CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.029e-37
Identity = 78/182 (42.86%), Postives = 107/182 (58.79%), Query Frame = -1
Query:    4 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEEKFG 465
            D FV GTDT+S+ +EW M ELLR P                             YL+AVVKE LRLHP VPL++P ++  DV +    +P G QV VN WA+GR+  TW  +   F PER L S  DF+G++FELIPFG+GRR+CPG+  A+ +  ++L +L++ FDW+  D+  D+ E  G
Sbjct:  285 DAFVGGTDTSSTLVEWEMTELLRHPTCLKKLQEEVRTICKGKSSVSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDETDVAESIG 466          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.540e-36
Identity = 76/173 (43.93%), Postives = 106/173 (61.27%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F+AG  T+S+TL WAM EL+R+P                              Y + +VKE  RLHPA PLLLPR+ L+ V+I G+ +P   Q+ +NA+AI RD   W NP  F P+RFL S++D++G NFEL+PFGSGRRICPG+ + I ++ L L +L+  FDW L ++
Sbjct:  296 DIFLAGVGTSSTTLIWAMTELIRNPRVMKKVQDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEK 468          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.540e-36
Identity = 74/182 (40.66%), Postives = 111/182 (60.99%), Query Frame = -1
Query:    1 AGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 453
            AG DT++  + W M  L+ +P                             YL+ V+KET R++P VPLL+PR+A  DV+I G+ +PK   + VN WAI R+   W++P +F+PERF+ S +D+KG NFEL+PFGSGRRICPG+ + + ++HL L +L+  FDWKL +     ++D+EE +G+
Sbjct:  297 AGIDTSAQVMTWVMTYLISNPRVLKKAQAEVREVIKHKDDIIEEDIERLQYLKMVIKETFRINPLVPLLIPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGL 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.540e-36
Identity = 75/176 (42.61%), Postives = 109/176 (61.93%), Query Frame = -1
Query:   22 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLS-FMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMD 465
            ++FV GTDT+S+ +EWAM ELLR P                            +YL+AV+KE LRLHP +PL++P ++  DV +    +P G QV +NAWAIGR+  TW   +  F PER L S++D++G+ FELIPFGSGRRICP +  A+ +  ++L +L++ FDW+L  E+ +
Sbjct:  287 NVFVGGTDTSSTLMEWAMTELLRHPKCLKRLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTE 462          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.011e-36
Identity = 76/183 (41.53%), Postives = 109/183 (59.56%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPD----------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 465
            ++ +AG DT + T+ W M EL R+P+                             +L  V+KET RLHP  PLLLPR+ +A V++ G+ +P   ++ VNAWAIGRD   W +P  F PERF+ S +D++G++FEL+PFGSGRRICPG+ + +  L L L +L+  FDWKL D    +++D EE
Sbjct:  300 NIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEE 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.627e-36
Identity = 79/183 (43.17%), Postives = 106/183 (57.92%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEE 465
            D F+   DT+S T+ WAM+EL+R P                              YL+ VVKETLRLHP   LL+PR+ + D  I G+ VP   +VFVNAWAIGRD  +W  P  F P+RF+GS++D+ G +FELIPFG+GRRICPGL +    +   L +L+  +DW L    + E++ MEE
Sbjct:  324 DTFIGAIDTSSVTILWAMSELMRKPQVLRKAQAEVRAAVGDDKPRVNSEDAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEE 506          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.431e-36
Identity = 77/189 (40.74%), Postives = 116/189 (61.38%), Query Frame = -1
Query:   13 QGFI*QDLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 483
            +GF+  ++F+AG DT + T+ WA+ EL+++P                              YL+ V+KET RLHPA PL+LPR+ +A +++ G+ +P   ++ VN  AIGRD   W NP  F PERF+ S +D++G+++EL+PFGSGRRICPG+P+ I  + L L +L+  FDWKL D    +++D EE
Sbjct:  295 KGFL-ANIFLAGIDTGAITMIWAVTELVKNPKLIKKVQGDIREQLGSNKERITEEDIEKVPYLKMVIKETFRLHPAAPLILPRETMAHIKVQGYDIPPKRRILVNVSAIGRDPKLWTNPKEFDPERFMDSFVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEE 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.431e-36
Identity = 78/192 (40.62%), Postives = 110/192 (57.29%), Query Frame = -1
Query:    1 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFGI 477
            F+  D+F+ GT TTS+ LEW M EL+RSP +                            YL+AV+KE LRLHP++P++LPR    DV++ G+ +  G +V +NAWAI RD   W  +   F PER L S LD+ G+N   IPFGSGRRICPG+ LA+ +  + + +L+  FDW++E     +  D+ E  GI
Sbjct:  290 FMILDMFIGGTSTTSTLLEWTMTELIRSPKSMKKLQDEIRSTIRPHGSYIKEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGI 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.481e-36
Identity = 83/187 (44.39%), Postives = 112/187 (59.89%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL--GSN-LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDEN--MDMEEKFGI 465
            D+FVAGTDT++ ++EWAMAEL+ +PD                            YLQA+V+ETLRLHP  PL++ R++     + G+ +P   ++FVN WAIGRD   WE P  F PERF+  G N LD +G+++  IPFGSGRR CPG  LA +++ + L  +I  F WKL   N  +DMEEK GI
Sbjct:  302 DIFVAGTDTSAVSIEWAMAELINNPDVLEKARQEIDAVVGKSRMVEESDIANLPYLQAIVRETLRLHPGGPLVV-RESSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSGI 487          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 5.852e-36
Identity = 75/186 (40.32%), Postives = 113/186 (60.75%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            ++ +   +T++ T+ WAMAEL+R+P                             YL+ V+KET RLHP VPLLLPR+ +++ EI G+ +     ++VN WAIGRD  +W++   F PERF+ +N+D KG+NFEL+PFGSGRRICPG+ +   M+   L +++  FDW++ D    E++DMEE  G+
Sbjct:  297 NVLLGAINTSAMTMTWAMAELIRNPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPGL 482          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C71AN_ARATH9.029e-3742.86Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH1.540e-3643.93Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH1.540e-3640.66Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH1.540e-3642.61Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH2.011e-3641.53Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI2.627e-3643.174-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BJ_ARATH3.431e-3640.74Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH3.431e-3640.63Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN4.481e-3644.39Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71B9_ARATH5.852e-3640.32Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
back to top