRQCVGAEFARLQISIFIHHLVTTYDFSLAQES 455          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: PID6_FUSSO (Pisatin demethylase OS=Fusarium solani subsp. pisi GN=PDA6-1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = -1
Query:   25 YLQAVVKETLRLHPAVPLLLPRKA-LADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLS-FMPERFLGS--NLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENM 384
            YLQAV+KE LRLHP V   L R      + I G   P+GA+V VN WA+  ++  + N  S F PER+L +  NL+  G       FG+G R C G  ++I  +   +  ++ +FD ++   +M
Sbjct:  364 YLQAVIKEALRLHPGVGTQLTRVVPKGGLVIEGQFFPEGAEVGVNGWALYHNKAIFGNDASVFRPERWLETKGNLNIGGS----FAFGAGSRSCIGKNISILEMSKAIPQIVRNFDIEINHGDM 483          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: CP311_DROME (Probable cytochrome P450 311a1 OS=Drosophila melanogaster GN=Cyp311a1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 42/167 (25.15%), Postives = 73/167 (43.71%), Query Frame = -1
Query:   31 AGTDTTSSTLEWAMAELLRSPDA--------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 453
            AG DTT++ + + +  L + P+                           YL+A++KE LRL+  VP    R+     EI G     G  +++N + +  D+  + +P +F PER+L  +       F  IPF  G  +C G   ++ ++ L+   L+  F  +L  E
Sbjct:  293 AGVDTTTAAMSFVLYALAKFPETQTRLRKELQDVALDETTDLDALNGLPYLEALIKEVLRLYTIVPTT-GRQTTQSTEIGGRTYCAGVTLWINMYGLAHDKEYYPDPYAFKPERWLPEDGAVAPPAFSYIPFSGGPHVCIGRRYSLLLMKLLTARLVREFQMELSPE 458          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C2G1L_HUMAN (Putative cytochrome P450 2G1-like protein OS=Homo sapiens PE=5 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 37/111 (33.33%), Postives = 57/111 (51.35%), Query Frame = -1
Query:   52 YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSF 384
            Y   V+ E  RL   VP+ +P   + D +  G+++PKG  VF    ++ +D   +  P +F P+ FL     FK +N   +PF SG+RIC G  +A   L L   S + +F
Sbjct:    3 YTDVVIHEIQRLVDIVPMGVPHNIIQDTQFRGYLLPKGTDVFPLLGSVLKDPKYFRYPDAFYPQHFLDEQGRFK-KNEAFVPFSSGKRICLGEAMARMELFLYFTSTLQNF 112          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C555A_DICDI3.820e-1132.81Probable cytochrome P450 555A1 OS=Dictyostelium di... [more]
C85A_PHAVU4.989e-1133.33Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 ... [more]
C135B_MYCTU4.989e-1131.17Putative cytochrome P450 135B1 OS=Mycobacterium tu... [more]
C135B_MYCBO4.989e-1131.17Putative cytochrome P450 135B1 OS=Mycobacterium bo... [more]
THAS_MOUSE6.516e-1132.20Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 P... [more]
THAH_ARATH8.510e-1133.07Cytochrome P450 708A2 OS=Arabidopsis thaliana GN=C... [more]
PID6_FUSSO8.510e-1136.29Pisatin demethylase OS=Fusarium solani subsp. pisi... [more]
CP311_DROME8.510e-1125.15Probable cytochrome P450 311a1 OS=Drosophila melan... [more]
C2G1L_HUMAN8.510e-1133.33Putative cytochrome P450 2G1-like protein OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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