CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.905e-35
Identity = 74/168 (44.05%), Postives = 102/168 (60.71%), Query Frame = -1
Query:   46 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW 465
            D+F+AG +T++ TL WAMAEL+R+P                              Y + VVKE  RLHPA PLLLPR+ ++ V+I G+ +P   Q+ +N ++I RD   W NP  F P+RFL S++D++G NFEL+PFGSGRRICPG+ L I  + L L +L+  FDW
Sbjct:  302 DIFLAGVNTSAVTLNWAMAELIRNPRVMKKVQDEIRTTLGDKKQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDW 469          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.793e-35
Identity = 79/192 (41.15%), Postives = 113/192 (58.85%), Query Frame = -1
Query:    1 QGFI*QDLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 483
            +GFI  D F AG +T+S+T+ WA++EL+R+P                             YL++V+KETLRLHP  P L+PR++  + E+ G+ +P   ++F+N WAIGRD   WE+P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL     D ++DM E  G+
Sbjct:  289 KGFI-FDTFSAGAETSSTTISWALSELMRNPAKMAKVQAEVREALKGKTVVDLSEVQELKYLRSVLKETLRLHPPFP-LIPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGL 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.793e-35
Identity = 79/192 (41.15%), Postives = 113/192 (58.85%), Query Frame = -1
Query:    1 QGFI*QDLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 483
            +GFI  D F AG +T+S+T+ WA++EL+R+P                             YL++V+KETLRLHP  P L+PR++  + E+ G+ +P   ++F+N WAIGRD   WE+P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL     D ++DM E  G+
Sbjct:  289 KGFI-FDTFSAGAETSSTTISWALSELMRNPAKMAKVQAEVREALKGKTVVDLSEVQELKYLRSVLKETLRLHPPFP-LIPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGL 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 4.954e-35
Identity = 76/186 (40.86%), Postives = 109/186 (58.60%), Query Frame = -1
Query:    4 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 465
            D+F+AG +  ++T+ W + EL R P                              YL+ V+ ET RLHP  PLLLPR  ++D++I G+ +PK   + +N +AIGRD   W+ P  F+PERFL S +D+KG++FEL+PFG+GRRICPG+   I M+ L L +L+  FDW L +    E++DMEE  G
Sbjct:  297 DIFLAGVNGGANTMIWTLTELSRHPRVMKKLQEEIRAMLGPNKERITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEG 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.471e-35
Identity = 74/186 (39.78%), Postives = 108/186 (58.06%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D F AGT+T+S+T  W MAEL+R+P+                            Y+++VVKET+R+HP +PL+ PR    + E+ G+ +P  A++ +N W++GR+ L WE P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL +     +MDM E  G+
Sbjct:  297 DTFSAGTETSSTTTLWVMAELMRNPEVMAKAQAEVRAALKGKTDWDVDDVQELKYMKSVVKETMRMHPPIPLI-PRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGL 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 8.451e-35
Identity = 77/188 (40.96%), Postives = 106/188 (56.38%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED-----ENMDMEEKFGI 465
            ++F+  T TTS+ +EWAM  L+R+P+                            YL+AV+KE LRLHP +PLL+PR    DV++ G+ +  G QV +NAWAI RD  TW  +   F PER   S  DF GRNF+ IPFG+GRR+CPG+ L   M  + L +L+  FDW++ED     +  D+ E  GI
Sbjct:  295 EMFLGSTTTTSAVIEWAMTRLMRNPECLKKLQDEIRSVSKMNSYVSGKEVENMNYLKAVIKEVLRLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDGPSGYDKPDLVEGAGI 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.441e-34
Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = -1
Query:    1 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFGI 477
            F+  D+F+ GT T+S+ LEW M EL+R+P+                             YL+AV+KE  R+HP +PL+LPR    DV++ G+ +  G +V +NAWAI RD   W  +   F PER L S LD+ G++   IPFGSGRRICPG+ LA+ ++ + + +L+  FDW+ E     +  D+ E FG+
Sbjct:  290 FMILDMFIGGTSTSSTLLEWIMTELIRNPNVMKKLQDEIRSTIRPHGSYIKEKDVENMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGL 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.883e-34
Identity = 74/183 (40.44%), Postives = 107/183 (58.47%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 465
            D+ +AG +  + T+ W M EL R P                              YL  V+KE+ RLHP  PLLLPR+ ++D+EI G+ +PK A V +N +AIGRD   W NP  F PERFL +++++KG+++EL+PFG+GRR CPG+ L I +L L L +++  FDW L      +++DMEE
Sbjct:  297 DVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEE 479          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.459e-34
Identity = 72/186 (38.71%), Postives = 108/186 (58.06%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            ++  AG DT++ T+ WAM  LL +P                             Y + V+KET R+ P VP+L+PR A  D++IAG+ VP+   + VN WA+      W++P +F PERF+ +  DFKG NFEL+PFGSGRR+CPG+ + + ++HL L +L+  FDWKL +    E + +EE +G+
Sbjct:  293 NILTAGIDTSAQTMTWAMTHLLANPRVMKKLQAEIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGL 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.211e-34
Identity = 77/185 (41.62%), Postives = 105/185 (56.76%), Query Frame = -1
Query:   19 DLFVAGTDTTSSTLEWAMAELLRSPDA-----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL------EDENMDM 465
            D+ VAGTDT ++ + W M  L++ P                               Y +A+VKETLR+ P +PLL+PR  + D +IAG+ +P G  V VNAWA+ RDE  W  NP  F PERFL   +DFKG ++E IPFGSGRR+CPG+ L   ML +   +L+ SF++KL      +D NMD+
Sbjct:  296 DIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDV 480          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C71B7_ARATH2.905e-3544.05Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71DI_MENSP3.793e-3541.15Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.793e-3541.15Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BZ_ARATH4.954e-3540.86Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI6.471e-3539.78Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71AG_ARATH8.451e-3540.96Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.441e-3438.54Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71BU_ARATH1.883e-3440.44Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR2.459e-3438.71Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C83A1_ARATH3.211e-3441.62Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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