CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.211e-34
Identity = 68/186 (36.56%), Postives = 111/186 (59.68%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFGI 465
            ++ + G  T++ T+ WAM EL+R+P                             YL+ V+ ET RLHP  P L+PR+ +++ E+  +++P   +++VN WAIGRD  TW++P  F+PERF+ S++D KG++FEL+PFGSGRR+CP + +   M+   L +++  FDWK+      E++D+EE  G+
Sbjct:  297 NVLIGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPGL 482          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.194e-34
Identity = 74/186 (39.78%), Postives = 107/186 (57.53%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D F AGT+T+S+T  W MAEL+R+P                             Y+++VVKET+R+HP +P L+PR    + E+ G+ +P  A++ +N W++GR+ L WE P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL +     +MDM E  G+
Sbjct:  294 DTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGL 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.194e-34
Identity = 74/186 (39.78%), Postives = 107/186 (57.53%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D F AGT+T+S+T  W MAEL+R+P                             Y+++VVKET+R+HP +P L+PR    + E+ G+ +P  A++ +N W++GR+ L WE P +F PERF   + DF G +FE IPFG+GRRICPGL   +  + + L  L+  FDWKL +     +MDM E  G+
Sbjct:  294 DTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGL 478          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.478e-34
Identity = 74/186 (39.78%), Postives = 105/186 (56.45%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            D+F AGT+T+S+T  WAM E+L++P                             YL+ V+KET+RLH  +PLL+PR+   + EI G+ +P   +V VN WA+GRD   W++   F PERF   ++DF G NFE +PFG GRRICPG    +   +L L  L+  FDWKL    E +++D+ E  G+
Sbjct:  299 DMFAAGTETSSTTTVWAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGM 484          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.154e-34
Identity = 74/182 (40.66%), Postives = 108/182 (59.34%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDMEEKFGI 465
            DLFVAG DT+  TL+W MAEL R P                             Y++ V+KET RLH   P+L+PR+A+ + +I G+ +  G ++ VNAWAIGR+   W++P  F+PERF+ SN++ KG +FEL+PFGSGRR CP + + +  +   L +L+  FDWK  +E + +EE  G+
Sbjct:  303 DLFVAGVDTSVITLDWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYDDLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKATEE-VSVEEAPGL 483          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.343e-34
Identity = 81/191 (42.41%), Postives = 107/191 (56.02%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDAY----------------------------LQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSN----LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            D+F AGTDT+  TLE+AM EL+R P                               L+AV+KETLRLHP VPLLLP  +L   E+AG+ +P   +V VNAWA+GR    WE    F+PERFL  +    +D K   F+ + FGSGRR+CPG+  A   +  ML +L+  FDW+L    + E++DM E FGI
Sbjct:  333 DMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGI 523          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.343e-34
Identity = 72/170 (42.35%), Postives = 98/170 (57.65%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            D+FVAG    +    W M EL+R+P                              Y + VVKETLRLHP  PLLLPR+ ++ ++I G+ VP   Q+ VN +A+GRD   WEN   F P+RFL S++DFKG+N+E IPFGSGRRICPG+ +   ++ + L +L+  FDW L
Sbjct:  296 DIFVAGIGGVAGITLWGMTELIRNPRVMKKVQDEIRTTLGDKKERIKEEDLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGL 465          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.220e-33
Identity = 78/193 (40.41%), Postives = 100/193 (51.81%), Query Frame = -1
Query:    4 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSN-------LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 465
            D+   GT+TTSS  EW M+EL+R P+A                            Y + VVKE LRLHP +PLLLPR      ++ GF V KG +V VNAWA+ R    W +P  F PERF   +       +D++G  FE IPFGSGRR+CPG    +  L LM+  L+  FDW L D    E +DM+   G
Sbjct:  302 DMLAGGTETTSSAAEWIMSELMRKPEAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVG 494          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.220e-33
Identity = 69/170 (40.59%), Postives = 101/170 (59.41%), Query Frame = -1
Query:   40 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL 465
            D+F+AG +  + T+ WA+ EL R P                              YL+ V++ET RLHP  PLLLPR+ ++DV+I G+ +PK   + +N +AIGRD   W NP  F+PERF+ S +D+KG++FEL+PFG GRRICPG+   + ++ L L +++  FDW L
Sbjct:  297 DVFLAGVNAGAITMIWALTELTRHPRVMKKLQQEIRELLGDNKEKITEQDLEKVHYLKLVIQETFRLHPPAPLLLPRETMSDVKIQGYNIPKNTMIEINTYAIGRDPNCWTNPNEFIPERFVDSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSL 466          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.220e-33
Identity = 73/173 (42.20%), Postives = 102/173 (58.96%), Query Frame = -1
Query:   31 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWE-NPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE 465
            D+F+AGT T+ S LEWAM EL+R+P                             YLQAV+KE LRL P  PL++PR    DV + G+ +P G QV +NAWAI RD  TW  +   F PER L S LDF+G++F+ IPFGSG+RICPG+     ++ + L +++  F+W+++ E
Sbjct:  289 DMFLAGTATSLSFLEWAMTELMRNPKVMKKLQEEIRSSSRQGLFVTEKEAEKMDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHLDSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVE 461          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C71BX_ARATH3.211e-3436.56Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP4.194e-3439.78Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR4.194e-3439.78Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71D6_SOLCH5.478e-3439.78Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71B6_ARATH7.154e-3440.66Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71C4_MAIZE9.343e-3442.41Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BF_ARATH9.343e-3442.35Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.220e-3340.41Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71BL_ARATH1.220e-3340.59Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH1.220e-3342.20Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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