CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.852e-36
Identity = 83/192 (43.23%), Postives = 109/192 (56.77%), Query Frame = -1
Query:    1 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWE-NPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW----KLEDENMDMEEKFGI 477
            FI  D+F+ GT TT+S LEW M EL+R P+                             YL+AV+KE LRLHP  PLL+ R    DV++ G+ +  G QV  NAWAI RD +TW  +   F PER L S LDF+G NFE IPFGSGRRICPG+  A+ ++ + L +L+N F+W    +L  +  D+ E  GI
Sbjct:  290 FIILDIFLGGTTTTNSLLEWTMTELIRHPECMKKLQDEIRGDATNLTIYRSHEEVEDMKYLKAVIKEGLRLHPPFPLLVLRLLTQDVKLKGYDIAAGTQVITNAWAIQRDIVTWGIDAEEFRPERHLDSPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGI 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 9.983e-36
Identity = 74/182 (40.66%), Postives = 110/182 (60.44%), Query Frame = -1
Query:    1 AGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 453
            AG DT++  + W M  L+ +P                             YL+ VVKET R+ P VPLL+PR+A  DV+I G+ +PK   + VN WAI R+   W++P +F+PERF+ + +D+KG NFE +PFGSGRR+CPG+ + + ++HL L +L+  FDWKL    E E++D+EE +G+
Sbjct:  297 AGIDTSAQVMTWVMTYLISNPRVMKKAQAEVREVIKNKDDIIEEDIERLEYLKMVVKETFRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGL 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.304e-35
Identity = 75/189 (39.68%), Postives = 112/189 (59.26%), Query Frame = -1
Query:   13 QGFI*QDLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 483
            +GF+  ++ +AG DT + T+ WAM EL R+P+                             +L  V+KET RLHP  PLLLPR+ +  +++ G+ +P   ++ VN WAIGRD   W NP  F PERF+ + +D++G++FEL+PFGSGRRICPG+ L I ++ L L +L+  FDW+  D    +++D EE
Sbjct:  295 KGFL-TNIIIAGIDTGALTMIWAMTELARNPELMKNVQGEIRDSFGNNKERITKEDLNKVPFLNMVIKETFRLHPVAPLLLPRETMTHIKVQGYDIPPKRRILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHKDIDTEE 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.304e-35
Identity = 76/173 (43.93%), Postives = 104/173 (60.12%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F+AGT TT S LEWAM EL+R+P                             YLQAV+KE LRL P  PLL+PR    DV++ G+ +P G QV VNAWAI RD  TW  +   F PER L +NLDF+G++F+ IPFGSG+RICPG+     ++ + L +++  F+W+++ E
Sbjct:  296 DMFLAGTATTLSFLEWAMTELMRNPKVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVE 468          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.703e-35
Identity = 77/186 (41.40%), Postives = 109/186 (58.60%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            D+F  G+DT+S+T+ WAMAE++++P                             YL++VV ETLRLHP  PLLLPR+     EI G+ +P  ++V VNAWAIGRD   W     F PERF+  ++++K  +FE IPFG+GRR+CPGL   +  +  +L  L+  FDWKL    ++E++ M E FGI
Sbjct:  294 DIFGGGSDTSSATITWAMAEMIKNPRTMEKVQTEVRRVFDKEGRPNGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGI 479          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.703e-35
Identity = 75/186 (40.32%), Postives = 113/186 (60.75%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW----KLEDENMDMEEKFGI 465
            ++F AGTDT++STLEWAM+E++++P                            +YL++V+KETLRLHP   L+ PR+ +    I G+ +P   +V +N WAIGRD   W +   F+PERF  S++DFKG +FE IPFG+GRR+CPG+   +  + L L  L+  F+W    K++ E++DM+E FG+
Sbjct:  302 NIFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQLI-PRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGM 486          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.224e-35
Identity = 74/183 (40.44%), Postives = 110/183 (60.11%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 465
            D+F+AG +  + T+ WAM EL R P                              YL+ V++ET RLHP  PLLLPR+ ++D++I G+ +PK   + +N ++IGRD   WENP  F PERF+ S +++KG+++EL+PFG+GRRICPG+   I ++ L L +++  FDW L D    E++DMEE
Sbjct:  297 DVFLAGVNAGAITMIWAMTELARHPRVMKKLQQEIREILGDNKEKITEQDLEKVHYLKLVIEETFRLHPPAPLLLPRETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFIDSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEE 479          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.905e-35
Identity = 79/187 (42.25%), Postives = 107/187 (57.22%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNL-DFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D+   GT+T +S +EWA+ ELLRSP+                            YL+  +KETLR+HP +PLLL   A  D  I GF +PK ++V +NA+AIGRD  +W +P +F P RFL   + DFKG NFE IPFGSGRR CPG+ L +  L L +  +++ F WKL D      +DM + FG+
Sbjct:  315 DVMFGGTETVASAIEWALTELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLLHETA-EDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGL 500          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.905e-35
Identity = 81/193 (41.97%), Postives = 107/193 (55.44%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLR-----------------SPDA---------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL----GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL--EDENMDMEEKFGI 465
            D+F AG +T+  TLE+ MAEL+                  SPD                YL+A +KETLRLHP  P LLP  + AD EI G+ VP G +V V+AWA+GRD  TWE P  FMPERF+      ++  KG++   IPFGSGRRICPG+      + +ML +L+  FDW++      + MEE FG+
Sbjct:  328 DMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRTTMGSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGAGVSMEESFGL 520          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.905e-35
Identity = 74/173 (42.77%), Postives = 103/173 (59.54%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F+AG  T++STL WA+ EL+R+                               Y + VVKE  RLHPAVP LLPR+ L+ V+I G+ +P   Q+ +N +AI RD   W NP  F P+RFL S++D+KG NFEL+PFGSGRRICPG+ + I ++   L +L+  FDW L ++
Sbjct:  296 DIFLAGVSTSASTLIWAITELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLPEK 468          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C71AF_ARATH5.852e-3643.23Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH9.983e-3640.66Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH1.304e-3539.68Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH1.304e-3543.93Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN1.703e-3541.40Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71D8_SOYBN1.703e-3540.32Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71BM_ARATH2.224e-3540.44Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH2.905e-3542.25Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71C2_MAIZE2.905e-3541.97Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71BT_ARATH2.905e-3542.77Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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